RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 CENPJQ9HC77 1338 aaPredicted RBP17.65■□□□□ 0.42
CLNS1A-201ENST00000263309 ROBO2Q9HCK4 1378 aa17.65■□□□□ 0.42
CLNS1A-201ENST00000263309 TECPR2O15040 1411 aa17.64■□□□□ 0.42
CLNS1A-201ENST00000263309 DCCP43146 1447 aa17.64■□□□□ 0.41
CLNS1A-201ENST00000263309 NBPF8Q3BBV2 869 aa17.63■□□□□ 0.41
CLNS1A-201ENST00000263309 RGS17Q9UGC6 210 aaPredicted RBP17.63■□□□□ 0.41
CLNS1A-201ENST00000263309 KIAA1210Q9ULL0 1709 aa17.63■□□□□ 0.41
CLNS1A-201ENST00000263309 ADGRL3Q9HAR2 1447 aa17.62■□□□□ 0.41
CLNS1A-201ENST00000263309 MINK1Q8N4C8 1332 aaPredicted RBP17.61■□□□□ 0.41
CLNS1A-201ENST00000263309 DLC1Q96QB1 1528 aa17.61■□□□□ 0.41
CLNS1A-201ENST00000263309 SRPK2P78362 688 aaKnown RBP17.6■□□□□ 0.41
CLNS1A-201ENST00000263309 CDCA8Q53HL2 280 aa17.6■□□□□ 0.41
CLNS1A-201ENST00000263309 ESCO1Q5FWF5 840 aa17.6■□□□□ 0.41
CLNS1A-201ENST00000263309 EVC2Q86UK5 1308 aa17.6■□□□□ 0.41
CLNS1A-201ENST00000263309 XRN1Q8IZH2 1706 aaKnown RBP17.58■□□□□ 0.41
CLNS1A-201ENST00000263309 WASLO00401 505 aaPredicted RBP17.58■□□□□ 0.4
CLNS1A-201ENST00000263309 EIF4G2P78344 907 aaKnown RBP eCLIP17.57■□□□□ 0.4
CLNS1A-201ENST00000263309 HIRIP3Q9BW71 556 aaPredicted RBP17.57■□□□□ 0.4
CLNS1A-201ENST00000263309 PSME1Q06323 249 aa17.56■□□□□ 0.4
CLNS1A-201ENST00000263309 ADGRB1O14514 1584 aa17.56■□□□□ 0.4
CLNS1A-201ENST00000263309 RALGAPBQ86X10 1494 aa17.56■□□□□ 0.4
CLNS1A-201ENST00000263309 CDK19Q9BWU1 502 aa17.55■□□□□ 0.4
CLNS1A-201ENST00000263309 GPRASP1Q5JY77 1395 aa17.54■□□□□ 0.4
CLNS1A-201ENST00000263309 NUTM2FA1L443 756 aa17.54■□□□□ 0.4
CLNS1A-201ENST00000263309 TMF1P82094 1093 aa17.54■□□□□ 0.4
CLNS1A-201ENST00000263309 SETD1AO15047 1707 aaKnown RBP17.54■□□□□ 0.4
CLNS1A-201ENST00000263309 KNDC1Q76NI1 1749 aa17.54■□□□□ 0.4
CLNS1A-201ENST00000263309 XIRP1Q702N8 1843 aaKnown RBP17.53■□□□□ 0.4
CLNS1A-201ENST00000263309 PLEKHH1Q9ULM0 1364 aa17.53■□□□□ 0.4
CLNS1A-201ENST00000263309 TRPM1Q7Z4N2 1603 aa17.52■□□□□ 0.4
CLNS1A-201ENST00000263309 NGDNQ8NEJ9 315 aaKnown RBP17.52■□□□□ 0.4
CLNS1A-201ENST00000263309 NPHP3Q7Z494 1330 aa17.51■□□□□ 0.39
CLNS1A-201ENST00000263309 LRRC59Q96AG4 307 aaKnown RBP17.51■□□□□ 0.39
CLNS1A-201ENST00000263309 CCDC61Q9Y6R9 512 aa17.51■□□□□ 0.39
CLNS1A-201ENST00000263309 ASXL1Q8IXJ9 1541 aa17.51■□□□□ 0.39
CLNS1A-201ENST00000263309 ST20-MTHFSA0A0A6YYL1 179 aa17.5■□□□□ 0.39
CLNS1A-201ENST00000263309 NUDT16Q96DE0 195 aaKnown RBP17.5■□□□□ 0.39
CLNS1A-201ENST00000263309 PHF8Q9UPP1 1060 aa17.5■□□□□ 0.39
CLNS1A-201ENST00000263309 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.5■□□□□ 0.39
CLNS1A-201ENST00000263309 BRINP3Q76B58 766 aa17.49■□□□□ 0.39
CLNS1A-201ENST00000263309 POTEAQ6S8J7 498 aa17.48■□□□□ 0.39
CLNS1A-201ENST00000263309 PUS7Q96PZ0 661 aaKnown RBP17.48■□□□□ 0.39
CLNS1A-201ENST00000263309 USP47Q96K76 1375 aa17.48■□□□□ 0.39
CLNS1A-201ENST00000263309 ANKARQ7Z5J8 1434 aa17.47■□□□□ 0.39
CLNS1A-201ENST00000263309 C1orf167Q5SNV9 1468 aa17.47■□□□□ 0.39
CLNS1A-201ENST00000263309 MST1RQ04912 1400 aa17.47■□□□□ 0.39
CLNS1A-201ENST00000263309 CDC42BPGQ6DT37 1551 aa17.46■□□□□ 0.39
CLNS1A-201ENST00000263309 ORAI2Q96SN7 254 aa17.46■□□□□ 0.39
CLNS1A-201ENST00000263309 ZNF692Q9BU19 519 aaPredicted RBP17.46■□□□□ 0.39
CLNS1A-201ENST00000263309 ATAD2Q6PL18 1390 aa17.45■□□□□ 0.38
CLNS1A-201ENST00000263309 FOXO3O43524 673 aa17.45■□□□□ 0.38
CLNS1A-201ENST00000263309 TMC1Q8TDI8 760 aa17.45■□□□□ 0.38
CLNS1A-201ENST00000263309 CABP2Q9NPB3 220 aa17.45■□□□□ 0.38
CLNS1A-201ENST00000263309 SBNO2Q9Y2G9 1366 aa17.44■□□□□ 0.38
CLNS1A-201ENST00000263309 HDGFL2Q7Z4V5 671 aaPredicted RBP17.44■□□□□ 0.38
CLNS1A-201ENST00000263309 TERF2IPQ9NYB0 399 aa17.44■□□□□ 0.38
CLNS1A-201ENST00000263309 ROBO1Q9Y6N7 1651 aa17.43■□□□□ 0.38
CLNS1A-201ENST00000263309 HAP1P54257 671 aaPredicted RBP17.43■□□□□ 0.38
CLNS1A-201ENST00000263309 LMOD2Q6P5Q4 547 aa17.43■□□□□ 0.38
CLNS1A-201ENST00000263309 KRT28Q7Z3Y7 464 aa17.43■□□□□ 0.38
CLNS1A-201ENST00000263309 PMFBP1Q8TBY8 1022 aa17.43■□□□□ 0.38
CLNS1A-201ENST00000263309 PAK3O75914 559 aaPredicted RBP17.42■□□□□ 0.38
CLNS1A-201ENST00000263309 POLR3GLQ9BT43 218 aa17.41■□□□□ 0.38
CLNS1A-201ENST00000263309 NALCNQ8IZF0 1738 aa17.41■□□□□ 0.38
CLNS1A-201ENST00000263309 ARHGEF28Q8N1W1 1705 aaKnown RBP17.41■□□□□ 0.38
CLNS1A-201ENST00000263309 CABP1Q9NZU7 370 aa17.4■□□□□ 0.38
CLNS1A-201ENST00000263309 TULP4Q9NRJ4 1543 aa17.39■□□□□ 0.37
CLNS1A-201ENST00000263309 PLEKHG3A1L390 1219 aa17.39■□□□□ 0.37
CLNS1A-201ENST00000263309 HSPA5P11021 654 aaKnown RBP17.39■□□□□ 0.37
CLNS1A-201ENST00000263309 ADGRB2O60241 1585 aa17.39■□□□□ 0.37
CLNS1A-201ENST00000263309 JCADQ9P266 1359 aa17.38■□□□□ 0.37
CLNS1A-201ENST00000263309 MEX3CQ5U5Q3 659 aaKnown RBP17.37■□□□□ 0.37
CLNS1A-201ENST00000263309 NINLQ9Y2I6 1382 aa17.37■□□□□ 0.37
CLNS1A-201ENST00000263309 QRICH2Q9H0J4 1663 aa17.36■□□□□ 0.37
CLNS1A-201ENST00000263309 ACEP12821 1306 aa17.36■□□□□ 0.37
CLNS1A-201ENST00000263309 BRD4O60885 1362 aaPredicted RBP17.36■□□□□ 0.37
CLNS1A-201ENST00000263309 PPIP5K1Q6PFW1 1433 aa17.36■□□□□ 0.37
CLNS1A-201ENST00000263309 SPATA31A6Q5VVP1 1343 aa17.35■□□□□ 0.37
CLNS1A-201ENST00000263309 SOS2Q07890 1332 aaPredicted RBP17.34■□□□□ 0.37
CLNS1A-201ENST00000263309 TESK2Q96S53 571 aa17.34■□□□□ 0.37
CLNS1A-201ENST00000263309 FMN2Q9NZ56 1722 aa17.34■□□□□ 0.37
CLNS1A-201ENST00000263309 KIF1AQ12756 1690 aa17.33■□□□□ 0.37
CLNS1A-201ENST00000263309 ARHGEF10O15013 1369 aa17.33■□□□□ 0.36
CLNS1A-201ENST00000263309 XPCQ01831 940 aaPredicted RBP17.32■□□□□ 0.36
CLNS1A-201ENST00000263309 ABTB2Q8N961 1025 aa17.32■□□□□ 0.36
CLNS1A-201ENST00000263309 SBNO1A3KN83 1393 aa17.31■□□□□ 0.36
CLNS1A-201ENST00000263309 PRR36Q9H6K5 1346 aa17.31■□□□□ 0.36
CLNS1A-201ENST00000263309 NLRP13Q86W25 1043 aa17.31■□□□□ 0.36
CLNS1A-201ENST00000263309 DDX17Q92841 729 aaKnown RBP17.31■□□□□ 0.36
CLNS1A-201ENST00000263309 PHLPP1O60346 1717 aa17.3■□□□□ 0.36
CLNS1A-201ENST00000263309 COL16A1Q07092 1604 aaPredicted RBP17.3■□□□□ 0.36
CLNS1A-201ENST00000263309 NUTM2BA6NNL0 878 aaPredicted RBP17.3■□□□□ 0.36
CLNS1A-201ENST00000263309 NUTM2EB1AL46 878 aaPredicted RBP17.3■□□□□ 0.36
CLNS1A-201ENST00000263309 NUTM2AQ8IVF1 878 aaPredicted RBP17.3■□□□□ 0.36
CLNS1A-201ENST00000263309 ITSN1Q15811 1721 aa17.3■□□□□ 0.36
CLNS1A-201ENST00000263309 KTN1Q86UP2 1357 aaKnown RBP17.29■□□□□ 0.36
CLNS1A-201ENST00000263309 LRP6O75581 1613 aa17.29■□□□□ 0.36
CLNS1A-201ENST00000263309 AHDC1Q5TGY3 1603 aaPredicted RBP17.29■□□□□ 0.36
CLNS1A-201ENST00000263309 SPATA31A3Q5VYP0 1347 aa17.29■□□□□ 0.36
CLNS1A-201ENST00000263309 SLC12A5Q9H2X9 1139 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms