RNA–Protein interactions for RNA: ENST00000258418.9

CAB39-201, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 3,826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-201ENST00000258418 HSCBQ8IWL3 235 aa18.58■□□□□ 0.57
CAB39-201ENST00000258418 PNNQ9H307 717 aaKnown RBP18.58■□□□□ 0.57
CAB39-201ENST00000258418 NOB1Q9ULX3 412 aaKnown RBP18.58■□□□□ 0.57
CAB39-201ENST00000258418 CD109Q6YHK3 1445 aa18.58■□□□□ 0.56
CAB39-201ENST00000258418 ERCC6L2Q5T890 1561 aa18.57■□□□□ 0.56
CAB39-201ENST00000258418 PLA2R1Q13018 1463 aa18.57■□□□□ 0.56
CAB39-201ENST00000258418 RARSP54136 660 aaKnown RBP18.57■□□□□ 0.56
CAB39-201ENST00000258418 DCTN1Q14203 1278 aa18.57■□□□□ 0.56
CAB39-201ENST00000258418 SHANK2Q9UPX8 1470 aa18.56■□□□□ 0.56
CAB39-201ENST00000258418 NGDNQ8NEJ9 315 aaKnown RBP18.56■□□□□ 0.56
CAB39-201ENST00000258418 COG3Q96JB2 828 aa18.56■□□□□ 0.56
CAB39-201ENST00000258418 RLBP1P12271 317 aa18.55■□□□□ 0.56
CAB39-201ENST00000258418 COL17A1Q9UMD9 1497 aaPredicted RBP18.55■□□□□ 0.56
CAB39-201ENST00000258418 NOL8Q76FK4 1167 aaKnown RBP18.55■□□□□ 0.56
CAB39-201ENST00000258418 ANO8Q9HCE9 1232 aaPredicted RBP18.55■□□□□ 0.56
CAB39-201ENST00000258418 ZNF428Q96B54 188 aa18.54■□□□□ 0.56
CAB39-201ENST00000258418 RNF123Q5XPI4 1314 aa18.54■□□□□ 0.56
CAB39-201ENST00000258418 RTF1Q92541 710 aaKnown RBP18.54■□□□□ 0.56
CAB39-201ENST00000258418 ARHGEF12Q9NZN5 1544 aa18.54■□□□□ 0.56
CAB39-201ENST00000258418 KDM5CP41229 1560 aa18.54■□□□□ 0.56
CAB39-201ENST00000258418 TMPOP42166 694 aaKnown RBP18.53■□□□□ 0.56
CAB39-201ENST00000258418 GSE1Q14687 1217 aa18.53■□□□□ 0.56
CAB39-201ENST00000258418 SLC26A8Q96RN1 970 aa18.53■□□□□ 0.56
CAB39-201ENST00000258418 SSH1Q8WYL5 1049 aa18.53■□□□□ 0.56
CAB39-201ENST00000258418 C14orf93Q9H972 538 aaKnown RBP18.53■□□□□ 0.56
CAB39-201ENST00000258418 DUOX2Q9NRD8 1548 aa18.53■□□□□ 0.56
CAB39-201ENST00000258418 PDE3AQ14432 1141 aa18.53■□□□□ 0.56
CAB39-201ENST00000258418 SAMD9LQ8IVG5 1584 aa18.52■□□□□ 0.56
CAB39-201ENST00000258418 PCDHB15Q9Y5E8 787 aa18.52■□□□□ 0.56
CAB39-201ENST00000258418 FOXD4L5Q5VV16 416 aaPredicted RBP18.52■□□□□ 0.56
CAB39-201ENST00000258418 FOXD4L4Q8WXT5 416 aaPredicted RBP18.52■□□□□ 0.56
CAB39-201ENST00000258418 EMILIN1Q9Y6C2 1016 aa18.52■□□□□ 0.56
CAB39-201ENST00000258418 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.52■□□□□ 0.552e-7■■■□□ 17.5
CAB39-201ENST00000258418 ABCA8O94911 1581 aa18.51■□□□□ 0.55
CAB39-201ENST00000258418 ASXL2Q76L83 1435 aa18.51■□□□□ 0.55
CAB39-201ENST00000258418 ZRANB1Q9UGI0 708 aa18.51■□□□□ 0.55
CAB39-201ENST00000258418 MAGI2Q86UL8 1455 aa18.51■□□□□ 0.55
CAB39-201ENST00000258418 AMPHP49418 695 aa18.51■□□□□ 0.55
CAB39-201ENST00000258418 NCKAP5LQ9HCH0 1330 aa18.5■□□□□ 0.55
CAB39-201ENST00000258418 DDX19BQ9UMR2 479 aa18.5■□□□□ 0.55
CAB39-201ENST00000258418 NME9Q86XW9 330 aa18.5■□□□□ 0.55
CAB39-201ENST00000258418 TMEM57Q8N5G2 664 aa18.5■□□□□ 0.55
CAB39-201ENST00000258418 SEC24BO95487 1268 aa18.49■□□□□ 0.55
CAB39-201ENST00000258418 UGGT1Q9NYU2 1555 aa18.49■□□□□ 0.55
CAB39-201ENST00000258418 TTC37Q6PGP7 1564 aa18.48■□□□□ 0.55
CAB39-201ENST00000258418 MIS18AQ9NYP9 233 aa18.48■□□□□ 0.55
CAB39-201ENST00000258418 NKTRP30414 1462 aaKnown RBP18.48■□□□□ 0.55
CAB39-201ENST00000258418 RBM33Q96EV2 1170 aaKnown RBP18.48■□□□□ 0.55
CAB39-201ENST00000258418 MVPQ14764 893 aaKnown RBP18.47■□□□□ 0.55
CAB39-201ENST00000258418 A0A0G2JS52 829 aa18.46■□□□□ 0.55
CAB39-201ENST00000258418 FAM83GA6ND36 823 aa18.46■□□□□ 0.55
CAB39-201ENST00000258418 FOXD4L6Q3SYB3 417 aaPredicted RBP18.46■□□□□ 0.55
CAB39-201ENST00000258418 FOXD4L3Q6VB84 417 aaPredicted RBP18.46■□□□□ 0.55
CAB39-201ENST00000258418 ABCC2Q92887 1545 aa18.45■□□□□ 0.54
CAB39-201ENST00000258418 HDGFP51858 240 aaKnown RBP18.45■□□□□ 0.54
CAB39-201ENST00000258418 ATF7IPQ6VMQ6 1270 aa18.45■□□□□ 0.54
CAB39-201ENST00000258418 C22orf23Q9BZE7 217 aa18.45■□□□□ 0.54
CAB39-201ENST00000258418 ADGBQ8N7X0 1667 aa18.45■□□□□ 0.54
CAB39-201ENST00000258418 CDC42BPAQ5VT25 1732 aa18.45■□□□□ 0.54
CAB39-201ENST00000258418 SULT6B1Q6IMI4 303 aa18.45■□□□□ 0.54
CAB39-201ENST00000258418 WDR63Q8IWG1 891 aa18.45■□□□□ 0.54
CAB39-201ENST00000258418 SLC52A1Q9NWF4 448 aa18.45■□□□□ 0.54
CAB39-201ENST00000258418 ASXL1Q8IXJ9 1541 aa18.45■□□□□ 0.54
CAB39-201ENST00000258418 GPRASP1Q5JY77 1395 aa18.44■□□□□ 0.54
CAB39-201ENST00000258418 TRIM27P14373 513 aa18.44■□□□□ 0.54
CAB39-201ENST00000258418 FYB1O15117 783 aa18.44■□□□□ 0.54
CAB39-201ENST00000258418 C8orf34Q49A92 452 aa18.44■□□□□ 0.54
CAB39-201ENST00000258418 NGEFQ8N5V2 710 aa18.43■□□□□ 0.54
CAB39-201ENST00000258418 CEBPAP49715 358 aaPredicted RBP18.43■□□□□ 0.54
CAB39-201ENST00000258418 USP35Q9P2H5 1018 aa18.43■□□□□ 0.54
CAB39-201ENST00000258418 TAOK2Q9UL54 1235 aa18.43■□□□□ 0.54
CAB39-201ENST00000258418 OS9Q13438 667 aaPredicted RBP18.42■□□□□ 0.54
CAB39-201ENST00000258418 CALD1Q05682 793 aaKnown RBP18.42■□□□□ 0.54
CAB39-201ENST00000258418 TWISTNBQ3B726 338 aaPredicted RBP18.41■□□□□ 0.54
CAB39-201ENST00000258418 ANP32BQ92688 251 aaKnown RBP18.41■□□□□ 0.54
CAB39-201ENST00000258418 WDR7Q9Y4E6 1490 aa18.41■□□□□ 0.54
CAB39-201ENST00000258418 EIF2S2P20042 333 aaKnown RBP18.4■□□□□ 0.54
CAB39-201ENST00000258418 TRIM6-TRIM34B2RNG4 842 aa18.4■□□□□ 0.54
CAB39-201ENST00000258418 MCM10Q7L590 875 aa18.39■□□□□ 0.54
CAB39-201ENST00000258418 CASC1Q6TDU7 716 aa18.38■□□□□ 0.53
CAB39-201ENST00000258418 KIF16BQ96L93 1317 aa18.38■□□□□ 0.53
CAB39-201ENST00000258418 EID1Q9Y6B2 187 aa18.38■□□□□ 0.53
CAB39-201ENST00000258418 GOLGA6L22H0YM25 854 aa18.37■□□□□ 0.53
CAB39-201ENST00000258418 TRIM44Q96DX7 344 aaPredicted RBP18.37■□□□□ 0.53
CAB39-201ENST00000258418 STK31Q9BXU1 1019 aa18.37■□□□□ 0.53
CAB39-201ENST00000258418 ATP10AO60312 1499 aa18.37■□□□□ 0.53
CAB39-201ENST00000258418 GNAI1P63096 354 aa18.37■□□□□ 0.53
CAB39-201ENST00000258418 NUDT16Q96DE0 195 aaKnown RBP18.37■□□□□ 0.53
CAB39-201ENST00000258418 CHMP4BQ9H444 224 aaKnown RBP18.37■□□□□ 0.53
CAB39-201ENST00000258418 RPGRIP1LQ68CZ1 1315 aa18.37■□□□□ 0.53
CAB39-201ENST00000258418 KDM5DQ9BY66 1539 aa18.36■□□□□ 0.53
CAB39-201ENST00000258418 RTEL1-TNFRSF6BF6WH68 1400 aa18.35■□□□□ 0.53
CAB39-201ENST00000258418 KRT24Q2M2I5 525 aa18.35■□□□□ 0.53
CAB39-201ENST00000258418 RILPL2Q969X0 211 aa18.35■□□□□ 0.53
CAB39-201ENST00000258418 PHACTR3Q96KR7 559 aa18.35■□□□□ 0.53
CAB39-201ENST00000258418 NLRP6P59044 892 aa18.35■□□□□ 0.53
CAB39-201ENST00000258418 LMOD3Q0VAK6 560 aa18.34■□□□□ 0.53
CAB39-201ENST00000258418 MAST1Q9Y2H9 1570 aa18.34■□□□□ 0.53
CAB39-201ENST00000258418 TSPYL4Q9UJ04 414 aa18.34■□□□□ 0.53
CAB39-201ENST00000258418 TSPYL6Q8N831 410 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms