RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 FAM69CQ0P6D2 419 aa21.73■■□□□ 1.07
UBQLN1-201ENST00000257468 POLR3AO14802 1390 aaPredicted RBP21.72■■□□□ 1.07
UBQLN1-201ENST00000257468 SHPRHQ149N8 1683 aa21.72■■□□□ 1.07
UBQLN1-201ENST00000257468 STK26Q9P289 416 aa21.72■■□□□ 1.07
UBQLN1-201ENST00000257468 CABP2Q9NPB3 220 aa21.71■■□□□ 1.07
UBQLN1-201ENST00000257468 PREX1Q8TCU6 1659 aa21.71■■□□□ 1.07
UBQLN1-201ENST00000257468 TRMT2AQ8IZ69 625 aaKnown RBP21.71■■□□□ 1.07
UBQLN1-201ENST00000257468 EVC2Q86UK5 1308 aa21.7■■□□□ 1.06
UBQLN1-201ENST00000257468 KIF13AQ9H1H9 1805 aa21.69■■□□□ 1.06
UBQLN1-201ENST00000257468 FBXO31Q5XUX0 539 aaPredicted RBP21.69■■□□□ 1.06
UBQLN1-201ENST00000257468 REREQ9P2R6 1566 aa21.69■■□□□ 1.06
UBQLN1-201ENST00000257468 TMEM131LA2VDJ0 1609 aa21.67■■□□□ 1.06
UBQLN1-201ENST00000257468 TCERG1O14776 1098 aaKnown RBP21.67■■□□□ 1.06
UBQLN1-201ENST00000257468 SLC52A1Q9NWF4 448 aa21.67■■□□□ 1.06
UBQLN1-201ENST00000257468 TSPOAP1O95153 1857 aa21.67■■□□□ 1.06
UBQLN1-201ENST00000257468 USP32Q8NFA0 1604 aa21.67■■□□□ 1.06
UBQLN1-201ENST00000257468 NKTRP30414 1462 aaKnown RBP21.66■■□□□ 1.06
UBQLN1-201ENST00000257468 CGNL1Q0VF96 1302 aa21.66■■□□□ 1.06
UBQLN1-201ENST00000257468 PAK3O75914 559 aaPredicted RBP21.66■■□□□ 1.06
UBQLN1-201ENST00000257468 BCAR3O75815 825 aa21.65■■□□□ 1.06
UBQLN1-201ENST00000257468 MTHFSP49914 203 aa21.65■■□□□ 1.06
UBQLN1-201ENST00000257468 NEUROD2Q15784 382 aa21.65■■□□□ 1.06
UBQLN1-201ENST00000257468 RRP7AQ9Y3A4 280 aaKnown RBP21.65■■□□□ 1.06
UBQLN1-201ENST00000257468 ANKRD36BQ8N2N9 1353 aa21.64■■□□□ 1.05
UBQLN1-201ENST00000257468 E9PSI1 815 aa21.64■■□□□ 1.05
UBQLN1-201ENST00000257468 ANP32AP39687 249 aaKnown RBP21.63■■□□□ 1.05
UBQLN1-201ENST00000257468 NOP58Q9Y2X3 529 aaKnown RBP21.63■■□□□ 1.05
UBQLN1-201ENST00000257468 ZFYVE9O95405 1425 aa21.63■■□□□ 1.05
UBQLN1-201ENST00000257468 WWC1Q8IX03 1113 aa21.63■■□□□ 1.05
UBQLN1-201ENST00000257468 PDE4AP27815 886 aa21.62■■□□□ 1.05
UBQLN1-201ENST00000257468 AGLP35573 1532 aa21.61■■□□□ 1.05
UBQLN1-201ENST00000257468 SRPK2P78362 688 aaKnown RBP21.6■■□□□ 1.05
UBQLN1-201ENST00000257468 NPM2Q86SE8 214 aaKnown RBP21.6■■□□□ 1.05
UBQLN1-201ENST00000257468 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.6■■□□□ 1.05
UBQLN1-201ENST00000257468 MINK1Q8N4C8 1332 aaPredicted RBP21.6■■□□□ 1.05
UBQLN1-201ENST00000257468 KDM2BQ8NHM5 1336 aa21.6■■□□□ 1.05
UBQLN1-201ENST00000257468 PTPRMP28827 1452 aa21.6■■□□□ 1.05
UBQLN1-201ENST00000257468 A0A1W2PP64 1363 aa21.59■■□□□ 1.05
UBQLN1-201ENST00000257468 PRAM1Q96QH2 718 aa21.59■■□□□ 1.05
UBQLN1-201ENST00000257468 TCP11L2Q8N4U5 519 aa21.58■■□□□ 1.05
UBQLN1-201ENST00000257468 RUNDC1Q96C34 613 aa21.58■■□□□ 1.05
UBQLN1-201ENST00000257468 IPO9Q96P70 1041 aaKnown RBP21.58■■□□□ 1.05
UBQLN1-201ENST00000257468 PUS7Q96PZ0 661 aaKnown RBP21.58■■□□□ 1.05
UBQLN1-201ENST00000257468 IQSEC2Q5JU85 1478 aa21.58■■□□□ 1.05
UBQLN1-201ENST00000257468 BACH2Q9BYV9 841 aa21.58■■□□□ 1.04
UBQLN1-201ENST00000257468 MS4A1P11836 297 aa21.57■■□□□ 1.04
UBQLN1-201ENST00000257468 YTHDC2Q9H6S0 1430 aaKnown RBP21.56■■□□□ 1.04
UBQLN1-201ENST00000257468 NGEFQ8N5V2 710 aa21.55■■□□□ 1.04
UBQLN1-201ENST00000257468 CFAP53Q96M91 514 aa21.55■■□□□ 1.04
UBQLN1-201ENST00000257468 GGNBP2Q9H3C7 697 aa21.54■■□□□ 1.04
UBQLN1-201ENST00000257468 POGKQ9P215 609 aa21.54■■□□□ 1.04
UBQLN1-201ENST00000257468 STAG3Q9UJ98 1225 aa21.54■■□□□ 1.04
UBQLN1-201ENST00000257468 NSD2O96028 1365 aa21.54■■□□□ 1.04
UBQLN1-201ENST00000257468 CLTCQ00610 1675 aaKnown RBP21.53■■□□□ 1.04
UBQLN1-201ENST00000257468 ALKQ9UM73 1620 aa21.53■■□□□ 1.04
UBQLN1-201ENST00000257468 MLECQ14165 292 aa21.53■■□□□ 1.04
UBQLN1-201ENST00000257468 CENPQQ7L2Z9 268 aaPredicted RBP21.53■■□□□ 1.04
UBQLN1-201ENST00000257468 ABCC11Q96J66 1382 aa21.53■■□□□ 1.04
UBQLN1-201ENST00000257468 ARHGEF40Q8TER5 1519 aa21.52■■□□□ 1.03
UBQLN1-201ENST00000257468 U2AF1L5P0DN76 240 aaPredicted RBP21.51■■□□□ 1.03
UBQLN1-201ENST00000257468 U2AF1Q01081 240 aaKnown RBP eCLIP21.51■■□□□ 1.035e-6■■□□□ 12.9
UBQLN1-201ENST00000257468 CD163L1Q9NR16 1453 aa21.5■■□□□ 1.03
UBQLN1-201ENST00000257468 PPP6R1Q9UPN7 881 aa21.5■■□□□ 1.03
UBQLN1-201ENST00000257468 PHF23Q9BUL5 403 aaPredicted RBP21.49■■□□□ 1.03
UBQLN1-201ENST00000257468 ZBTB47Q9UFB7 747 aaPredicted RBP21.49■■□□□ 1.03
UBQLN1-201ENST00000257468 ATAD2Q6PL18 1390 aa21.48■■□□□ 1.03
UBQLN1-201ENST00000257468 PANK1Q8TE04 598 aa21.48■■□□□ 1.03
UBQLN1-201ENST00000257468 NINLQ9Y2I6 1382 aa21.47■■□□□ 1.03
UBQLN1-201ENST00000257468 FYB1O15117 783 aa21.46■■□□□ 1.03
UBQLN1-201ENST00000257468 CANXP27824 592 aaKnown RBP21.46■■□□□ 1.03
UBQLN1-201ENST00000257468 CDK19Q9BWU1 502 aa21.46■■□□□ 1.03
UBQLN1-201ENST00000257468 FRAT1Q92837 279 aaPredicted RBP21.46■■□□□ 1.03
UBQLN1-201ENST00000257468 A2ML1A8K2U0 1454 aa21.45■■□□□ 1.02
UBQLN1-201ENST00000257468 NBR1Q14596 966 aa21.45■■□□□ 1.02
UBQLN1-201ENST00000257468 TERF2IPQ9NYB0 399 aa21.45■■□□□ 1.02
UBQLN1-201ENST00000257468 COG6Q9Y2V7 657 aa21.45■■□□□ 1.02
UBQLN1-201ENST00000257468 NLRP1Q9C000 1473 aa21.45■■□□□ 1.02
UBQLN1-201ENST00000257468 U2SURPO15042 1029 aaKnown RBP21.44■■□□□ 1.02
UBQLN1-201ENST00000257468 WAPLQ7Z5K2 1190 aa21.44■■□□□ 1.02
UBQLN1-201ENST00000257468 BCL2L13Q9BXK5 485 aa21.44■■□□□ 1.02
UBQLN1-201ENST00000257468 RARSP54136 660 aaKnown RBP21.44■■□□□ 1.02
UBQLN1-201ENST00000257468 WDR63Q8IWG1 891 aa21.44■■□□□ 1.02
UBQLN1-201ENST00000257468 CABP1Q9NZU7 370 aa21.44■■□□□ 1.02
UBQLN1-201ENST00000257468 RGS3P49796 1198 aa21.43■■□□□ 1.02
UBQLN1-201ENST00000257468 TNNQ9UQP3 1299 aa21.43■■□□□ 1.02
UBQLN1-201ENST00000257468 ADGRB2O60241 1585 aa21.43■■□□□ 1.02
UBQLN1-201ENST00000257468 COL3A1P02461 1466 aaPredicted RBP21.43■■□□□ 1.02
UBQLN1-201ENST00000257468 ANKRD26Q9UPS8 1709 aa21.42■■□□□ 1.02
UBQLN1-201ENST00000257468 SPATA31D1Q6ZQQ2 1576 aa21.42■■□□□ 1.02
UBQLN1-201ENST00000257468 IGHDP01880 384 aa21.42■■□□□ 1.02
UBQLN1-201ENST00000257468 RIMS2Q9UQ26 1411 aa21.42■■□□□ 1.02
UBQLN1-201ENST00000257468 PDE3AQ14432 1141 aa21.41■■□□□ 1.02
UBQLN1-201ENST00000257468 CCDC27Q2M243 656 aa21.41■■□□□ 1.02
UBQLN1-201ENST00000257468 SETD1AO15047 1707 aaKnown RBP21.4■■□□□ 1.02
UBQLN1-201ENST00000257468 HDGFL2Q7Z4V5 671 aaPredicted RBP21.39■■□□□ 1.02
UBQLN1-201ENST00000257468 FBLN1P23142 703 aa21.39■■□□□ 1.01
UBQLN1-201ENST00000257468 PLEKHF1Q96S99 279 aa21.39■■□□□ 1.01
UBQLN1-201ENST00000257468 RLBP1P12271 317 aa21.38■■□□□ 1.01
UBQLN1-201ENST00000257468 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.38■■□□□ 1.01
UBQLN1-201ENST00000257468 TSR2Q969E8 191 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms