RNA–Protein interactions for RNA: ENST00000256001.12

ACTR3B-201, Transcript of ARP3 actin related protein 3 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR3B, Length 2,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3B-201ENST00000256001 ARHGEF40Q8TER5 1519 aa33.97■■■■□ 3.03
ACTR3B-201ENST00000256001 CGNL1Q0VF96 1302 aa33.96■■■■□ 3.03
ACTR3B-201ENST00000256001 TNNT2P45379 298 aaPredicted RBP33.95■■■■□ 3.03
ACTR3B-201ENST00000256001 YTHDC2Q9H6S0 1430 aaKnown RBP33.95■■■■□ 3.03
ACTR3B-201ENST00000256001 SPATA31D1Q6ZQQ2 1576 aa33.95■■■■□ 3.02
ACTR3B-201ENST00000256001 ANKRD36BQ8N2N9 1353 aa33.94■■■■□ 3.02
ACTR3B-201ENST00000256001 PTPRMP28827 1452 aa33.94■■■■□ 3.02
ACTR3B-201ENST00000256001 POLR3AO14802 1390 aaPredicted RBP33.94■■■■□ 3.02
ACTR3B-201ENST00000256001 PRAM1Q96QH2 718 aa33.94■■■■□ 3.02
ACTR3B-201ENST00000256001 ZNF521Q96K83 1311 aa33.93■■■■□ 3.02
ACTR3B-201ENST00000256001 ALKQ9UM73 1620 aa33.93■■■■□ 3.02
ACTR3B-201ENST00000256001 SRPK2P78362 688 aaKnown RBP33.92■■■■□ 3.02
ACTR3B-201ENST00000256001 POGKQ9P215 609 aa33.92■■■■□ 3.02
ACTR3B-201ENST00000256001 USP32Q8NFA0 1604 aa33.92■■■■□ 3.02
ACTR3B-201ENST00000256001 A2ML1A8K2U0 1454 aa33.91■■■■□ 3.02
ACTR3B-201ENST00000256001 GOLGA2Q08379 1002 aa33.9■■■■□ 3.02
ACTR3B-201ENST00000256001 MINK1Q8N4C8 1332 aaPredicted RBP33.9■■■■□ 3.02
ACTR3B-201ENST00000256001 APAF1O14727 1248 aa33.89■■■■□ 3.02
ACTR3B-201ENST00000256001 ESF1Q9H501 851 aaKnown RBP33.89■■■■□ 3.02
ACTR3B-201ENST00000256001 EXOC6Q8TAG9 804 aa33.88■■■■□ 3.01
ACTR3B-201ENST00000256001 DUSP27Q5VZP5 1158 aa33.86■■■■□ 3.01
ACTR3B-201ENST00000256001 RIMS2Q9UQ26 1411 aa33.85■■■■□ 3.01
ACTR3B-201ENST00000256001 NINLQ9Y2I6 1382 aa33.84■■■■□ 3.01
ACTR3B-201ENST00000256001 ZMYM3Q14202 1370 aa33.83■■■■□ 3.01
ACTR3B-201ENST00000256001 PLIN1O60240 522 aa33.83■■■■□ 3.01
ACTR3B-201ENST00000256001 NSD2O96028 1365 aa33.82■■■■□ 3
ACTR3B-201ENST00000256001 A0A1W2PP64 1363 aa33.81■■■■□ 3
ACTR3B-201ENST00000256001 ATAD2Q6PL18 1390 aa33.81■■■■□ 3
ACTR3B-201ENST00000256001 MTHFSP49914 203 aa33.8■■■■□ 3
ACTR3B-201ENST00000256001 SLFN5Q08AF3 891 aa33.8■■■■□ 3
ACTR3B-201ENST00000256001 SHPRHQ149N8 1683 aa33.76■■■■□ 3
ACTR3B-201ENST00000256001 NGEFQ8N5V2 710 aa33.75■■■□□ 2.99
ACTR3B-201ENST00000256001 CFAP53Q96M91 514 aa33.75■■■□□ 2.99
ACTR3B-201ENST00000256001 CDK19Q9BWU1 502 aa33.75■■■□□ 2.99
ACTR3B-201ENST00000256001 TERF2IPQ9NYB0 399 aa33.75■■■□□ 2.99
ACTR3B-201ENST00000256001 ABCC11Q96J66 1382 aa33.74■■■□□ 2.99
ACTR3B-201ENST00000256001 TRMT2AQ8IZ69 625 aaKnown RBP33.73■■■□□ 2.99
ACTR3B-201ENST00000256001 SPINK5Q9NQ38 1064 aaPredicted RBP33.72■■■□□ 2.99
ACTR3B-201ENST00000256001 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.71■■■□□ 2.99
ACTR3B-201ENST00000256001 WAPLQ7Z5K2 1190 aa33.7■■■□□ 2.99
ACTR3B-201ENST00000256001 DLC1Q96QB1 1528 aa33.69■■■□□ 2.98
ACTR3B-201ENST00000256001 GGNBP2Q9H3C7 697 aa33.68■■■□□ 2.98
ACTR3B-201ENST00000256001 SETD1AO15047 1707 aaKnown RBP33.68■■■□□ 2.98
ACTR3B-201ENST00000256001 E9PSI1 815 aa33.68■■■□□ 2.98
ACTR3B-201ENST00000256001 RUNDC1Q96C34 613 aa33.68■■■□□ 2.98
ACTR3B-201ENST00000256001 CD163L1Q9NR16 1453 aa33.67■■■□□ 2.98
ACTR3B-201ENST00000256001 CRBNQ96SW2 442 aa33.67■■■□□ 2.98
ACTR3B-201ENST00000256001 HDGFL2Q7Z4V5 671 aaPredicted RBP33.65■■■□□ 2.98
ACTR3B-201ENST00000256001 TNRQ92752 1358 aa33.65■■■□□ 2.98
ACTR3B-201ENST00000256001 CABP1Q9NZU7 370 aa33.65■■■□□ 2.98
ACTR3B-201ENST00000256001 DMRT2Q9Y5R5 561 aa33.65■■■□□ 2.98
ACTR3B-201ENST00000256001 WWC1Q8IX03 1113 aa33.64■■■□□ 2.98
ACTR3B-201ENST00000256001 FYB1O15117 783 aa33.63■■■□□ 2.97
ACTR3B-201ENST00000256001 C20orf194Q5TEA3 1177 aa33.63■■■□□ 2.97
ACTR3B-201ENST00000256001 NKTRP30414 1462 aaKnown RBP33.63■■■□□ 2.97
ACTR3B-201ENST00000256001 NRXN3Q9Y4C0 1643 aa33.62■■■□□ 2.97
ACTR3B-201ENST00000256001 HDGFP51858 240 aaKnown RBP33.61■■■□□ 2.97
ACTR3B-201ENST00000256001 NEUROD2Q15784 382 aa33.61■■■□□ 2.97
ACTR3B-201ENST00000256001 TCP11L2Q8N4U5 519 aa33.61■■■□□ 2.97
ACTR3B-201ENST00000256001 METP08581 1390 aa33.6■■■□□ 2.97
ACTR3B-201ENST00000256001 RRP7AQ9Y3A4 280 aaKnown RBP33.6■■■□□ 2.97
ACTR3B-201ENST00000256001 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.59■■■□□ 2.97
ACTR3B-201ENST00000256001 U2AF1L5P0DN76 240 aaPredicted RBP33.57■■■□□ 2.97
ACTR3B-201ENST00000256001 U2AF1Q01081 240 aaKnown RBP eCLIP33.57■■■□□ 2.97
ACTR3B-201ENST00000256001 FANCIQ9NVI1 1328 aa33.56■■■□□ 2.96
ACTR3B-201ENST00000256001 MED14O60244 1454 aa33.56■■■□□ 2.96
ACTR3B-201ENST00000256001 IQSEC2Q5JU85 1478 aa33.56■■■□□ 2.96
ACTR3B-201ENST00000256001 NLRP1Q9C000 1473 aa33.55■■■□□ 2.96
ACTR3B-201ENST00000256001 TXNDC2Q86VQ3 553 aa33.55■■■□□ 2.96
ACTR3B-201ENST00000256001 ANKRD26Q9UPS8 1709 aa33.53■■■□□ 2.96
ACTR3B-201ENST00000256001 TMEM2Q9UHN6 1383 aa33.52■■■□□ 2.96
ACTR3B-201ENST00000256001 WASLO00401 505 aaPredicted RBP33.49■■■□□ 2.95
ACTR3B-201ENST00000256001 PHF23Q9BUL5 403 aaPredicted RBP33.49■■■□□ 2.95
ACTR3B-201ENST00000256001 UBR1Q8IWV7 1749 aa33.49■■■□□ 2.95
ACTR3B-201ENST00000256001 BCAR3O75815 825 aa33.48■■■□□ 2.95
ACTR3B-201ENST00000256001 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.48■■■□□ 2.95
ACTR3B-201ENST00000256001 ATP7BP35670 1465 aa33.47■■■□□ 2.95
ACTR3B-201ENST00000256001 U2SURPO15042 1029 aaKnown RBP33.47■■■□□ 2.95
ACTR3B-201ENST00000256001 CCDC27Q2M243 656 aa33.46■■■□□ 2.95
ACTR3B-201ENST00000256001 WDR63Q8IWG1 891 aa33.46■■■□□ 2.95
ACTR3B-201ENST00000256001 COL3A1P02461 1466 aaPredicted RBP33.45■■■□□ 2.94
ACTR3B-201ENST00000256001 KIF20BQ96Q89 1820 aa33.44■■■□□ 2.94
ACTR3B-201ENST00000256001 CEBPAP49715 358 aaPredicted RBP33.44■■■□□ 2.94
ACTR3B-201ENST00000256001 SIRT1Q96EB6 747 aa33.44■■■□□ 2.94
ACTR3B-201ENST00000256001 FAM135BQ49AJ0 1406 aa33.43■■■□□ 2.94
ACTR3B-201ENST00000256001 TECPR2O15040 1411 aa33.42■■■□□ 2.94
ACTR3B-201ENST00000256001 PPIP5K1Q6PFW1 1433 aa33.41■■■□□ 2.94
ACTR3B-201ENST00000256001 KNDC1Q76NI1 1749 aa33.41■■■□□ 2.94
ACTR3B-201ENST00000256001 NCBP3Q53F19 620 aaKnown RBP33.4■■■□□ 2.94
ACTR3B-201ENST00000256001 MSH5O43196 834 aa33.39■■■□□ 2.94
ACTR3B-201ENST00000256001 NUDT16Q96DE0 195 aaKnown RBP33.38■■■□□ 2.93
ACTR3B-201ENST00000256001 TCERG1O14776 1098 aaKnown RBP33.38■■■□□ 2.93
ACTR3B-201ENST00000256001 DIAPH1O60610 1272 aaKnown RBP33.37■■■□□ 2.93
ACTR3B-201ENST00000256001 PLEKHF1Q96S99 279 aa33.37■■■□□ 2.93
ACTR3B-201ENST00000256001 ADGRB2O60241 1585 aa33.37■■■□□ 2.93
ACTR3B-201ENST00000256001 CPS1P31327 1500 aa33.37■■■□□ 2.93
ACTR3B-201ENST00000256001 LTKP29376 864 aa33.37■■■□□ 2.93
ACTR3B-201ENST00000256001 CPSF1Q10570 1443 aaKnown RBP33.37■■■□□ 2.93
ACTR3B-201ENST00000256001 ADAMTS13Q76LX8 1427 aa33.36■■■□□ 2.93
ACTR3B-201ENST00000256001 PNPLA6Q8IY17 1366 aa33.35■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms