RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 FRAT2O75474 233 aaPredicted RBP23.65■■□□□ 1.38
PPFIA1-201ENST00000253925 WWC1Q8IX03 1113 aa23.65■■□□□ 1.38
PPFIA1-201ENST00000253925 CSB-PGBD3P0DP91 1061 aa23.64■■□□□ 1.37
PPFIA1-201ENST00000253925 PRKAR2BP31323 418 aa23.64■■□□□ 1.37
PPFIA1-201ENST00000253925 FOXD4L5Q5VV16 416 aaPredicted RBP23.63■■□□□ 1.37
PPFIA1-201ENST00000253925 FOXD4L4Q8WXT5 416 aaPredicted RBP23.63■■□□□ 1.37
PPFIA1-201ENST00000253925 CDC45O75419 566 aa23.63■■□□□ 1.37
PPFIA1-201ENST00000253925 TSR2Q969E8 191 aaKnown RBP23.63■■□□□ 1.37
PPFIA1-201ENST00000253925 ZNF608Q9ULD9 1512 aaPredicted RBP23.63■■□□□ 1.37
PPFIA1-201ENST00000253925 NUCB2P80303 420 aa23.63■■□□□ 1.37
PPFIA1-201ENST00000253925 RALGAPBQ86X10 1494 aa23.63■■□□□ 1.37
PPFIA1-201ENST00000253925 MVPQ14764 893 aaKnown RBP23.62■■□□□ 1.37
PPFIA1-201ENST00000253925 CYB5RLQ6IPT4 315 aa23.62■■□□□ 1.37
PPFIA1-201ENST00000253925 SLC52A1Q9NWF4 448 aa23.62■■□□□ 1.37
PPFIA1-201ENST00000253925 PRAM1Q96QH2 718 aa23.62■■□□□ 1.37
PPFIA1-201ENST00000253925 TRHP20396 242 aaPredicted RBP23.61■■□□□ 1.37
PPFIA1-201ENST00000253925 ATP6V1DQ9Y5K8 247 aa23.61■■□□□ 1.37
PPFIA1-201ENST00000253925 ATF7IPQ6VMQ6 1270 aa23.6■■□□□ 1.37
PPFIA1-201ENST00000253925 GCC1Q96CN9 775 aa23.59■■□□□ 1.37
PPFIA1-201ENST00000253925 NOB1Q9ULX3 412 aaKnown RBP23.59■■□□□ 1.37
PPFIA1-201ENST00000253925 NSD3Q9BZ95 1437 aa23.59■■□□□ 1.37
PPFIA1-201ENST00000253925 C20orf194Q5TEA3 1177 aa23.59■■□□□ 1.37
PPFIA1-201ENST00000253925 RAPGEF6Q8TEU7 1601 aa23.58■■□□□ 1.37
PPFIA1-201ENST00000253925 TEFQ10587 303 aa23.58■■□□□ 1.37
PPFIA1-201ENST00000253925 FKBP5Q13451 457 aaPredicted RBP23.58■■□□□ 1.37
PPFIA1-201ENST00000253925 NUP153P49790 1475 aaKnown RBP23.58■■□□□ 1.37
PPFIA1-201ENST00000253925 TSPYL4Q9UJ04 414 aa23.57■■□□□ 1.36
PPFIA1-201ENST00000253925 NKTRP30414 1462 aaKnown RBP23.56■■□□□ 1.36
PPFIA1-201ENST00000253925 DUSP27Q5VZP5 1158 aa23.56■■□□□ 1.36
PPFIA1-201ENST00000253925 BRPF3Q9ULD4 1205 aa23.56■■□□□ 1.36
PPFIA1-201ENST00000253925 MRE11P49959 708 aa23.56■■□□□ 1.36
PPFIA1-201ENST00000253925 TWISTNBQ3B726 338 aaPredicted RBP23.55■■□□□ 1.36
PPFIA1-201ENST00000253925 ATAD2Q6PL18 1390 aa23.55■■□□□ 1.36
PPFIA1-201ENST00000253925 DISP3Q9P2K9 1392 aa23.55■■□□□ 1.36
PPFIA1-201ENST00000253925 RUFY2Q8WXA3 655 aa23.55■■□□□ 1.36
PPFIA1-201ENST00000253925 SCAF11Q99590 1463 aaKnown RBP23.54■■□□□ 1.36
PPFIA1-201ENST00000253925 GNL2Q13823 731 aaKnown RBP23.54■■□□□ 1.36
PPFIA1-201ENST00000253925 ANO2Q9NQ90 1003 aa23.54■■□□□ 1.36
PPFIA1-201ENST00000253925 DIAPH3Q9NSV4 1193 aa23.54■■□□□ 1.36
PPFIA1-201ENST00000253925 TRAK2O60296 914 aa23.54■■□□□ 1.36
PPFIA1-201ENST00000253925 HSP90B1P14625 803 aaKnown RBP23.54■■□□□ 1.36
PPFIA1-201ENST00000253925 FAM69CQ0P6D2 419 aa23.53■■□□□ 1.36
PPFIA1-201ENST00000253925 ZNF428Q96B54 188 aa23.53■■□□□ 1.36
PPFIA1-201ENST00000253925 CHMP3Q9Y3E7 222 aa23.53■■□□□ 1.36
PPFIA1-201ENST00000253925 C1orf141Q5JVX7 400 aa23.52■■□□□ 1.36
PPFIA1-201ENST00000253925 GORABQ5T7V8 394 aa23.52■■□□□ 1.36
PPFIA1-201ENST00000253925 CDK19Q9BWU1 502 aa23.52■■□□□ 1.36
PPFIA1-201ENST00000253925 KIF3AQ9Y496 699 aa23.52■■□□□ 1.36
PPFIA1-201ENST00000253925 ITSN2Q9NZM3 1697 aa23.52■■□□□ 1.36
PPFIA1-201ENST00000253925 CABP1Q9NZU7 370 aa23.52■■□□□ 1.36
PPFIA1-201ENST00000253925 EIF2S2P20042 333 aaKnown RBP23.51■■□□□ 1.35
PPFIA1-201ENST00000253925 LRPPRCP42704 1394 aaKnown RBP23.5■■□□□ 1.35
PPFIA1-201ENST00000253925 RARSP54136 660 aaKnown RBP23.5■■□□□ 1.35
PPFIA1-201ENST00000253925 NECTIN2Q92692 538 aa23.49■■□□□ 1.35
PPFIA1-201ENST00000253925 C9orf78Q9NZ63 289 aaPredicted RBP23.49■■□□□ 1.35
PPFIA1-201ENST00000253925 TMPOP42166 694 aaKnown RBP23.48■■□□□ 1.35
PPFIA1-201ENST00000253925 WDR62O43379 1518 aa23.48■■□□□ 1.35
PPFIA1-201ENST00000253925 FCHSD2O94868 740 aa23.48■■□□□ 1.35
PPFIA1-201ENST00000253925 TNNT3P45378 269 aaPredicted RBP23.48■■□□□ 1.35
PPFIA1-201ENST00000253925 ZKSCAN1P17029 563 aaPredicted RBP23.48■■□□□ 1.35
PPFIA1-201ENST00000253925 FOXD4L6Q3SYB3 417 aaPredicted RBP23.47■■□□□ 1.35
PPFIA1-201ENST00000253925 HSP90AB4PQ58FF6 505 aa23.47■■□□□ 1.35
PPFIA1-201ENST00000253925 FOXD4L3Q6VB84 417 aaPredicted RBP23.47■■□□□ 1.35
PPFIA1-201ENST00000253925 PARD3Q8TEW0 1356 aa23.47■■□□□ 1.35
PPFIA1-201ENST00000253925 MCTP1Q6DN14 999 aa23.46■■□□□ 1.35
PPFIA1-201ENST00000253925 ZNF330Q9Y3S2 320 aaPredicted RBP23.46■■□□□ 1.35
PPFIA1-201ENST00000253925 RABEP1Q15276 862 aa23.46■■□□□ 1.35
PPFIA1-201ENST00000253925 ATP10BO94823 1461 aa23.46■■□□□ 1.35
PPFIA1-201ENST00000253925 SKAP1Q86WV1 359 aa23.46■■□□□ 1.35
PPFIA1-201ENST00000253925 C1orf115Q9H7X2 142 aa23.46■■□□□ 1.35
PPFIA1-201ENST00000253925 ADGRF5Q8IZF2 1346 aa23.45■■□□□ 1.34
PPFIA1-201ENST00000253925 GNAI3P08754 354 aa23.45■■□□□ 1.34
PPFIA1-201ENST00000253925 PRAG1Q86YV5 1406 aa23.45■■□□□ 1.34
PPFIA1-201ENST00000253925 NEXNQ0ZGT2 675 aa23.45■■□□□ 1.34
PPFIA1-201ENST00000253925 CHD1LQ86WJ1 897 aa23.44■■□□□ 1.34
PPFIA1-201ENST00000253925 FAM135AQ9P2D6 1515 aa23.44■■□□□ 1.34
PPFIA1-201ENST00000253925 NUP160Q12769 1436 aa23.44■■□□□ 1.34
PPFIA1-201ENST00000253925 TAF7LQ5H9L4 462 aa23.44■■□□□ 1.34
PPFIA1-201ENST00000253925 IFIT2P09913 472 aaKnown RBP23.44■■□□□ 1.34
PPFIA1-201ENST00000253925 ZNF692Q9BU19 519 aaPredicted RBP23.43■■□□□ 1.34
PPFIA1-201ENST00000253925 TPM4P67936 248 aa23.43■■□□□ 1.34
PPFIA1-201ENST00000253925 GAS2L2Q8NHY3 880 aa23.43■■□□□ 1.34
PPFIA1-201ENST00000253925 CHMP4CQ96CF2 233 aa23.42■■□□□ 1.34
PPFIA1-201ENST00000253925 FAM13BQ9NYF5 915 aa23.41■■□□□ 1.34
PPFIA1-201ENST00000253925 ABCC11Q96J66 1382 aa23.41■■□□□ 1.34
PPFIA1-201ENST00000253925 UBTFL1P0CB47 393 aaPredicted RBP23.41■■□□□ 1.34
PPFIA1-201ENST00000253925 DHX29Q7Z478 1369 aaKnown RBP23.41■■□□□ 1.34
PPFIA1-201ENST00000253925 DDX58O95786 925 aaKnown RBP23.41■■□□□ 1.34
PPFIA1-201ENST00000253925 RAPGEF3O95398 923 aa23.4■■□□□ 1.34
PPFIA1-201ENST00000253925 NPHP1O15259 732 aa23.4■■□□□ 1.34
PPFIA1-201ENST00000253925 ARHGEF12Q9NZN5 1544 aa23.4■■□□□ 1.34
PPFIA1-201ENST00000253925 KIAA0556O60303 1618 aa23.4■■□□□ 1.34
PPFIA1-201ENST00000253925 ISY1Q9ULR0 285 aaKnown RBP23.4■■□□□ 1.34
PPFIA1-201ENST00000253925 RTEL1-TNFRSF6BF6WH68 1400 aa23.4■■□□□ 1.34
PPFIA1-201ENST00000253925 ADAMTS12P58397 1594 aa23.4■■□□□ 1.34
PPFIA1-201ENST00000253925 GPRASP1Q5JY77 1395 aa23.4■■□□□ 1.34
PPFIA1-201ENST00000253925 CCDC30Q5VVM6 783 aa23.39■■□□□ 1.34
PPFIA1-201ENST00000253925 H3BQV1 296 aa23.39■■□□□ 1.34
PPFIA1-201ENST00000253925 IFFO2Q5TF58 517 aa23.39■■□□□ 1.34
PPFIA1-201ENST00000253925 TMEM57Q8N5G2 664 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms