RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 SLKQ9H2G2 1235 aaPredicted RBP21.24■□□□□ 0.99
ACTN4-201ENST00000252699 PPP6R1Q9UPN7 881 aa21.24■□□□□ 0.99
ACTN4-201ENST00000252699 NSD3Q9BZ95 1437 aa21.24■□□□□ 0.99
ACTN4-201ENST00000252699 PANK1Q8TE04 598 aa21.24■□□□□ 0.99
ACTN4-201ENST00000252699 TRIM44Q96DX7 344 aaPredicted RBP21.24■□□□□ 0.99
ACTN4-201ENST00000252699 TCOF1Q13428 1488 aaKnown RBP21.23■□□□□ 0.99
ACTN4-201ENST00000252699 NEXNQ0ZGT2 675 aa21.23■□□□□ 0.99
ACTN4-201ENST00000252699 ITSN2Q9NZM3 1697 aa21.23■□□□□ 0.99
ACTN4-201ENST00000252699 PDE4AP27815 886 aa21.23■□□□□ 0.99
ACTN4-201ENST00000252699 NOS1P29475 1434 aa21.23■□□□□ 0.99
ACTN4-201ENST00000252699 SULT6B1Q6IMI4 303 aa21.22■□□□□ 0.99
ACTN4-201ENST00000252699 C9orf78Q9NZ63 289 aaPredicted RBP21.22■□□□□ 0.99
ACTN4-201ENST00000252699 GAS2L2Q8NHY3 880 aa21.21■□□□□ 0.99
ACTN4-201ENST00000252699 FAM135AQ9P2D6 1515 aa21.21■□□□□ 0.99
ACTN4-201ENST00000252699 GTF2E1P29083 439 aaPredicted RBP21.2■□□□□ 0.99
ACTN4-201ENST00000252699 FAM161AQ3B820 660 aa21.2■□□□□ 0.99
ACTN4-201ENST00000252699 MAPKBP1O60336 1514 aa21.2■□□□□ 0.98
ACTN4-201ENST00000252699 EXOSC9Q06265 439 aaKnown RBP21.2■□□□□ 0.98
ACTN4-201ENST00000252699 IPO9Q96P70 1041 aaKnown RBP21.19■□□□□ 0.98
ACTN4-201ENST00000252699 C14orf93Q9H972 538 aaKnown RBP21.19■□□□□ 0.98
ACTN4-201ENST00000252699 DUOX2Q9NRD8 1548 aa21.19■□□□□ 0.98
ACTN4-201ENST00000252699 CFAP43Q8NDM7 1665 aa21.19■□□□□ 0.98
ACTN4-201ENST00000252699 SYTL4Q96C24 671 aaPredicted RBP21.19■□□□□ 0.98
ACTN4-201ENST00000252699 A2MP01023 1474 aa21.18■□□□□ 0.98
ACTN4-201ENST00000252699 RRS1Q15050 365 aaKnown RBP21.18■□□□□ 0.98
ACTN4-201ENST00000252699 PBRM1Q86U86 1689 aa21.18■□□□□ 0.98
ACTN4-201ENST00000252699 DDX58O95786 925 aaKnown RBP21.17■□□□□ 0.98
ACTN4-201ENST00000252699 TSR2Q969E8 191 aaKnown RBP21.17■□□□□ 0.98
ACTN4-201ENST00000252699 ZNF518AQ6AHZ1 1483 aa21.17■□□□□ 0.98
ACTN4-201ENST00000252699 GOLGA6L4A6NEF3 574 aa21.16■□□□□ 0.98
ACTN4-201ENST00000252699 SCAF11Q99590 1463 aaKnown RBP21.16■□□□□ 0.98
ACTN4-201ENST00000252699 ABCC2Q92887 1545 aa21.14■□□□□ 0.98
ACTN4-201ENST00000252699 RILPL2Q969X0 211 aa21.14■□□□□ 0.97
ACTN4-201ENST00000252699 PLEKHO1Q53GL0 409 aaPredicted RBP21.14■□□□□ 0.97
ACTN4-201ENST00000252699 PTMAP06454 111 aaKnown RBP21.13■□□□□ 0.97
ACTN4-201ENST00000252699 AMOTL2Q9Y2J4 779 aa21.13■□□□□ 0.97
ACTN4-201ENST00000252699 USP35Q9P2H5 1018 aa21.12■□□□□ 0.97
ACTN4-201ENST00000252699 TWISTNBQ3B726 338 aaPredicted RBP21.12■□□□□ 0.97
ACTN4-201ENST00000252699 AAMPQ13685 434 aa21.11■□□□□ 0.97
ACTN4-201ENST00000252699 WDR63Q8IWG1 891 aa21.11■□□□□ 0.97
ACTN4-201ENST00000252699 XPCQ01831 940 aaPredicted RBP21.11■□□□□ 0.97
ACTN4-201ENST00000252699 WASLO00401 505 aaPredicted RBP21.1■□□□□ 0.97
ACTN4-201ENST00000252699 BCAR3O75815 825 aa21.1■□□□□ 0.97
ACTN4-201ENST00000252699 TARBP1Q13395 1621 aaKnown RBP21.1■□□□□ 0.97
ACTN4-201ENST00000252699 PLCB2Q00722 1185 aa21.1■□□□□ 0.97
ACTN4-201ENST00000252699 FCHSD2O94868 740 aa21.09■□□□□ 0.97
ACTN4-201ENST00000252699 ABCC10Q5T3U5 1492 aa21.09■□□□□ 0.97
ACTN4-201ENST00000252699 TEX14Q8IWB6 1497 aa21.09■□□□□ 0.97
ACTN4-201ENST00000252699 AIMP1Q12904 312 aaKnown RBP21.09■□□□□ 0.97
ACTN4-201ENST00000252699 LNPKQ9C0E8 428 aa21.09■□□□□ 0.97
ACTN4-201ENST00000252699 DISP3Q9P2K9 1392 aa21.09■□□□□ 0.97
ACTN4-201ENST00000252699 GBP4Q96PP9 640 aa21.08■□□□□ 0.97
ACTN4-201ENST00000252699 SMG6Q86US8 1419 aaKnown RBP21.07■□□□□ 0.96
ACTN4-201ENST00000252699 NME9Q86XW9 330 aa21.07■□□□□ 0.96
ACTN4-201ENST00000252699 TMX4Q9H1E5 349 aaPredicted RBP21.07■□□□□ 0.96
ACTN4-201ENST00000252699 NOL8Q76FK4 1167 aaKnown RBP21.07■□□□□ 0.96
ACTN4-201ENST00000252699 AEBP2Q6ZN18 517 aaPredicted RBP21.07■□□□□ 0.96
ACTN4-201ENST00000252699 SAMD9Q5K651 1589 aa21.07■□□□□ 0.96
ACTN4-201ENST00000252699 SHANK2Q9UPX8 1470 aa21.07■□□□□ 0.96
ACTN4-201ENST00000252699 PDE3AQ14432 1141 aa21.06■□□□□ 0.96
ACTN4-201ENST00000252699 CCDC30Q5VVM6 783 aa21.06■□□□□ 0.96
ACTN4-201ENST00000252699 RIC3Q7Z5B4 369 aa21.06■□□□□ 0.96
ACTN4-201ENST00000252699 STRN4Q9NRL3 753 aa21.06■□□□□ 0.96
ACTN4-201ENST00000252699 CEP170Q5SW79 1584 aa21.05■□□□□ 0.96
ACTN4-201ENST00000252699 TNRQ92752 1358 aa21.05■□□□□ 0.96
ACTN4-201ENST00000252699 TATP17735 454 aaPredicted RBP21.05■□□□□ 0.96
ACTN4-201ENST00000252699 ZNF530Q6P9A1 599 aaPredicted RBP21.05■□□□□ 0.96
ACTN4-201ENST00000252699 FRAT2O75474 233 aaPredicted RBP21.05■□□□□ 0.96
ACTN4-201ENST00000252699 WWC1Q8IX03 1113 aa21.04■□□□□ 0.96
ACTN4-201ENST00000252699 RBM33Q96EV2 1170 aaKnown RBP21.04■□□□□ 0.96
ACTN4-201ENST00000252699 FOXD4L1Q9NU39 408 aa21.04■□□□□ 0.96
ACTN4-201ENST00000252699 TMPOP42166 694 aaKnown RBP21.04■□□□□ 0.96
ACTN4-201ENST00000252699 ST18O60284 1047 aa21.04■□□□□ 0.96
ACTN4-201ENST00000252699 ISY1Q9ULR0 285 aaKnown RBP21.03■□□□□ 0.96
ACTN4-201ENST00000252699 UBTFL1P0CB47 393 aaPredicted RBP21.02■□□□□ 0.96
ACTN4-201ENST00000252699 MEX3CQ5U5Q3 659 aaKnown RBP21.02■□□□□ 0.96
ACTN4-201ENST00000252699 NOB1Q9ULX3 412 aaKnown RBP21.02■□□□□ 0.96
ACTN4-201ENST00000252699 IFIT2P09913 472 aaKnown RBP21.02■□□□□ 0.96
ACTN4-201ENST00000252699 G3BP1Q13283 466 aaKnown RBP eCLIP21.02■□□□□ 0.963e-10■■□□□ 13.6
ACTN4-201ENST00000252699 PRAG1Q86YV5 1406 aa21.02■□□□□ 0.95
ACTN4-201ENST00000252699 ZC3H6P61129 1189 aaKnown RBP21.01■□□□□ 0.95
ACTN4-201ENST00000252699 GNL2Q13823 731 aaKnown RBP21.01■□□□□ 0.95
ACTN4-201ENST00000252699 PRDM11Q9NQV5 511 aa21.01■□□□□ 0.95
ACTN4-201ENST00000252699 RALGAPBQ86X10 1494 aa21.01■□□□□ 0.95
ACTN4-201ENST00000252699 NFE2L2Q16236 605 aa21.01■□□□□ 0.95
ACTN4-201ENST00000252699 CT47B1P0C2W7 299 aaPredicted RBP21.01■□□□□ 0.95
ACTN4-201ENST00000252699 DIAPH3Q9NSV4 1193 aa21■□□□□ 0.95
ACTN4-201ENST00000252699 SLC4A2P04920 1241 aa21■□□□□ 0.95
ACTN4-201ENST00000252699 SLC4A3P48751 1232 aa21■□□□□ 0.95
ACTN4-201ENST00000252699 SLFN5Q08AF3 891 aa21■□□□□ 0.95
ACTN4-201ENST00000252699 HDGFL1Q5TGJ6 251 aa21■□□□□ 0.95
ACTN4-201ENST00000252699 PHF8Q9UPP1 1060 aa21■□□□□ 0.95
ACTN4-201ENST00000252699 EMILIN1Q9Y6C2 1016 aa20.99■□□□□ 0.95
ACTN4-201ENST00000252699 TOM1L2Q6ZVM7 507 aa20.99■□□□□ 0.95
ACTN4-201ENST00000252699 HSP90B1P14625 803 aaKnown RBP20.99■□□□□ 0.95
ACTN4-201ENST00000252699 FOXO3O43524 673 aa20.98■□□□□ 0.95
ACTN4-201ENST00000252699 GNAI3P08754 354 aa20.98■□□□□ 0.95
ACTN4-201ENST00000252699 HSP90AB4PQ58FF6 505 aa20.98■□□□□ 0.95
ACTN4-201ENST00000252699 DNMT1P26358 1616 aaKnown RBP20.98■□□□□ 0.95
ACTN4-201ENST00000252699 KCNH5Q8NCM2 988 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms