RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 CENPJQ9HC77 1338 aaPredicted RBP32.26■■■□□ 2.75
APOE-201ENST00000252486 DCCP43146 1447 aa32.24■■■□□ 2.75
APOE-201ENST00000252486 NALCNQ8IZF0 1738 aa32.23■■■□□ 2.75
APOE-201ENST00000252486 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.21■■■□□ 2.75
APOE-201ENST00000252486 SAFB2Q14151 953 aaKnown RBP eCLIP32.21■■■□□ 2.75
APOE-201ENST00000252486 CADPS2Q86UW7 1296 aa32.2■■■□□ 2.75
APOE-201ENST00000252486 USP47Q96K76 1375 aa32.19■■■□□ 2.74
APOE-201ENST00000252486 ATF3P18847 181 aa32.18■■■□□ 2.74
APOE-201ENST00000252486 CDC42BPGQ6DT37 1551 aa32.18■■■□□ 2.74
APOE-201ENST00000252486 ADGRB2O60241 1585 aa32.17■■■□□ 2.74
APOE-201ENST00000252486 QRICH2Q9H0J4 1663 aa32.17■■■□□ 2.74
APOE-201ENST00000252486 TOM1O60784 492 aa32.15■■■□□ 2.74
APOE-201ENST00000252486 MINK1Q8N4C8 1332 aaPredicted RBP32.15■■■□□ 2.74
APOE-201ENST00000252486 SLC24A1O60721 1099 aa32.14■■■□□ 2.74
APOE-201ENST00000252486 SBNO2Q9Y2G9 1366 aa32.14■■■□□ 2.74
APOE-201ENST00000252486 EIF4G2P78344 907 aaKnown RBP eCLIP32.12■■■□□ 2.73
APOE-201ENST00000252486 ST20-MTHFSA0A0A6YYL1 179 aa32.1■■■□□ 2.73
APOE-201ENST00000252486 UBAP1LF5GYI3 381 aa32.09■■■□□ 2.73
APOE-201ENST00000252486 HIRIP3Q9BW71 556 aaPredicted RBP32.08■■■□□ 2.73
APOE-201ENST00000252486 WASLO00401 505 aaPredicted RBP32.07■■■□□ 2.72
APOE-201ENST00000252486 FMN2Q9NZ56 1722 aa32.05■■■□□ 2.72
APOE-201ENST00000252486 EVC2Q86UK5 1308 aa32.04■■■□□ 2.72
APOE-201ENST00000252486 SLAIN2Q9P270 581 aa32.04■■■□□ 2.72
APOE-201ENST00000252486 MST1RQ04912 1400 aa32.03■■■□□ 2.72
APOE-201ENST00000252486 ANKARQ7Z5J8 1434 aa32.01■■■□□ 2.72
APOE-201ENST00000252486 TESK2Q96S53 571 aa32.01■■■□□ 2.71
APOE-201ENST00000252486 HSPA5P11021 654 aaKnown RBP32■■■□□ 2.71
APOE-201ENST00000252486 CDK19Q9BWU1 502 aa32■■■□□ 2.71
APOE-201ENST00000252486 TULP4Q9NRJ4 1543 aa32■■■□□ 2.71
APOE-201ENST00000252486 C1orf167Q5SNV9 1468 aa31.99■■■□□ 2.71
APOE-201ENST00000252486 SRPK2P78362 688 aaKnown RBP31.95■■■□□ 2.71
APOE-201ENST00000252486 TMF1P82094 1093 aa31.95■■■□□ 2.71
APOE-201ENST00000252486 PUS7Q96PZ0 661 aaKnown RBP31.94■■■□□ 2.7
APOE-201ENST00000252486 NUTM2FA1L443 756 aa31.92■■■□□ 2.7
APOE-201ENST00000252486 PIP4K2BP78356 416 aa31.92■■■□□ 2.7
APOE-201ENST00000252486 FBXO41Q8TF61 875 aa31.92■■■□□ 2.7
APOE-201ENST00000252486 CDCA8Q53HL2 280 aa31.91■■■□□ 2.7
APOE-201ENST00000252486 NUDT16Q96DE0 195 aaKnown RBP31.9■■■□□ 2.7
APOE-201ENST00000252486 SCAF1Q9H7N4 1312 aaKnown RBP31.9■■■□□ 2.7
APOE-201ENST00000252486 ATP7BP35670 1465 aa31.9■■■□□ 2.7
APOE-201ENST00000252486 USP32Q8NFA0 1604 aa31.89■■■□□ 2.7
APOE-201ENST00000252486 ITSN1Q15811 1721 aa31.89■■■□□ 2.7
APOE-201ENST00000252486 ILDR1Q86SU0 546 aaPredicted RBP31.89■■■□□ 2.7
APOE-201ENST00000252486 ATAD2Q6PL18 1390 aa31.89■■■□□ 2.7
APOE-201ENST00000252486 ESCO1Q5FWF5 840 aa31.88■■■□□ 2.69
APOE-201ENST00000252486 BRINP3Q76B58 766 aa31.88■■■□□ 2.69
APOE-201ENST00000252486 CABP2Q9NPB3 220 aa31.88■■■□□ 2.69
APOE-201ENST00000252486 CCDC61Q9Y6R9 512 aa31.88■■■□□ 2.69
APOE-201ENST00000252486 PRR36Q9H6K5 1346 aa31.88■■■□□ 2.69
APOE-201ENST00000252486 ROBO1Q9Y6N7 1651 aa31.88■■■□□ 2.69
APOE-201ENST00000252486 KIF1AQ12756 1690 aa31.86■■■□□ 2.69
APOE-201ENST00000252486 RGPD8O14715 1765 aaPredicted RBP31.86■■■□□ 2.69
APOE-201ENST00000252486 ORAI2Q96SN7 254 aa31.85■■■□□ 2.69
APOE-201ENST00000252486 DISP3Q9P2K9 1392 aa31.83■■■□□ 2.69
APOE-201ENST00000252486 PHF8Q9UPP1 1060 aa31.83■■■□□ 2.69
APOE-201ENST00000252486 TOPAZ1Q8N9V7 1692 aa31.83■■■□□ 2.69
APOE-201ENST00000252486 PPIP5K1Q6PFW1 1433 aa31.78■■■□□ 2.68
APOE-201ENST00000252486 PLEKHG3A1L390 1219 aa31.78■■■□□ 2.68
APOE-201ENST00000252486 NINLQ9Y2I6 1382 aa31.77■■■□□ 2.68
APOE-201ENST00000252486 NPHP3Q7Z494 1330 aa31.76■■■□□ 2.68
APOE-201ENST00000252486 AHDC1Q5TGY3 1603 aaPredicted RBP31.76■■■□□ 2.67
APOE-201ENST00000252486 NHSL1Q5SYE7 1610 aa31.75■■■□□ 2.67
APOE-201ENST00000252486 PMFBP1Q8TBY8 1022 aa31.74■■■□□ 2.67
APOE-201ENST00000252486 NGDNQ8NEJ9 315 aaKnown RBP31.73■■■□□ 2.67
APOE-201ENST00000252486 CABP1Q9NZU7 370 aa31.73■■■□□ 2.67
APOE-201ENST00000252486 POLR3AO14802 1390 aaPredicted RBP31.71■■■□□ 2.67
APOE-201ENST00000252486 FOXO3O43524 673 aa31.71■■■□□ 2.67
APOE-201ENST00000252486 TMC1Q8TDI8 760 aa31.69■■■□□ 2.66
APOE-201ENST00000252486 ACEP12821 1306 aa31.69■■■□□ 2.66
APOE-201ENST00000252486 PHLPP1O60346 1717 aa31.69■■■□□ 2.66
APOE-201ENST00000252486 PSME1Q06323 249 aa31.68■■■□□ 2.66
APOE-201ENST00000252486 ZNF692Q9BU19 519 aaPredicted RBP31.66■■■□□ 2.66
APOE-201ENST00000252486 SOS2Q07890 1332 aaPredicted RBP31.66■■■□□ 2.66
APOE-201ENST00000252486 C11orf95C9JLR9 678 aaPredicted RBP31.65■■■□□ 2.66
APOE-201ENST00000252486 SLC12A5Q9H2X9 1139 aa31.65■■■□□ 2.66
APOE-201ENST00000252486 TERF2IPQ9NYB0 399 aa31.65■■■□□ 2.66
APOE-201ENST00000252486 KRT28Q7Z3Y7 464 aa31.64■■■□□ 2.66
APOE-201ENST00000252486 POLR3GLQ9BT43 218 aa31.64■■■□□ 2.66
APOE-201ENST00000252486 BRD4O60885 1362 aaPredicted RBP31.64■■■□□ 2.66
APOE-201ENST00000252486 PXDNQ92626 1479 aa31.64■■■□□ 2.66
APOE-201ENST00000252486 HDGFL2Q7Z4V5 671 aaPredicted RBP31.63■■■□□ 2.65
APOE-201ENST00000252486 DDX17Q92841 729 aaKnown RBP31.63■■■□□ 2.65
APOE-201ENST00000252486 KIF7Q2M1P5 1343 aa31.63■■■□□ 2.65
APOE-201ENST00000252486 HSPA1LP34931 641 aa31.62■■■□□ 2.65
APOE-201ENST00000252486 COL16A1Q07092 1604 aaPredicted RBP31.61■■■□□ 2.65
APOE-201ENST00000252486 CPSF1Q10570 1443 aaKnown RBP31.61■■■□□ 2.65
APOE-201ENST00000252486 SBNO1A3KN83 1393 aa31.6■■■□□ 2.65
APOE-201ENST00000252486 CCDC7Q96M83 1385 aa31.6■■■□□ 2.65
APOE-201ENST00000252486 LRRC59Q96AG4 307 aaKnown RBP31.6■■■□□ 2.65
APOE-201ENST00000252486 AKAP12Q02952 1782 aa31.6■■■□□ 2.65
APOE-201ENST00000252486 MYOM1P52179 1685 aa31.59■■■□□ 2.65
APOE-201ENST00000252486 ANKRD36BQ8N2N9 1353 aa31.58■■■□□ 2.65
APOE-201ENST00000252486 USP6P35125 1406 aa31.58■■■□□ 2.65
APOE-201ENST00000252486 XPCQ01831 940 aaPredicted RBP31.57■■■□□ 2.64
APOE-201ENST00000252486 CD163L1Q9NR16 1453 aa31.57■■■□□ 2.64
APOE-201ENST00000252486 KTN1Q86UP2 1357 aaKnown RBP31.56■■■□□ 2.64
APOE-201ENST00000252486 WASHC2AQ641Q2 1341 aa31.55■■■□□ 2.64
APOE-201ENST00000252486 MON2Q7Z3U7 1717 aa31.55■■■□□ 2.64
APOE-201ENST00000252486 TRPM3Q9HCF6 1732 aaPredicted RBP31.54■■■□□ 2.64
APOE-201ENST00000252486 A0A1W2PP64 1363 aa31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms