RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 GRPEL1Q9HAV7 217 aa16.88■□□□□ 0.29
NFKB1-201ENST00000226574 REC8O95072 547 aa16.87■□□□□ 0.29
NFKB1-201ENST00000226574 C8orf34Q49A92 452 aa16.87■□□□□ 0.29
NFKB1-201ENST00000226574 PRAM1Q96QH2 718 aa16.87■□□□□ 0.29
NFKB1-201ENST00000226574 CABP1Q9NZU7 370 aa16.87■□□□□ 0.29
NFKB1-201ENST00000226574 ABCA10Q8WWZ4 1543 aa16.86■□□□□ 0.29
NFKB1-201ENST00000226574 PANK2Q9BZ23 570 aa16.86■□□□□ 0.29
NFKB1-201ENST00000226574 CDC45O75419 566 aa16.86■□□□□ 0.29
NFKB1-201ENST00000226574 GNAI1P63096 354 aa16.86■□□□□ 0.29
NFKB1-201ENST00000226574 TWISTNBQ3B726 338 aaPredicted RBP16.86■□□□□ 0.29
NFKB1-201ENST00000226574 ARHGAP5Q13017 1502 aa16.85■□□□□ 0.29
NFKB1-201ENST00000226574 DCTN1Q14203 1278 aa16.85■□□□□ 0.29
NFKB1-201ENST00000226574 DHX29Q7Z478 1369 aaKnown RBP16.85■□□□□ 0.29
NFKB1-201ENST00000226574 INTS3Q68E01 1043 aaKnown RBP16.84■□□□□ 0.29
NFKB1-201ENST00000226574 VPS37CA5D8V6 355 aaPredicted RBP16.84■□□□□ 0.29
NFKB1-201ENST00000226574 ESPNB1AK53 854 aa16.84■□□□□ 0.29
NFKB1-201ENST00000226574 CHD1LQ86WJ1 897 aa16.84■□□□□ 0.29
NFKB1-201ENST00000226574 HMGXB3Q12766 1538 aa16.84■□□□□ 0.29
NFKB1-201ENST00000226574 HSP90B1P14625 803 aaKnown RBP16.84■□□□□ 0.29
NFKB1-201ENST00000226574 ADGRF5Q8IZF2 1346 aa16.84■□□□□ 0.29
NFKB1-201ENST00000226574 CCDC27Q2M243 656 aa16.83■□□□□ 0.29
NFKB1-201ENST00000226574 TMPOP42166 694 aaKnown RBP16.83■□□□□ 0.28
NFKB1-201ENST00000226574 SCAPERQ9BY12 1400 aa16.83■□□□□ 0.28
NFKB1-201ENST00000226574 NUCB2P80303 420 aa16.83■□□□□ 0.28
NFKB1-201ENST00000226574 WDR63Q8IWG1 891 aa16.83■□□□□ 0.28
NFKB1-201ENST00000226574 TSPYL4Q9UJ04 414 aa16.82■□□□□ 0.28
NFKB1-201ENST00000226574 RLBP1P12271 317 aa16.82■□□□□ 0.28
NFKB1-201ENST00000226574 HDGFP51858 240 aaKnown RBP16.82■□□□□ 0.28
NFKB1-201ENST00000226574 FBXW7Q969H0 707 aa16.82■□□□□ 0.28
NFKB1-201ENST00000226574 CAMSAP2Q08AD1 1489 aa16.81■□□□□ 0.28
NFKB1-201ENST00000226574 PER1O15534 1290 aaPredicted RBP16.81■□□□□ 0.28
NFKB1-201ENST00000226574 FOSBP53539 338 aa16.81■□□□□ 0.28
NFKB1-201ENST00000226574 RRS1Q15050 365 aaKnown RBP16.81■□□□□ 0.28
NFKB1-201ENST00000226574 PLEKHH1Q9ULM0 1364 aa16.81■□□□□ 0.28
NFKB1-201ENST00000226574 TRIM27P14373 513 aa16.81■□□□□ 0.28
NFKB1-201ENST00000226574 TULP1O00294 542 aaPredicted RBP16.81■□□□□ 0.28
NFKB1-201ENST00000226574 NSD3Q9BZ95 1437 aa16.8■□□□□ 0.28
NFKB1-201ENST00000226574 ZNF592Q92610 1267 aa16.8■□□□□ 0.28
NFKB1-201ENST00000226574 MIS18AQ9NYP9 233 aa16.8■□□□□ 0.28
NFKB1-201ENST00000226574 DMRT2Q9Y5R5 561 aa16.8■□□□□ 0.28
NFKB1-201ENST00000226574 LRPPRCP42704 1394 aaKnown RBP16.8■□□□□ 0.28
NFKB1-201ENST00000226574 THOC2Q8NI27 1593 aaKnown RBP16.79■□□□□ 0.28
NFKB1-201ENST00000226574 TESK2Q96S53 571 aa16.79■□□□□ 0.28
NFKB1-201ENST00000226574 HECW1Q76N89 1606 aa16.79■□□□□ 0.28
NFKB1-201ENST00000226574 K7ELQ4 463 aaPredicted RBP16.79■□□□□ 0.28
NFKB1-201ENST00000226574 SMARCA5O60264 1052 aaPredicted RBP16.79■□□□□ 0.28
NFKB1-201ENST00000226574 MAP4K4O95819 1239 aaPredicted RBP16.78■□□□□ 0.28
NFKB1-201ENST00000226574 SLC4A2P04920 1241 aa16.78■□□□□ 0.28
NFKB1-201ENST00000226574 SULT6B1Q6IMI4 303 aa16.78■□□□□ 0.28
NFKB1-201ENST00000226574 DIAPH3Q9NSV4 1193 aa16.78■□□□□ 0.28
NFKB1-201ENST00000226574 AAMPQ13685 434 aa16.78■□□□□ 0.28
NFKB1-201ENST00000226574 SNAPC4Q5SXM2 1469 aa16.78■□□□□ 0.28
NFKB1-201ENST00000226574 CYB5RLQ6IPT4 315 aa16.77■□□□□ 0.28
NFKB1-201ENST00000226574 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.28
NFKB1-201ENST00000226574 SSFA2P28290 1259 aa16.77■□□□□ 0.28
NFKB1-201ENST00000226574 STAC3Q96MF2 364 aa16.77■□□□□ 0.27
NFKB1-201ENST00000226574 CC2D2AQ9P2K1 1620 aa16.76■□□□□ 0.27
NFKB1-201ENST00000226574 BIVM-ERCC5R4GMW8 1640 aa16.76■□□□□ 0.27
NFKB1-201ENST00000226574 PHF14O94880 888 aa16.76■□□□□ 0.27
NFKB1-201ENST00000226574 RAPGEF3O95398 923 aa16.76■□□□□ 0.27
NFKB1-201ENST00000226574 RBM42Q9BTD8 480 aaKnown RBP16.76■□□□□ 0.27
NFKB1-201ENST00000226574 NKTRP30414 1462 aaKnown RBP16.76■□□□□ 0.27
NFKB1-201ENST00000226574 GOLGA6L6A8MZA4 724 aa16.76■□□□□ 0.27
NFKB1-201ENST00000226574 TXNDC2Q86VQ3 553 aa16.76■□□□□ 0.27
NFKB1-201ENST00000226574 FIBPO43427 364 aa16.75■□□□□ 0.27
NFKB1-201ENST00000226574 NRDCO43847 1150 aa16.75■□□□□ 0.27
NFKB1-201ENST00000226574 CSB-PGBD3P0DP91 1061 aa16.75■□□□□ 0.27
NFKB1-201ENST00000226574 GNL2Q13823 731 aaKnown RBP16.75■□□□□ 0.27
NFKB1-201ENST00000226574 TNPO1Q92973 898 aaKnown RBP16.75■□□□□ 0.27
NFKB1-201ENST00000226574 UPF3BQ9BZI7 483 aaKnown RBP16.75■□□□□ 0.27
NFKB1-201ENST00000226574 C9orf78Q9NZ63 289 aaPredicted RBP16.75■□□□□ 0.27
NFKB1-201ENST00000226574 SYNJ2O15056 1496 aa16.75■□□□□ 0.27
NFKB1-201ENST00000226574 XRCC6P12956 609 aaKnown RBP eCLIP16.75■□□□□ 0.27
NFKB1-201ENST00000226574 CDK11BP21127 795 aaKnown RBP16.75■□□□□ 0.27
NFKB1-201ENST00000226574 TBC1D32Q96NH3 1257 aa16.75■□□□□ 0.27
NFKB1-201ENST00000226574 CDK19Q9BWU1 502 aa16.75■□□□□ 0.27
NFKB1-201ENST00000226574 SURF6O75683 361 aaKnown RBP16.74■□□□□ 0.27
NFKB1-201ENST00000226574 EXOC6BQ9Y2D4 811 aa16.74■□□□□ 0.27
NFKB1-201ENST00000226574 IL1RAPL2Q9NP60 686 aa16.74■□□□□ 0.27
NFKB1-201ENST00000226574 PEG3Q9GZU2 1588 aa16.73■□□□□ 0.27
NFKB1-201ENST00000226574 TEFQ10587 303 aa16.73■□□□□ 0.27
NFKB1-201ENST00000226574 SMC3Q9UQE7 1217 aa16.73■□□□□ 0.27
NFKB1-201ENST00000226574 PLEKHH2Q8IVE3 1493 aa16.73■□□□□ 0.27
NFKB1-201ENST00000226574 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.73■□□□□ 0.27
NFKB1-201ENST00000226574 GCC1Q96CN9 775 aa16.73■□□□□ 0.27
NFKB1-201ENST00000226574 LARP6Q9BRS8 491 aaKnown RBP16.73■□□□□ 0.27
NFKB1-201ENST00000226574 AIMP1Q12904 312 aaKnown RBP16.72■□□□□ 0.27
NFKB1-201ENST00000226574 DDX54Q8TDD1 881 aaKnown RBP16.72■□□□□ 0.27
NFKB1-201ENST00000226574 GORABQ5T7V8 394 aa16.72■□□□□ 0.27
NFKB1-201ENST00000226574 PARD3Q8TEW0 1356 aa16.72■□□□□ 0.27
NFKB1-201ENST00000226574 H3BQV1 296 aa16.71■□□□□ 0.27
NFKB1-201ENST00000226574 RABEP1Q15276 862 aa16.71■□□□□ 0.27
NFKB1-201ENST00000226574 IFFO2Q5TF58 517 aa16.71■□□□□ 0.27
NFKB1-201ENST00000226574 WAPLQ7Z5K2 1190 aa16.71■□□□□ 0.27
NFKB1-201ENST00000226574 GPATCH3Q96I76 525 aa16.71■□□□□ 0.27
NFKB1-201ENST00000226574 IQGAP2Q13576 1575 aa16.71■□□□□ 0.27
NFKB1-201ENST00000226574 KIAA0586Q9BVV6 1533 aa16.71■□□□□ 0.26
NFKB1-201ENST00000226574 TSHZ3Q63HK5 1081 aa16.7■□□□□ 0.26
NFKB1-201ENST00000226574 SPC24Q8NBT2 197 aa16.7■□□□□ 0.26
NFKB1-201ENST00000226574 SYCE3A1L190 88 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms