RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 C14orf93Q9H972 538 aaKnown RBP22.46■■□□□ 1.19
USB1-201ENST00000219281 E9PSI1 815 aa22.45■■□□□ 1.18
USB1-201ENST00000219281 ARHGAP31Q2M1Z3 1444 aa22.45■■□□□ 1.18
USB1-201ENST00000219281 RPGRIP1LQ68CZ1 1315 aa22.45■■□□□ 1.18
USB1-201ENST00000219281 RGS3P49796 1198 aa22.44■■□□□ 1.18
USB1-201ENST00000219281 DMRT2Q9Y5R5 561 aa22.44■■□□□ 1.18
USB1-201ENST00000219281 SLC4A3P48751 1232 aa22.43■■□□□ 1.18
USB1-201ENST00000219281 IDI1Q13907 227 aa22.43■■□□□ 1.18
USB1-201ENST00000219281 PPLO60437 1756 aa22.42■■□□□ 1.18
USB1-201ENST00000219281 PIK3C2BO00750 1634 aa22.4■■□□□ 1.18
USB1-201ENST00000219281 NUTM2DQ5VT03 806 aaPredicted RBP22.4■■□□□ 1.18
USB1-201ENST00000219281 TMEM132EQ6IEE7 984 aa22.4■■□□□ 1.18
USB1-201ENST00000219281 DAXXQ9UER7 740 aaPredicted RBP22.39■■□□□ 1.17
USB1-201ENST00000219281 TRAK1Q9UPV9 953 aa22.39■■□□□ 1.17
USB1-201ENST00000219281 SETBP1Q9Y6X0 1596 aa22.39■■□□□ 1.17
USB1-201ENST00000219281 TSPOAP1O95153 1857 aa22.38■■□□□ 1.17
USB1-201ENST00000219281 NGEFQ8N5V2 710 aa22.37■■□□□ 1.17
USB1-201ENST00000219281 ADGRB1O14514 1584 aa22.37■■□□□ 1.17
USB1-201ENST00000219281 SLC52A1Q9NWF4 448 aa22.36■■□□□ 1.17
USB1-201ENST00000219281 SBNO2Q9Y2G9 1366 aa22.36■■□□□ 1.17
USB1-201ENST00000219281 WWC1Q8IX03 1113 aa22.36■■□□□ 1.17
USB1-201ENST00000219281 ZC3H13Q5T200 1668 aaKnown RBP22.35■■□□□ 1.17
USB1-201ENST00000219281 CENPJQ9HC77 1338 aaPredicted RBP22.35■■□□□ 1.17
USB1-201ENST00000219281 POLR3AO14802 1390 aaPredicted RBP22.35■■□□□ 1.17
USB1-201ENST00000219281 IGHDP01880 384 aa22.35■■□□□ 1.17
USB1-201ENST00000219281 VGFO15240 615 aaPredicted RBP22.34■■□□□ 1.17
USB1-201ENST00000219281 FBXO31Q5XUX0 539 aaPredicted RBP22.34■■□□□ 1.17
USB1-201ENST00000219281 MYO3AQ8NEV4 1616 aa22.33■■□□□ 1.17
USB1-201ENST00000219281 TNNT2P45379 298 aaPredicted RBP22.33■■□□□ 1.17
USB1-201ENST00000219281 NEXMIFQ5QGS0 1516 aa22.33■■□□□ 1.17
USB1-201ENST00000219281 MORC1Q86VD1 984 aa22.33■■□□□ 1.16
USB1-201ENST00000219281 CANXP27824 592 aaKnown RBP22.32■■□□□ 1.16
USB1-201ENST00000219281 PDE3AQ14432 1141 aa22.32■■□□□ 1.16
USB1-201ENST00000219281 NFKBIBQ15653 356 aa22.32■■□□□ 1.16
USB1-201ENST00000219281 NEUROD2Q15784 382 aa22.32■■□□□ 1.16
USB1-201ENST00000219281 NSD3Q9BZ95 1437 aa22.31■■□□□ 1.16
USB1-201ENST00000219281 CGNL1Q0VF96 1302 aa22.31■■□□□ 1.16
USB1-201ENST00000219281 PANK1Q8TE04 598 aa22.31■■□□□ 1.16
USB1-201ENST00000219281 SLC12A5Q9H2X9 1139 aa22.31■■□□□ 1.16
USB1-201ENST00000219281 COG6Q9Y2V7 657 aa22.3■■□□□ 1.16
USB1-201ENST00000219281 RRP7AQ9Y3A4 280 aaKnown RBP22.29■■□□□ 1.16
USB1-201ENST00000219281 CLUAP1Q96AJ1 413 aa22.28■■□□□ 1.16
USB1-201ENST00000219281 PREX1Q8TCU6 1659 aa22.27■■□□□ 1.16
USB1-201ENST00000219281 FRAT1Q92837 279 aaPredicted RBP22.27■■□□□ 1.16
USB1-201ENST00000219281 RUNDC1Q96C34 613 aa22.27■■□□□ 1.16
USB1-201ENST00000219281 ZFYVE9O95405 1425 aa22.26■■□□□ 1.15
USB1-201ENST00000219281 NINLQ9Y2I6 1382 aa22.26■■□□□ 1.15
USB1-201ENST00000219281 IL27Q8NEV9 243 aa22.26■■□□□ 1.15
USB1-201ENST00000219281 TCP11L2Q8N4U5 519 aa22.25■■□□□ 1.15
USB1-201ENST00000219281 AGLP35573 1532 aa22.25■■□□□ 1.15
USB1-201ENST00000219281 REREQ9P2R6 1566 aa22.24■■□□□ 1.15
USB1-201ENST00000219281 SENP3Q9H4L4 574 aaPredicted RBP22.24■■□□□ 1.15
USB1-201ENST00000219281 TMEM131LA2VDJ0 1609 aa22.24■■□□□ 1.15
USB1-201ENST00000219281 PPP6R1Q9UPN7 881 aa22.24■■□□□ 1.15
USB1-201ENST00000219281 SHPRHQ149N8 1683 aa22.23■■□□□ 1.15
USB1-201ENST00000219281 RARSP54136 660 aaKnown RBP22.23■■□□□ 1.15
USB1-201ENST00000219281 GSE1Q14687 1217 aa22.23■■□□□ 1.15
USB1-201ENST00000219281 MYO5BQ9ULV0 1848 aa22.22■■□□□ 1.15
USB1-201ENST00000219281 MTHFSP49914 203 aa22.22■■□□□ 1.15
USB1-201ENST00000219281 QRICH2Q9H0J4 1663 aa22.21■■□□□ 1.15
USB1-201ENST00000219281 MAPK8IP3Q9UPT6 1336 aa22.2■■□□□ 1.14
USB1-201ENST00000219281 MLECQ14165 292 aa22.19■■□□□ 1.14
USB1-201ENST00000219281 IQSEC2Q5JU85 1478 aa22.19■■□□□ 1.14
USB1-201ENST00000219281 USP19O94966 1318 aa22.19■■□□□ 1.14
USB1-201ENST00000219281 KIF13AQ9H1H9 1805 aa22.19■■□□□ 1.14
USB1-201ENST00000219281 WDR63Q8IWG1 891 aa22.19■■□□□ 1.14
USB1-201ENST00000219281 PHF23Q9BUL5 403 aaPredicted RBP22.19■■□□□ 1.14
USB1-201ENST00000219281 TNNQ9UQP3 1299 aa22.18■■□□□ 1.14
USB1-201ENST00000219281 SEC24BO95487 1268 aa22.18■■□□□ 1.14
USB1-201ENST00000219281 CFAP53Q96M91 514 aa22.17■■□□□ 1.14
USB1-201ENST00000219281 BCL2L13Q9BXK5 485 aa22.17■■□□□ 1.14
USB1-201ENST00000219281 RLBP1P12271 317 aa22.17■■□□□ 1.14
USB1-201ENST00000219281 STK26Q9P289 416 aa22.17■■□□□ 1.14
USB1-201ENST00000219281 FRAT2O75474 233 aaPredicted RBP22.15■■□□□ 1.14
USB1-201ENST00000219281 PMFBP1Q8TBY8 1022 aa22.15■■□□□ 1.14
USB1-201ENST00000219281 PCDHB15Q9Y5E8 787 aa22.15■■□□□ 1.14
USB1-201ENST00000219281 ARHGEF28Q8N1W1 1705 aaKnown RBP22.15■■□□□ 1.14
USB1-201ENST00000219281 SAFB2Q14151 953 aaKnown RBP eCLIP22.15■■□□□ 1.14
USB1-201ENST00000219281 PUS7Q96PZ0 661 aaKnown RBP22.14■■□□□ 1.14
USB1-201ENST00000219281 EVC2Q86UK5 1308 aa22.14■■□□□ 1.13
USB1-201ENST00000219281 RTN4Q9NQC3 1192 aaKnown RBP22.14■■□□□ 1.13
USB1-201ENST00000219281 CLTCQ00610 1675 aaKnown RBP22.14■■□□□ 1.13
USB1-201ENST00000219281 CCDC27Q2M243 656 aa22.13■■□□□ 1.13
USB1-201ENST00000219281 TULP4Q9NRJ4 1543 aa22.13■■□□□ 1.13
USB1-201ENST00000219281 STAG3Q9UJ98 1225 aa22.13■■□□□ 1.13
USB1-201ENST00000219281 AAMPQ13685 434 aa22.11■■□□□ 1.13
USB1-201ENST00000219281 CABP2Q9NPB3 220 aa22.11■■□□□ 1.13
USB1-201ENST00000219281 VIRMAQ69YN4 1812 aaKnown RBP22.11■■□□□ 1.13
USB1-201ENST00000219281 U2AF1L5P0DN76 240 aaPredicted RBP22.11■■□□□ 1.13
USB1-201ENST00000219281 U2AF1Q01081 240 aaKnown RBP eCLIP22.11■■□□□ 1.13
USB1-201ENST00000219281 USP32Q8NFA0 1604 aa22.11■■□□□ 1.13
USB1-201ENST00000219281 MYH16Q9H6N6 1097 aa22.1■■□□□ 1.13
USB1-201ENST00000219281 SPATA31D1Q6ZQQ2 1576 aa22.09■■□□□ 1.13
USB1-201ENST00000219281 ARHGEF40Q8TER5 1519 aa22.09■■□□□ 1.13
USB1-201ENST00000219281 PDZRN3Q9UPQ7 1066 aa22.09■■□□□ 1.13
USB1-201ENST00000219281 ANKRD36BQ8N2N9 1353 aa22.09■■□□□ 1.13
USB1-201ENST00000219281 A2ML1A8K2U0 1454 aa22.09■■□□□ 1.13
USB1-201ENST00000219281 PTPRMP28827 1452 aa22.08■■□□□ 1.12
USB1-201ENST00000219281 BRPF3Q9ULD4 1205 aa22.08■■□□□ 1.12
USB1-201ENST00000219281 YTHDC2Q9H6S0 1430 aaKnown RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms