RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 GOLGA6L22H0YM25 854 aa15.54■□□□□ 0.08
TM9SF4-201ENST00000217315 NCLP19338 710 aaKnown RBP15.54■□□□□ 0.08
TM9SF4-201ENST00000217315 FBXO31Q5XUX0 539 aaPredicted RBP15.53■□□□□ 0.08
TM9SF4-201ENST00000217315 SLC4A10Q6U841 1118 aa15.53■□□□□ 0.08
TM9SF4-201ENST00000217315 EID1Q9Y6B2 187 aa15.53■□□□□ 0.08
TM9SF4-201ENST00000217315 PLEKHH1Q9ULM0 1364 aa15.53■□□□□ 0.08
TM9SF4-201ENST00000217315 TXNDC2Q86VQ3 553 aa15.53■□□□□ 0.08
TM9SF4-201ENST00000217315 GPRASP1Q5JY77 1395 aa15.53■□□□□ 0.08
TM9SF4-201ENST00000217315 PDZRN3Q9UPQ7 1066 aa15.52■□□□□ 0.08
TM9SF4-201ENST00000217315 AMPHP49418 695 aa15.52■□□□□ 0.08
TM9SF4-201ENST00000217315 LNPKQ9C0E8 428 aa15.52■□□□□ 0.08
TM9SF4-201ENST00000217315 WDR7Q9Y4E6 1490 aa15.52■□□□□ 0.08
TM9SF4-201ENST00000217315 LTV1Q96GA3 475 aaPredicted RBP15.52■□□□□ 0.07
TM9SF4-201ENST00000217315 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.51■□□□□ 0.07
TM9SF4-201ENST00000217315 RNF123Q5XPI4 1314 aa15.51■□□□□ 0.07
TM9SF4-201ENST00000217315 SAMD9LQ8IVG5 1584 aa15.51■□□□□ 0.07
TM9SF4-201ENST00000217315 KIF16BQ96L93 1317 aa15.51■□□□□ 0.07
TM9SF4-201ENST00000217315 NFKBIBQ15653 356 aa15.51■□□□□ 0.07
TM9SF4-201ENST00000217315 KDM5CP41229 1560 aa15.5■□□□□ 0.07
TM9SF4-201ENST00000217315 ARHGEF5Q12774 1597 aa15.5■□□□□ 0.07
TM9SF4-201ENST00000217315 NKTRP30414 1462 aaKnown RBP15.5■□□□□ 0.07
TM9SF4-201ENST00000217315 RARSP54136 660 aaKnown RBP15.5■□□□□ 0.07
TM9SF4-201ENST00000217315 WAPLQ7Z5K2 1190 aa15.5■□□□□ 0.07
TM9SF4-201ENST00000217315 ASXL1Q8IXJ9 1541 aa15.5■□□□□ 0.07
TM9SF4-201ENST00000217315 TMPOP42166 694 aaKnown RBP15.49■□□□□ 0.07
TM9SF4-201ENST00000217315 FOXD4L1Q9NU39 408 aa15.49■□□□□ 0.07
TM9SF4-201ENST00000217315 SPINK5Q9NQ38 1064 aaPredicted RBP15.48■□□□□ 0.07
TM9SF4-201ENST00000217315 NOB1Q9ULX3 412 aaKnown RBP15.48■□□□□ 0.07
TM9SF4-201ENST00000217315 AAMPQ13685 434 aa15.48■□□□□ 0.07
TM9SF4-201ENST00000217315 GSE1Q14687 1217 aa15.48■□□□□ 0.07
TM9SF4-201ENST00000217315 EIF2AK4Q9P2K8 1649 aaKnown RBP15.48■□□□□ 0.07
TM9SF4-201ENST00000217315 RTEL1-TNFRSF6BF6WH68 1400 aa15.48■□□□□ 0.07
TM9SF4-201ENST00000217315 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.47■□□□□ 0.07
TM9SF4-201ENST00000217315 STK31Q9BXU1 1019 aa15.47■□□□□ 0.07
TM9SF4-201ENST00000217315 ATAD2Q6PL18 1390 aa15.47■□□□□ 0.07
TM9SF4-201ENST00000217315 GNAI1P63096 354 aa15.47■□□□□ 0.07
TM9SF4-201ENST00000217315 PLA2R1Q13018 1463 aa15.46■□□□□ 0.07
TM9SF4-201ENST00000217315 MVPQ14764 893 aaKnown RBP15.46■□□□□ 0.07
TM9SF4-201ENST00000217315 TPRNQ4KMQ1 711 aa15.45■□□□□ 0.06
TM9SF4-201ENST00000217315 ATF7IPQ6VMQ6 1270 aa15.45■□□□□ 0.06
TM9SF4-201ENST00000217315 THUMPD2Q9BTF0 503 aaKnown RBP15.45■□□□□ 0.06
TM9SF4-201ENST00000217315 CDC42BPAQ5VT25 1732 aa15.45■□□□□ 0.06
TM9SF4-201ENST00000217315 OS9Q13438 667 aaPredicted RBP15.45■□□□□ 0.06
TM9SF4-201ENST00000217315 TRIM44Q96DX7 344 aaPredicted RBP15.45■□□□□ 0.06
TM9SF4-201ENST00000217315 MAST1Q9Y2H9 1570 aa15.45■□□□□ 0.06
TM9SF4-201ENST00000217315 TTC37Q6PGP7 1564 aa15.44■□□□□ 0.06
TM9SF4-201ENST00000217315 IGHDP01880 384 aa15.44■□□□□ 0.06
TM9SF4-201ENST00000217315 FBLN1P23142 703 aa15.44■□□□□ 0.06
TM9SF4-201ENST00000217315 C1orf115Q9H7X2 142 aa15.44■□□□□ 0.06
TM9SF4-201ENST00000217315 RRS1Q15050 365 aaKnown RBP15.43■□□□□ 0.06
TM9SF4-201ENST00000217315 BCORL1Q5H9F3 1711 aa15.43■□□□□ 0.06
TM9SF4-201ENST00000217315 SSH1Q8WYL5 1049 aa15.43■□□□□ 0.06
TM9SF4-201ENST00000217315 C22orf23Q9BZE7 217 aa15.43■□□□□ 0.06
TM9SF4-201ENST00000217315 ZNF518AQ6AHZ1 1483 aa15.42■□□□□ 0.06
TM9SF4-201ENST00000217315 API5Q9BZZ5 524 aaKnown RBP15.42■□□□□ 0.06
TM9SF4-201ENST00000217315 FRAT2O75474 233 aaPredicted RBP15.42■□□□□ 0.06
TM9SF4-201ENST00000217315 NINLQ9Y2I6 1382 aa15.42■□□□□ 0.06
TM9SF4-201ENST00000217315 NECTIN2Q92692 538 aa15.41■□□□□ 0.06
TM9SF4-201ENST00000217315 DMRT2Q9Y5R5 561 aa15.41■□□□□ 0.06
TM9SF4-201ENST00000217315 PIK3C2GO75747 1445 aa15.41■□□□□ 0.06
TM9SF4-201ENST00000217315 HMMRO75330 724 aa15.41■□□□□ 0.06
TM9SF4-201ENST00000217315 CFAP65Q6ZU64 1925 aaKnown RBP15.41■□□□□ 0.06
TM9SF4-201ENST00000217315 FCHSD2O94868 740 aa15.4■□□□□ 0.06
TM9SF4-201ENST00000217315 TWISTNBQ3B726 338 aaPredicted RBP15.4■□□□□ 0.06
TM9SF4-201ENST00000217315 CT47B1P0C2W7 299 aaPredicted RBP15.4■□□□□ 0.06
TM9SF4-201ENST00000217315 L1TD1Q5T7N2 865 aaKnown RBP15.4■□□□□ 0.06
TM9SF4-201ENST00000217315 NUTM2GQ5VZR2 741 aa15.4■□□□□ 0.06
TM9SF4-201ENST00000217315 TMEM57Q8N5G2 664 aa15.4■□□□□ 0.06
TM9SF4-201ENST00000217315 SLC26A8Q96RN1 970 aa15.4■□□□□ 0.06
TM9SF4-201ENST00000217315 ERCC6L2Q5T890 1561 aa15.39■□□□□ 0.05
TM9SF4-201ENST00000217315 SULT6B1Q6IMI4 303 aa15.39■□□□□ 0.05
TM9SF4-201ENST00000217315 MAGI2Q86UL8 1455 aa15.39■□□□□ 0.05
TM9SF4-201ENST00000217315 ATP7AQ04656 1500 aa15.39■□□□□ 0.05
TM9SF4-201ENST00000217315 TNNQ9UQP3 1299 aa15.39■□□□□ 0.05
TM9SF4-201ENST00000217315 GBP4Q96PP9 640 aa15.39■□□□□ 0.05
TM9SF4-201ENST00000217315 CFAP44Q96MT7 982 aa15.38■□□□□ 0.05
TM9SF4-201ENST00000217315 PREX2Q70Z35 1606 aa15.38■□□□□ 0.05
TM9SF4-201ENST00000217315 FYB1O15117 783 aa15.38■□□□□ 0.05
TM9SF4-201ENST00000217315 NME9Q86XW9 330 aa15.38■□□□□ 0.05
TM9SF4-201ENST00000217315 EMILIN1Q9Y6C2 1016 aa15.38■□□□□ 0.05
TM9SF4-201ENST00000217315 CCDC61Q9Y6R9 512 aa15.38■□□□□ 0.05
TM9SF4-201ENST00000217315 MYO5CQ9NQX4 1742 aa15.38■□□□□ 0.05
TM9SF4-201ENST00000217315 POLR3AO14802 1390 aaPredicted RBP15.38■□□□□ 0.05
TM9SF4-201ENST00000217315 ADCY10Q96PN6 1610 aa15.37■□□□□ 0.05
TM9SF4-201ENST00000217315 NUDT16Q96DE0 195 aaKnown RBP15.37■□□□□ 0.05
TM9SF4-201ENST00000217315 ATP10AO60312 1499 aa15.37■□□□□ 0.05
TM9SF4-201ENST00000217315 TRIM6-TRIM34B2RNG4 842 aa15.37■□□□□ 0.05
TM9SF4-201ENST00000217315 KDM5DQ9BY66 1539 aa15.37■□□□□ 0.05
TM9SF4-201ENST00000217315 PCDHB15Q9Y5E8 787 aa15.36■□□□□ 0.05
TM9SF4-201ENST00000217315 TRIM27P14373 513 aa15.36■□□□□ 0.05
TM9SF4-201ENST00000217315 TSPYL4Q9UJ04 414 aa15.36■□□□□ 0.05
TM9SF4-201ENST00000217315 BLMP54132 1417 aaPredicted RBP15.36■□□□□ 0.05
TM9SF4-201ENST00000217315 ANKRD36BQ8N2N9 1353 aa15.35■□□□□ 0.05
TM9SF4-201ENST00000217315 DCTN1Q14203 1278 aa15.35■□□□□ 0.05
TM9SF4-201ENST00000217315 NLRP6P59044 892 aa15.35■□□□□ 0.05
TM9SF4-201ENST00000217315 NFE2L2Q16236 605 aa15.35■□□□□ 0.05
TM9SF4-201ENST00000217315 NPC1L1Q9UHC9 1359 aa15.35■□□□□ 0.05
TM9SF4-201ENST00000217315 RLBP1P12271 317 aa15.34■□□□□ 0.05
TM9SF4-201ENST00000217315 MCCP23508 829 aa15.34■□□□□ 0.05
TM9SF4-201ENST00000217315 GOLGA6L3A6NEY3 463 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms