RNA–Protein interactions for RNA: ENST00000216361.8

COCH-201, Transcript of cochlin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COCH, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-201ENST00000216361 FRAT2O75474 233 aaPredicted RBP26.56■■□□□ 1.84
COCH-201ENST00000216361 NOS1P29475 1434 aa26.56■■□□□ 1.84
COCH-201ENST00000216361 ADGRB3O60242 1522 aa26.55■■□□□ 1.84
COCH-201ENST00000216361 LMTK2Q8IWU2 1503 aa26.55■■□□□ 1.84
COCH-201ENST00000216361 RARSP54136 660 aaKnown RBP26.55■■□□□ 1.84
COCH-201ENST00000216361 RTN4Q9NQC3 1192 aaKnown RBP26.55■■□□□ 1.84
COCH-201ENST00000216361 SEC24BO95487 1268 aa26.53■■□□□ 1.84
COCH-201ENST00000216361 BRPF3Q9ULD4 1205 aa26.53■■□□□ 1.84
COCH-201ENST00000216361 AAMPQ13685 434 aa26.52■■□□□ 1.84
COCH-201ENST00000216361 TCP11L2Q8N4U5 519 aa26.52■■□□□ 1.84
COCH-201ENST00000216361 SLC12A5Q9H2X9 1139 aa26.51■■□□□ 1.84
COCH-201ENST00000216361 RRP7AQ9Y3A4 280 aaKnown RBP26.51■■□□□ 1.84
COCH-201ENST00000216361 WDR63Q8IWG1 891 aa26.51■■□□□ 1.83
COCH-201ENST00000216361 ZC3H13Q5T200 1668 aaKnown RBP26.5■■□□□ 1.83
COCH-201ENST00000216361 NEUROD2Q15784 382 aa26.5■■□□□ 1.83
COCH-201ENST00000216361 NLRP1Q9C000 1473 aa26.5■■□□□ 1.83
COCH-201ENST00000216361 TNNT2P45379 298 aaPredicted RBP26.49■■□□□ 1.83
COCH-201ENST00000216361 TRAK1Q9UPV9 953 aa26.49■■□□□ 1.83
COCH-201ENST00000216361 PMFBP1Q8TBY8 1022 aa26.49■■□□□ 1.83
COCH-201ENST00000216361 C14orf93Q9H972 538 aaKnown RBP26.49■■□□□ 1.83
COCH-201ENST00000216361 ADGRB1O14514 1584 aa26.48■■□□□ 1.83
COCH-201ENST00000216361 USP32Q8NFA0 1604 aa26.48■■□□□ 1.83
COCH-201ENST00000216361 ZNF518AQ6AHZ1 1483 aa26.48■■□□□ 1.83
COCH-201ENST00000216361 KIDINS220Q9ULH0 1771 aa26.47■■□□□ 1.83
COCH-201ENST00000216361 QRICH2Q9H0J4 1663 aa26.47■■□□□ 1.83
COCH-201ENST00000216361 RLBP1P12271 317 aa26.47■■□□□ 1.83
COCH-201ENST00000216361 CCDC27Q2M243 656 aa26.47■■□□□ 1.83
COCH-201ENST00000216361 PCDHB15Q9Y5E8 787 aa26.47■■□□□ 1.83
COCH-201ENST00000216361 ZMYM3Q14202 1370 aa26.46■■□□□ 1.83
COCH-201ENST00000216361 MTHFSP49914 203 aa26.44■■□□□ 1.82
COCH-201ENST00000216361 TNNQ9UQP3 1299 aa26.44■■□□□ 1.82
COCH-201ENST00000216361 CHGAP10645 457 aaKnown RBP26.43■■□□□ 1.82
COCH-201ENST00000216361 PPLO60437 1756 aa26.43■■□□□ 1.82
COCH-201ENST00000216361 NCBP3Q53F19 620 aaKnown RBP26.42■■□□□ 1.82
COCH-201ENST00000216361 BECN1Q14457 450 aa26.42■■□□□ 1.82
COCH-201ENST00000216361 ANO8Q9HCE9 1232 aaPredicted RBP26.41■■□□□ 1.82
COCH-201ENST00000216361 NPATQ14207 1427 aa26.4■■□□□ 1.82
COCH-201ENST00000216361 CFAP53Q96M91 514 aa26.4■■□□□ 1.82
COCH-201ENST00000216361 TMEM132EQ6IEE7 984 aa26.39■■□□□ 1.82
COCH-201ENST00000216361 BCL2L13Q9BXK5 485 aa26.39■■□□□ 1.82
COCH-201ENST00000216361 PDZRN3Q9UPQ7 1066 aa26.39■■□□□ 1.82
COCH-201ENST00000216361 MYH16Q9H6N6 1097 aa26.37■■□□□ 1.81
COCH-201ENST00000216361 PUS7Q96PZ0 661 aaKnown RBP26.36■■□□□ 1.81
COCH-201ENST00000216361 RPGRIP1LQ68CZ1 1315 aa26.36■■□□□ 1.81
COCH-201ENST00000216361 TBC1D32Q96NH3 1257 aa26.36■■□□□ 1.81
COCH-201ENST00000216361 RWDD1Q9H446 243 aaPredicted RBP26.36■■□□□ 1.81
COCH-201ENST00000216361 ASXL2Q76L83 1435 aa26.35■■□□□ 1.81
COCH-201ENST00000216361 NSD2O96028 1365 aa26.35■■□□□ 1.81
COCH-201ENST00000216361 ANKRD36BQ8N2N9 1353 aa26.34■■□□□ 1.81
COCH-201ENST00000216361 ANTXR1Q9H6X2 564 aa26.34■■□□□ 1.81
COCH-201ENST00000216361 ADGRB2O60241 1585 aa26.34■■□□□ 1.81
COCH-201ENST00000216361 MVPQ14764 893 aaKnown RBP26.33■■□□□ 1.81
COCH-201ENST00000216361 UPF2Q9HAU5 1272 aaKnown RBP26.32■■□□□ 1.8
COCH-201ENST00000216361 TULP4Q9NRJ4 1543 aa26.32■■□□□ 1.8
COCH-201ENST00000216361 FRMPD1Q5SYB0 1578 aa26.31■■□□□ 1.8
COCH-201ENST00000216361 U2AF1L5P0DN76 240 aaPredicted RBP26.31■■□□□ 1.8
COCH-201ENST00000216361 U2AF1Q01081 240 aaKnown RBP eCLIP26.31■■□□□ 1.8
COCH-201ENST00000216361 EVC2Q86UK5 1308 aa26.3■■□□□ 1.8
COCH-201ENST00000216361 GLI2P10070 1586 aa26.3■■□□□ 1.8
COCH-201ENST00000216361 SLKQ9H2G2 1235 aaPredicted RBP26.3■■□□□ 1.8
COCH-201ENST00000216361 ZKSCAN2Q63HK3 967 aa26.29■■□□□ 1.8
COCH-201ENST00000216361 CT47B1P0C2W7 299 aaPredicted RBP26.28■■□□□ 1.8
COCH-201ENST00000216361 POGKQ9P215 609 aa26.27■■□□□ 1.8
COCH-201ENST00000216361 HECW2Q9P2P5 1572 aa26.27■■□□□ 1.8
COCH-201ENST00000216361 TBC1D2Q9BYX2 928 aa26.27■■□□□ 1.8
COCH-201ENST00000216361 DZIP1LQ8IYY4 767 aaKnown RBP26.26■■□□□ 1.79
COCH-201ENST00000216361 GGT6Q6P531 493 aa26.26■■□□□ 1.79
COCH-201ENST00000216361 ARHGEF28Q8N1W1 1705 aaKnown RBP26.26■■□□□ 1.79
COCH-201ENST00000216361 ABCC3O15438 1527 aa26.25■■□□□ 1.79
COCH-201ENST00000216361 MLH3Q9UHC1 1453 aa26.24■■□□□ 1.79
COCH-201ENST00000216361 POGZQ7Z3K3 1410 aa26.24■■□□□ 1.79
COCH-201ENST00000216361 FTSJ3Q8IY81 847 aaKnown RBP26.24■■□□□ 1.79
COCH-201ENST00000216361 TSR2Q969E8 191 aaKnown RBP26.22■■□□□ 1.79
COCH-201ENST00000216361 PLEKHF1Q96S99 279 aa26.22■■□□□ 1.79
COCH-201ENST00000216361 CFAP65Q6ZU64 1925 aaKnown RBP26.22■■□□□ 1.79
COCH-201ENST00000216361 CD109Q6YHK3 1445 aa26.22■■□□□ 1.79
COCH-201ENST00000216361 CABP2Q9NPB3 220 aa26.21■■□□□ 1.79
COCH-201ENST00000216361 ABCC11Q96J66 1382 aa26.2■■□□□ 1.79
COCH-201ENST00000216361 NEXMIFQ5QGS0 1516 aa26.2■■□□□ 1.79
COCH-201ENST00000216361 VGFO15240 615 aaPredicted RBP26.2■■□□□ 1.78
COCH-201ENST00000216361 EXOSC9Q06265 439 aaKnown RBP26.2■■□□□ 1.78
COCH-201ENST00000216361 HDAC1Q13547 482 aaPredicted RBP26.2■■□□□ 1.78
COCH-201ENST00000216361 CAMSAP1Q5T5Y3 1602 aa26.2■■□□□ 1.78
COCH-201ENST00000216361 TRIM27P14373 513 aa26.19■■□□□ 1.78
COCH-201ENST00000216361 SMC4Q9NTJ3 1288 aa26.19■■□□□ 1.78
COCH-201ENST00000216361 TRIM35Q9UPQ4 493 aa26.19■■□□□ 1.78
COCH-201ENST00000216361 PIK3C2BO00750 1634 aa26.19■■□□□ 1.78
COCH-201ENST00000216361 COL3A1P02461 1466 aaPredicted RBP26.19■■□□□ 1.78
COCH-201ENST00000216361 TMPOP42166 694 aaKnown RBP26.18■■□□□ 1.78
COCH-201ENST00000216361 NUTM2DQ5VT03 806 aaPredicted RBP26.18■■□□□ 1.78
COCH-201ENST00000216361 A0A1W2PP64 1363 aa26.18■■□□□ 1.78
COCH-201ENST00000216361 SIGLEC1Q9BZZ2 1709 aa26.17■■□□□ 1.78
COCH-201ENST00000216361 SSH1Q8WYL5 1049 aa26.17■■□□□ 1.78
COCH-201ENST00000216361 FAM43AQ8N2R8 423 aa26.15■■□□□ 1.78
COCH-201ENST00000216361 DDX19BQ9UMR2 479 aa26.15■■□□□ 1.78
COCH-201ENST00000216361 IL16Q14005 1332 aa26.14■■□□□ 1.78
COCH-201ENST00000216361 ATF7IPQ6VMQ6 1270 aa26.14■■□□□ 1.78
COCH-201ENST00000216361 CFAP74Q9C0B2 1584 aa26.14■■□□□ 1.78
COCH-201ENST00000216361 U2SURPO15042 1029 aaKnown RBP26.14■■□□□ 1.77
COCH-201ENST00000216361 C22orf23Q9BZE7 217 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms