RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 TOM1O60784 492 aa17.15■□□□□ 0.34
SYPL1-201ENST00000011473 ATF3P18847 181 aa17.14■□□□□ 0.33
SYPL1-201ENST00000011473 MINK1Q8N4C8 1332 aaPredicted RBP17.14■□□□□ 0.33
SYPL1-201ENST00000011473 SIRT1Q96EB6 747 aa17.14■□□□□ 0.33
SYPL1-201ENST00000011473 DLC1Q96QB1 1528 aa17.14■□□□□ 0.33
SYPL1-201ENST00000011473 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.13■□□□□ 0.33
SYPL1-201ENST00000011473 GPRASP1Q5JY77 1395 aa17.13■□□□□ 0.33
SYPL1-201ENST00000011473 NUTM2FA1L443 756 aa17.13■□□□□ 0.33
SYPL1-201ENST00000011473 FBXO41Q8TF61 875 aa17.12■□□□□ 0.33
SYPL1-201ENST00000011473 CADPS2Q86UW7 1296 aa17.12■□□□□ 0.33
SYPL1-201ENST00000011473 ARHGEF28Q8N1W1 1705 aaKnown RBP17.11■□□□□ 0.33
SYPL1-201ENST00000011473 SLAIN2Q9P270 581 aa17.11■□□□□ 0.33
SYPL1-201ENST00000011473 CENPJQ9HC77 1338 aaPredicted RBP17.09■□□□□ 0.33
SYPL1-201ENST00000011473 DCCP43146 1447 aa17.08■□□□□ 0.33
SYPL1-201ENST00000011473 ILDR1Q86SU0 546 aaPredicted RBP17.08■□□□□ 0.33
SYPL1-201ENST00000011473 MST1RQ04912 1400 aa17.07■□□□□ 0.32
SYPL1-201ENST00000011473 CDC42BPGQ6DT37 1551 aa17.05■□□□□ 0.32
SYPL1-201ENST00000011473 EIF3AQ14152 1382 aaKnown RBP17.05■□□□□ 0.32
SYPL1-201ENST00000011473 ORAI2Q96SN7 254 aa17.05■□□□□ 0.32
SYPL1-201ENST00000011473 C1orf167Q5SNV9 1468 aa17.04■□□□□ 0.32
SYPL1-201ENST00000011473 ST20-MTHFSA0A0A6YYL1 179 aa17.03■□□□□ 0.32
SYPL1-201ENST00000011473 BRINP3Q76B58 766 aa17.03■□□□□ 0.32
SYPL1-201ENST00000011473 USP47Q96K76 1375 aa17.03■□□□□ 0.32
SYPL1-201ENST00000011473 WASLO00401 505 aaPredicted RBP17.03■□□□□ 0.32
SYPL1-201ENST00000011473 ROBO1Q9Y6N7 1651 aa17.02■□□□□ 0.31
SYPL1-201ENST00000011473 ESCO1Q5FWF5 840 aa17.02■□□□□ 0.31
SYPL1-201ENST00000011473 DDX17Q92841 729 aaKnown RBP17.02■□□□□ 0.31
SYPL1-201ENST00000011473 QRICH2Q9H0J4 1663 aa17.01■□□□□ 0.31
SYPL1-201ENST00000011473 CDK19Q9BWU1 502 aa17.01■□□□□ 0.31
SYPL1-201ENST00000011473 ADGRB2O60241 1585 aa17.01■□□□□ 0.31
SYPL1-201ENST00000011473 HSPA1LP34931 641 aa17■□□□□ 0.31
SYPL1-201ENST00000011473 PRR36Q9H6K5 1346 aa17■□□□□ 0.31
SYPL1-201ENST00000011473 CABP2Q9NPB3 220 aa16.99■□□□□ 0.31
SYPL1-201ENST00000011473 SRPK2P78362 688 aaKnown RBP16.99■□□□□ 0.31
SYPL1-201ENST00000011473 FMN2Q9NZ56 1722 aa16.99■□□□□ 0.31
SYPL1-201ENST00000011473 TULP4Q9NRJ4 1543 aa16.98■□□□□ 0.31
SYPL1-201ENST00000011473 PMFBP1Q8TBY8 1022 aa16.97■□□□□ 0.31
SYPL1-201ENST00000011473 TESK2Q96S53 571 aa16.97■□□□□ 0.31
SYPL1-201ENST00000011473 USP32Q8NFA0 1604 aa16.96■□□□□ 0.31
SYPL1-201ENST00000011473 FOXO3O43524 673 aa16.96■□□□□ 0.3
SYPL1-201ENST00000011473 NUDT16Q96DE0 195 aaKnown RBP16.96■□□□□ 0.3
SYPL1-201ENST00000011473 EVC2Q86UK5 1308 aa16.95■□□□□ 0.3
SYPL1-201ENST00000011473 XPCQ01831 940 aaPredicted RBP16.95■□□□□ 0.3
SYPL1-201ENST00000011473 ATP7BP35670 1465 aa16.95■□□□□ 0.3
SYPL1-201ENST00000011473 HSPA5P11021 654 aaKnown RBP16.94■□□□□ 0.3
SYPL1-201ENST00000011473 SBNO2Q9Y2G9 1366 aa16.94■□□□□ 0.3
SYPL1-201ENST00000011473 EIF4G2P78344 907 aaKnown RBP eCLIP16.93■□□□□ 0.3
SYPL1-201ENST00000011473 ANKARQ7Z5J8 1434 aa16.93■□□□□ 0.3
SYPL1-201ENST00000011473 PHF8Q9UPP1 1060 aa16.93■□□□□ 0.3
SYPL1-201ENST00000011473 RGPD8O14715 1765 aaPredicted RBP16.92■□□□□ 0.3
SYPL1-201ENST00000011473 CCDC61Q9Y6R9 512 aa16.91■□□□□ 0.3
SYPL1-201ENST00000011473 DISP3Q9P2K9 1392 aa16.91■□□□□ 0.3
SYPL1-201ENST00000011473 CABP1Q9NZU7 370 aa16.89■□□□□ 0.29
SYPL1-201ENST00000011473 PPIP5K1Q6PFW1 1433 aa16.88■□□□□ 0.29
SYPL1-201ENST00000011473 NPHP3Q7Z494 1330 aa16.88■□□□□ 0.29
SYPL1-201ENST00000011473 AHDC1Q5TGY3 1603 aaPredicted RBP16.88■□□□□ 0.29
SYPL1-201ENST00000011473 PHLPP1O60346 1717 aa16.88■□□□□ 0.29
SYPL1-201ENST00000011473 NGDNQ8NEJ9 315 aaKnown RBP16.88■□□□□ 0.29
SYPL1-201ENST00000011473 TMF1P82094 1093 aa16.87■□□□□ 0.29
SYPL1-201ENST00000011473 COL16A1Q07092 1604 aaPredicted RBP16.86■□□□□ 0.29
SYPL1-201ENST00000011473 NHSL1Q5SYE7 1610 aa16.86■□□□□ 0.29
SYPL1-201ENST00000011473 PSME1Q06323 249 aa16.86■□□□□ 0.29
SYPL1-201ENST00000011473 ACEP12821 1306 aa16.86■□□□□ 0.29
SYPL1-201ENST00000011473 SOS2Q07890 1332 aaPredicted RBP16.86■□□□□ 0.29
SYPL1-201ENST00000011473 TMC1Q8TDI8 760 aa16.85■□□□□ 0.29
SYPL1-201ENST00000011473 KRT28Q7Z3Y7 464 aa16.85■□□□□ 0.29
SYPL1-201ENST00000011473 POLR3GLQ9BT43 218 aa16.85■□□□□ 0.29
SYPL1-201ENST00000011473 ATAD2Q6PL18 1390 aa16.85■□□□□ 0.29
SYPL1-201ENST00000011473 PXDNQ92626 1479 aa16.85■□□□□ 0.29
SYPL1-201ENST00000011473 TOPAZ1Q8N9V7 1692 aa16.84■□□□□ 0.29
SYPL1-201ENST00000011473 KIF1AQ12756 1690 aa16.84■□□□□ 0.29
SYPL1-201ENST00000011473 PLEKHG3A1L390 1219 aa16.84■□□□□ 0.29
SYPL1-201ENST00000011473 SLC12A5Q9H2X9 1139 aa16.84■□□□□ 0.29
SYPL1-201ENST00000011473 C11orf95C9JLR9 678 aaPredicted RBP16.83■□□□□ 0.28
SYPL1-201ENST00000011473 PLEKHG5O94827 1062 aa16.83■□□□□ 0.28
SYPL1-201ENST00000011473 LRRC59Q96AG4 307 aaKnown RBP16.82■□□□□ 0.28
SYPL1-201ENST00000011473 POLR3AO14802 1390 aaPredicted RBP16.82■□□□□ 0.28
SYPL1-201ENST00000011473 ITSN1Q15811 1721 aa16.82■□□□□ 0.28
SYPL1-201ENST00000011473 SLC24A1O60721 1099 aa16.81■□□□□ 0.28
SYPL1-201ENST00000011473 PAK3O75914 559 aaPredicted RBP16.81■□□□□ 0.28
SYPL1-201ENST00000011473 LMOD2Q6P5Q4 547 aa16.81■□□□□ 0.28
SYPL1-201ENST00000011473 ZEB1P37275 1124 aaPredicted RBP16.81■□□□□ 0.28
SYPL1-201ENST00000011473 JCADQ9P266 1359 aa16.8■□□□□ 0.28
SYPL1-201ENST00000011473 SPATA31A3Q5VYP0 1347 aa16.78■□□□□ 0.28
SYPL1-201ENST00000011473 PNPLA6Q8IY17 1366 aa16.78■□□□□ 0.28
SYPL1-201ENST00000011473 CDCA8Q53HL2 280 aa16.78■□□□□ 0.28
SYPL1-201ENST00000011473 PUS7Q96PZ0 661 aaKnown RBP16.78■□□□□ 0.28
SYPL1-201ENST00000011473 CD163L1Q9NR16 1453 aa16.77■□□□□ 0.28
SYPL1-201ENST00000011473 NUTM2BA6NNL0 878 aaPredicted RBP16.77■□□□□ 0.28
SYPL1-201ENST00000011473 NUTM2EB1AL46 878 aaPredicted RBP16.77■□□□□ 0.28
SYPL1-201ENST00000011473 NUTM2GQ5VZR2 741 aa16.77■□□□□ 0.28
SYPL1-201ENST00000011473 NUTM2AQ8IVF1 878 aaPredicted RBP16.77■□□□□ 0.28
SYPL1-201ENST00000011473 TNS3Q68CZ2 1445 aa16.77■□□□□ 0.27
SYPL1-201ENST00000011473 USP6P35125 1406 aa16.76■□□□□ 0.27
SYPL1-201ENST00000011473 A0A1W2PP64 1363 aa16.76■□□□□ 0.27
SYPL1-201ENST00000011473 SBNO1A3KN83 1393 aa16.75■□□□□ 0.27
SYPL1-201ENST00000011473 CABLES1Q8TDN4 633 aa16.75■□□□□ 0.27
SYPL1-201ENST00000011473 CPSF1Q10570 1443 aaKnown RBP16.75■□□□□ 0.27
SYPL1-201ENST00000011473 KTN1Q86UP2 1357 aaKnown RBP16.75■□□□□ 0.27
SYPL1-201ENST00000011473 KIF7Q2M1P5 1343 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms