RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Esx1O88933 382 aa19.17■□□□□ 0.66
Clcn3-203ENSMUST00000093490 Taok2Q6ZQ29 1240 aa19.17■□□□□ 0.66
Clcn3-203ENSMUST00000093490 Gripap1Q8VD04 806 aa19.17■□□□□ 0.66
Clcn3-203ENSMUST00000093490 Znf710Q3U288 666 aa19.16■□□□□ 0.66
Clcn3-203ENSMUST00000093490 Ric3Q8BPM6 367 aa19.16■□□□□ 0.66
Clcn3-203ENSMUST00000093490 TkfcQ8VC30 578 aa19.16■□□□□ 0.66
Clcn3-203ENSMUST00000093490 UvssaQ9D479 717 aa19.16■□□□□ 0.66
Clcn3-203ENSMUST00000093490 TefQ9JLC6 301 aa19.16■□□□□ 0.66
Clcn3-203ENSMUST00000093490 Zranb3Q6NZP1 1069 aa19.16■□□□□ 0.66
Clcn3-203ENSMUST00000093490 Cyb5rlB1AS42 316 aa19.15■□□□□ 0.66
Clcn3-203ENSMUST00000093490 Dennd6aQ8BH65 605 aa19.15■□□□□ 0.66
Clcn3-203ENSMUST00000093490 Ubap1lG3UW59 384 aa19.15■□□□□ 0.66
Clcn3-203ENSMUST00000093490 Erc2Q6PH08 957 aa19.15■□□□□ 0.66
Clcn3-203ENSMUST00000093490 Cetn4Q8K4K1 168 aa19.15■□□□□ 0.66
Clcn3-203ENSMUST00000093490 Cdk19Q8BWD8 501 aa19.14■□□□□ 0.66
Clcn3-203ENSMUST00000093490 Zeb2Q9R0G7 1215 aa19.14■□□□□ 0.66
Clcn3-203ENSMUST00000093490 Cavin4A2AMM0 362 aa19.14■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Ccdc173A0JLY1 547 aa19.14■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Rfx7F8VPJ6 1459 aa19.14■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Rbm25B2RY56 838 aaKnown RBP19.14■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Ccdc30Q8BVF4 654 aa19.14■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Rnf20Q5DTM8 973 aa19.14■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Q8C5K5 320 aa19.14■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Gm21698A0A087WQP8 267 aa19.13■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Gm21671G3UY31 267 aa19.13■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Smg7Q5RJH6 1138 aaKnown RBP19.13■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Rfx1P48377 963 aa19.13■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Sh3bgrQ9WUZ7 214 aa19.13■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Sv2bQ8BG39 683 aa19.12■□□□□ 0.65
Clcn3-203ENSMUST00000093490 IbtkQ6ZPR6 1352 aaKnown RBP19.12■□□□□ 0.65
Clcn3-203ENSMUST00000093490 A0A1L1SQF0 893 aa19.12■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Dhx16G3X8X0 1044 aaKnown RBP19.12■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Tpm1P58771 284 aa19.12■□□□□ 0.65
Clcn3-203ENSMUST00000093490 PsapQ61207 557 aaKnown RBP19.12■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Pdcl3Q8BVF2 240 aa19.12■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Tomm22Q9CPQ3 142 aa19.12■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Hmgn5Q9JL35 406 aa19.12■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Eva1cP58659 440 aa19.11■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Atp10dQ8K2X1 1416 aa19.11■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Pcf11G3X9Z4 1553 aa19.11■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Cc2d1aQ8K1A6 943 aa19.11■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Ttc21bQ0HA38 1315 aa19.11■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Utp3Q9JI13 469 aaKnown RBP19.11■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Taf3Q5HZG4 932 aa19.11■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Triml2E9PW10 424 aa19.1■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Rpgrip1lQ8CG73 1264 aa19.1■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Hap1O35668 628 aa19.09■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Ccdc183A2AJB1 534 aa19.09■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Hoxa7P02830 229 aa19.09■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Ppp2r1aQ76MZ3 589 aa19.09■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Tpm2P58774 284 aa19.08■□□□□ 0.65
Clcn3-203ENSMUST00000093490 DroshaQ5HZJ0 1373 aaKnown RBP19.08■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Ccdc34Q3UI66 367 aa19.08■□□□□ 0.65
Clcn3-203ENSMUST00000093490 4930572O03RikQ8C5Y0 211 aa19.08■□□□□ 0.65
Clcn3-203ENSMUST00000093490 Fbln2P37889 1221 aa19.08■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Fbxo2Q80UW2 297 aa19.08■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Fancd2Q80V62 1450 aa19.08■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Fchsd2Q3USJ8 740 aa19.08■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Gm21969J3QJZ1 289 aa19.08■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Dhx9O70133 1380 aaKnown RBP19.07■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Cfdp1O88271 295 aaKnown RBP19.07■□□□□ 0.64
Clcn3-203ENSMUST00000093490 EzrP26040 586 aaKnown RBP19.07■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Plekhg5Q66T02 1073 aa19.07■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Mcm2P97310 904 aa19.06■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Chrna2Q91X60 512 aa19.06■□□□□ 0.64
Clcn3-203ENSMUST00000093490 CrcpO35427 148 aa19.05■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Tpm4Q6IRU2 248 aa19.05■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Asxl1P59598 1514 aa19.05■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Naip2Q9QUK4 1447 aa19.05■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Ttll13A4Q9F6 804 aa19.05■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Pknox2Q8BG99 474 aa19.04■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Ddx54Q8K4L0 874 aaKnown RBP19.04■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Kcnh5Q920E3 988 aa19.04■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Ppp2r3aB2RXC8 1150 aa19.04■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Abcc5Q9R1X5 1436 aa19.04■□□□□ 0.64
Clcn3-203ENSMUST00000093490 HnrnpmQ9D0E1 729 aaKnown RBP19.03■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Eif3aP23116 1344 aaKnown RBP19.03■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Smc3Q9CW03 1217 aaKnown RBP19.03■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Kif3aP28741 701 aa19.02■□□□□ 0.64
Clcn3-203ENSMUST00000093490 Gabpb2P81069 414 aa19.02■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Cchcr1Q8K2I2 770 aa19.02■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Ipo7Q9EPL8 1038 aaKnown RBP19.02■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Hook1Q8BIL5 728 aa19.01■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Rapgef6Q5NCJ1 1609 aa19.01■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Stard3nlQ9DCI3 235 aa19.01■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Cnnm1Q0GA42 951 aa19.01■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Mphosph10Q810V0 681 aaKnown RBP19■□□□□ 0.63
Clcn3-203ENSMUST00000093490 OptnQ8K3K8 584 aa19■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Neurod6P48986 337 aa19■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Bicd2Q921C5 820 aa19■□□□□ 0.63
Clcn3-203ENSMUST00000093490 AI481877A2ALV5 1481 aa19■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Vps53Q8CCB4 832 aa18.99■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Prl7d1P04769 244 aa18.99■□□□□ 0.63
Clcn3-203ENSMUST00000093490 1700010I14RikQ7TPG0 532 aa18.99■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Kri1Q8VDQ9 704 aaKnown RBP18.99■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Noc3lQ8VI84 807 aaKnown RBP18.99■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Plcd4Q8K3R3 807 aa18.99■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Isy1Q69ZQ2 285 aaKnown RBP18.98■□□□□ 0.63
Clcn3-203ENSMUST00000093490 Pank1Q8K4K6 548 aa18.98■□□□□ 0.63
Clcn3-203ENSMUST00000093490 KarsQ99MN1 595 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms