RNA–Protein interactions for RNA: ENSMUST00000070478.3

Sdc3-201, Transcript of Syndecan-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc3, Length 4,973 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3-201ENSMUST00000070478 Gm21969J3QJZ1 289 aa21.65■■□□□ 1.06
Sdc3-201ENSMUST00000070478 Hmox1P14901 289 aa21.65■■□□□ 1.06
Sdc3-201ENSMUST00000070478 MsnP26041 577 aaKnown RBP21.65■■□□□ 1.06
Sdc3-201ENSMUST00000070478 Tomm22Q9CPQ3 142 aa21.65■■□□□ 1.06
Sdc3-201ENSMUST00000070478 Slc52a2Q9D8F3 450 aa21.64■■□□□ 1.06
Sdc3-201ENSMUST00000070478 SynmQ70IV5 1561 aa21.64■■□□□ 1.06
Sdc3-201ENSMUST00000070478 Eva1cP58659 440 aa21.64■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Dennd6aQ8BH65 605 aa21.64■■□□□ 1.05
Sdc3-201ENSMUST00000070478 NexmifQ5DTT1 1515 aa21.64■■□□□ 1.05
Sdc3-201ENSMUST00000070478 AqrQ8CFQ3 1481 aaKnown RBP21.64■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Mre11Q61216 706 aa21.64■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Chrna2Q91X60 512 aa21.64■■□□□ 1.05
Sdc3-201ENSMUST00000070478 CrcpO35427 148 aa21.63■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Calcoco2A2A6M5 331 aa21.63■■□□□ 1.05
Sdc3-201ENSMUST00000070478 PhaxQ9JJT9 385 aaKnown RBP21.63■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Cspp1B2RX88 1205 aa21.63■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Rabep1O35551 862 aa21.63■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Sh3bgrQ9WUZ7 214 aa21.63■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Gimap6Q8K349 305 aa21.62■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Gm21698A0A087WQP8 267 aa21.61■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Gm21671G3UY31 267 aa21.61■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Cabp2Q9JLK4 216 aa21.61■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Dusp27Q148W8 1138 aa21.6■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Smg7Q5RJH6 1138 aaKnown RBP21.6■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Cnnm1Q0GA42 951 aa21.6■■□□□ 1.05
Sdc3-201ENSMUST00000070478 TefQ9JLC6 301 aa21.6■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Cyp46a1Q9WVK8 500 aa21.6■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Evc2Q8K1G2 1220 aa21.6■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Nek4Q9Z1J2 792 aa21.6■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Abcc5Q9R1X5 1436 aa21.6■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Ttc21bQ0HA38 1315 aa21.6■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Glipr1l2Q9CQ35 332 aa21.6■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Fkbp4P30416 458 aa21.59■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Naip2Q9QUK4 1447 aa21.59■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Vps53Q8CCB4 832 aa21.59■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Sf3b2Q3UJB0 878 aaKnown RBP21.59■■□□□ 1.05
Sdc3-201ENSMUST00000070478 PsapQ61207 557 aaKnown RBP21.59■■□□□ 1.05
Sdc3-201ENSMUST00000070478 SkilQ60665 675 aa21.59■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Ddx54Q8K4L0 874 aaKnown RBP21.58■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Grin2aP35436 1464 aa21.58■■□□□ 1.05
Sdc3-201ENSMUST00000070478 Srek1Q8BZX4 494 aaKnown RBP21.58■■□□□ 1.04
Sdc3-201ENSMUST00000070478 Krt82Q99M74 516 aa21.58■■□□□ 1.04
Sdc3-201ENSMUST00000070478 Lamc3Q9R0B6 1581 aa21.57■■□□□ 1.04
Sdc3-201ENSMUST00000070478 Ccdc183A2AJB1 534 aa21.57■■□□□ 1.04
Sdc3-201ENSMUST00000070478 Bcl11aQ9QYE3 773 aa21.57■■□□□ 1.04
Sdc3-201ENSMUST00000070478 Ttll13A4Q9F6 804 aa21.56■■□□□ 1.04
Sdc3-201ENSMUST00000070478 BccipQ9CWI3 316 aa21.56■■□□□ 1.04
Sdc3-201ENSMUST00000070478 Chmp4cQ9D7F7 232 aa21.56■■□□□ 1.04
Sdc3-201ENSMUST00000070478 Cplx1P63040 134 aa21.56■■□□□ 1.04
Sdc3-201ENSMUST00000070478 GphnQ8BUV3 769 aaKnown RBP21.56■■□□□ 1.04
Sdc3-201ENSMUST00000070478 Smc3Q9CW03 1217 aaKnown RBP21.56■■□□□ 1.04
Sdc3-201ENSMUST00000070478 Mcm2P97310 904 aa21.55■■□□□ 1.04
Sdc3-201ENSMUST00000070478 Pcf11G3X9Z4 1553 aa21.55■■□□□ 1.04
Sdc3-201ENSMUST00000070478 PrxO55103 1391 aa21.54■■□□□ 1.04
Sdc3-201ENSMUST00000070478 TkfcQ8VC30 578 aa21.54■■□□□ 1.04
Sdc3-201ENSMUST00000070478 Gpatch11Q3UFS4 262 aa21.53■■□□□ 1.04
Sdc3-201ENSMUST00000070478 Larp1bA0A0A6YXJ7 370 aaKnown RBP21.53■■□□□ 1.04
Sdc3-201ENSMUST00000070478 Kri1Q8VDQ9 704 aaKnown RBP21.53■■□□□ 1.04
Sdc3-201ENSMUST00000070478 4933402E13RikQ9D4D2 429 aa21.53■■□□□ 1.04
Sdc3-201ENSMUST00000070478 Ccp110Q7TSH4 1004 aa21.52■■□□□ 1.04
Sdc3-201ENSMUST00000070478 Sall3Q62255 1320 aa21.52■■□□□ 1.04
Sdc3-201ENSMUST00000070478 Zkscan2G3X952 960 aa21.51■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Rrp12Q6P5B0 1295 aaKnown RBP21.51■■□□□ 1.03
Sdc3-201ENSMUST00000070478 PalmQ9Z0P4 383 aa21.51■■□□□ 1.03
Sdc3-201ENSMUST00000070478 IbtkQ6ZPR6 1352 aaKnown RBP21.51■■□□□ 1.03
Sdc3-201ENSMUST00000070478 VgfQ0VGU4 617 aa21.51■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Stk3Q9JI10 497 aa21.51■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Bicd2Q921C5 820 aa21.51■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Gnai2P08752 355 aaKnown RBP21.5■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Tpm3P21107 285 aaKnown RBP21.5■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Noc3lQ8VI84 807 aaKnown RBP21.5■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Fchsd2Q3USJ8 740 aa21.5■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Ppp2r3aB2RXC8 1150 aa21.49■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Ddrgk1Q80WW9 315 aa21.49■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Stard3nlQ9DCI3 235 aa21.49■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Ggnbp2Q5SV77 696 aa21.48■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Mlh3A0A1Y7VMP7 1443 aa21.48■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Kiaa0754Q69ZZ9 979 aa21.48■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Speer4bQ9D9F7 267 aa21.48■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Isy1Q69ZQ2 285 aaKnown RBP21.47■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Cchcr1Q8K2I2 770 aa21.47■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Nphp1Q9QY53 687 aa21.47■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Gm21680A0A0G2JGR8 267 aa21.47■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Polr3gQ6NXY9 223 aa21.47■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Becn1O88597 448 aa21.46■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Utp3Q9JI13 469 aaKnown RBP21.46■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Plekhd1B2RPU2 505 aa21.46■■□□□ 1.03
Sdc3-201ENSMUST00000070478 Caskin1Q6P9K8 1431 aa21.45■■□□□ 1.02
Sdc3-201ENSMUST00000070478 Trim30aP15533 496 aa21.45■■□□□ 1.02
Sdc3-201ENSMUST00000070478 Rec8Q8C5S7 591 aa21.45■■□□□ 1.02
Sdc3-201ENSMUST00000070478 Rbm5Q91YE7 815 aaKnown RBP21.45■■□□□ 1.02
Sdc3-201ENSMUST00000070478 Cdc37l1Q9CZP7 335 aa21.45■■□□□ 1.02
Sdc3-201ENSMUST00000070478 FosbP13346 338 aa21.45■■□□□ 1.02
Sdc3-201ENSMUST00000070478 UvssaQ9D479 717 aa21.45■■□□□ 1.02
Sdc3-201ENSMUST00000070478 Gm21663A0A0G2JE01 267 aa21.44■■□□□ 1.02
Sdc3-201ENSMUST00000070478 Gm7361D3Z6R1 267 aa21.44■■□□□ 1.02
Sdc3-201ENSMUST00000070478 5031410I06RikE9Q4E0 267 aa21.44■■□□□ 1.02
Sdc3-201ENSMUST00000070478 Gm1979E9QAN3 267 aa21.44■■□□□ 1.02
Sdc3-201ENSMUST00000070478 Gm5862K7N5V5 267 aa21.44■■□□□ 1.02
Sdc3-201ENSMUST00000070478 Gm10220K7N660 267 aa21.44■■□□□ 1.02
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms