RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 InaP46660 501 aa10.92□□□□□ -0.66
Clcn3-202ENSMUST00000056508 Gm9758Q80ZT2 255 aa10.92□□□□□ -0.66
Clcn3-202ENSMUST00000056508 Dydc1Q9D9T0 175 aa10.92□□□□□ -0.66
Clcn3-202ENSMUST00000056508 A0A1W2P6Q8 802 aa10.92□□□□□ -0.66
Clcn3-202ENSMUST00000056508 Gm9048A0A1W2P7H4 802 aa10.92□□□□□ -0.66
Clcn3-202ENSMUST00000056508 A0A1W2P7Z8 802 aa10.92□□□□□ -0.66
Clcn3-202ENSMUST00000056508 Gm9046A0A1W2P855 802 aa10.92□□□□□ -0.66
Clcn3-202ENSMUST00000056508 Ric3Q8BPM6 367 aa10.92□□□□□ -0.66
Clcn3-202ENSMUST00000056508 Ccdc34Q3UI66 367 aa10.91□□□□□ -0.66
Clcn3-202ENSMUST00000056508 Pdcl3Q8BVF2 240 aa10.91□□□□□ -0.66
Clcn3-202ENSMUST00000056508 Sept7O55131 436 aa10.91□□□□□ -0.66
Clcn3-202ENSMUST00000056508 Ercc3P49135 783 aa10.91□□□□□ -0.66
Clcn3-202ENSMUST00000056508 Ppfia1B2RXQ2 1266 aa10.91□□□□□ -0.66
Clcn3-202ENSMUST00000056508 Tax1bp1Q3UKC1 814 aaKnown RBP10.9□□□□□ -0.66
Clcn3-202ENSMUST00000056508 Rrp7aQ9D1C9 280 aaKnown RBP10.9□□□□□ -0.66
Clcn3-202ENSMUST00000056508 Ddx23D3Z0M9 819 aaKnown RBP10.9□□□□□ -0.66
Clcn3-202ENSMUST00000056508 Pax3P24610 479 aa10.89□□□□□ -0.67
Clcn3-202ENSMUST00000056508 IqceQ6PCQ0 778 aa10.89□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Psmd6Q99JI4 389 aa10.89□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Noa1Q9JJG9 693 aaKnown RBP10.89□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Plekhd1B2RPU2 505 aa10.89□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Gpbp1l1Q6NZP2 473 aa10.89□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Triml1Q8BVP1 470 aa10.89□□□□□ -0.67
Clcn3-202ENSMUST00000056508 RydenQ8CAK3 290 aaKnown RBP10.89□□□□□ -0.67
Clcn3-202ENSMUST00000056508 SowahcQ8C0J6 512 aa10.89□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Strn4P58404 760 aa10.88□□□□□ -0.67
Clcn3-202ENSMUST00000056508 RbsnQ80Y56 783 aa10.88□□□□□ -0.67
Clcn3-202ENSMUST00000056508 CalcaP70160 136 aa10.88□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Cep63Q3UPP8 700 aa10.88□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Dph6Q9CQ28 267 aa10.88□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Gm21680A0A0G2JGR8 267 aa10.88□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Gm1979E9QAN3 267 aa10.88□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Gipc2Q9Z2H7 314 aa10.88□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Taf3Q5HZG4 932 aa10.87□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Fbxo2Q80UW2 297 aa10.87□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Nfxl1E9Q8I7 918 aaKnown RBP10.87□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Kif22Q3V300 660 aa10.87□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Arih1Q9Z1K5 555 aa10.87□□□□□ -0.67
Clcn3-202ENSMUST00000056508 SlkO54988 1233 aa10.87□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Vps37dQ810I0 261 aa10.87□□□□□ -0.67
Clcn3-202ENSMUST00000056508 GlyctkQ8QZY2 523 aa10.87□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Speer4f2E9Q366 295 aa10.86□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Nob1Q8BW10 403 aa10.86□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Ush1cQ9ES64 910 aa10.86□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Nucb1Q02819 459 aaKnown RBP10.86□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Plekhg5Q66T02 1073 aa10.86□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Hoxa2P31245 372 aa10.86□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Mapk1P63085 358 aa10.85□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Ddrgk1Q80WW9 315 aa10.85□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Snd1Q78PY7 910 aaKnown RBP10.85□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Trim30aP15533 496 aa10.84□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Atf3Q60765 181 aa10.84□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Cdc5lQ6A068 802 aaKnown RBP10.84□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Kctd17E0CYQ0 296 aa10.84□□□□□ -0.67
Clcn3-202ENSMUST00000056508 A0A1L1SQF0 893 aa10.84□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Ccdc181Q80ZU5 509 aa10.84□□□□□ -0.67
Clcn3-202ENSMUST00000056508 MicalclQ9D5U9 680 aa10.84□□□□□ -0.67
Clcn3-202ENSMUST00000056508 Cep120Q7TSG1 988 aa10.83□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Evc2Q8K1G2 1220 aa10.83□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Ddx27Q921N6 760 aaKnown RBP10.83□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Art2aP17981 287 aa10.83□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Vmp1Q99KU0 406 aa10.83□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Ccar2Q8VDP4 922 aaKnown RBP10.83□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Rrm1P07742 792 aa10.82□□□□□ -0.68
Clcn3-202ENSMUST00000056508 TbceQ8CIV8 524 aa10.82□□□□□ -0.68
Clcn3-202ENSMUST00000056508 AticQ9CWJ9 592 aaKnown RBP10.82□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Puf60Q3UEB3 564 aaKnown RBP10.82□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Ano8Q6PB70 1060 aa10.82□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Ccdc47Q9D024 483 aaKnown RBP10.82□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Pnma1Q8C1C8 353 aa10.82□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Ccdc70Q9D9B0 223 aa10.82□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Gm21190A0A0G2JGJ6 266 aa10.82□□□□□ -0.68
Clcn3-202ENSMUST00000056508 U2af1Q9D883 239 aaKnown RBP10.82□□□□□ -0.68
Clcn3-202ENSMUST00000056508 NcapgE9PWG6 1004 aa10.81□□□□□ -0.68
Clcn3-202ENSMUST00000056508 EnahQ03173 802 aa10.81□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Mpp4Q6P7F1 635 aa10.81□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Msl1Q6PDM1 616 aa10.81□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Arid3cA6PWV5 409 aa10.81□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Sema3fO88632 785 aa10.81□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Kif5cP28738 956 aaKnown RBP10.81□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Ipo8Q7TMY7 1010 aa10.81□□□□□ -0.68
Clcn3-202ENSMUST00000056508 IncenpQ9WU62 880 aa10.81□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Cwc22Q8C5N3 908 aaKnown RBP10.81□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Lmbrd2Q8C561 694 aa10.8□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Ipo9Q91YE6 1041 aa10.8□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Usp5P56399 858 aaKnown RBP10.8□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Gimap6Q8K349 305 aa10.8□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Prc1Q99K43 603 aaKnown RBP10.8□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Irf9Q61179 399 aa10.8□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Filip1Q9CS72 1211 aa10.8□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Rec8Q8C5S7 591 aa10.79□□□□□ -0.68
Clcn3-202ENSMUST00000056508 UncxO08934 530 aa10.79□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Bms1Q6PGF5 1284 aaKnown RBP10.79□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Ncoa4Q5U4H9 625 aa10.79□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Adam7O35227 789 aa10.78□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Gimap8Q75N62 688 aa10.78□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Ccdc43Q9CR29 222 aaKnown RBP10.78□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Pkd2O35245 966 aa10.78□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Calr4Q3TQS0 420 aa10.78□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Ccdc174Q3U155 467 aa10.78□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms