RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 EzrP26040 586 aaKnown RBP22.39■■□□□ 1.18
Ebf3-201ENSMUST00000033378 Usp48Q3V0C5 1052 aa22.38■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Rnf20Q5DTM8 973 aa22.38■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Znf692Q3U381 531 aa22.37■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Kif3aP28741 701 aa22.37■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Grin2bQ01097 1482 aa22.37■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Smc5Q8CG46 1101 aaKnown RBP22.37■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Ddx11Q6AXC6 880 aa22.37■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Sv2bQ8BG39 683 aa22.37■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Map3k5O35099 1380 aa22.37■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Fez1Q8K0X8 392 aa22.36■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Hmgn5Q9JL35 406 aa22.36■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Atp2b2Q9R0K7 1198 aa22.36■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Drc7Q6V3W6 876 aa22.35■■□□□ 1.17
Ebf3-201ENSMUST00000033378 BccipQ9CWI3 316 aa22.35■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Gm7298A0A0N4SVU1 1476 aa22.35■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Il16O54824 1322 aa22.35■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Zkscan2G3X952 960 aa22.34■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Ubap1lG3UW59 384 aa22.34■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Arhgap31A6X8Z5 1425 aa22.34■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Ncoa1P70365 1447 aa22.34■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Gm21190A0A0G2JGJ6 266 aa22.34■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Fam13bQ8K2H3 851 aa22.33■■□□□ 1.17
Ebf3-201ENSMUST00000033378 SetQ9EQU5 289 aaKnown RBP22.33■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Cfdp1O88271 295 aaKnown RBP22.33■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Ints3Q7TPD0 1041 aaKnown RBP22.33■■□□□ 1.17
Ebf3-201ENSMUST00000033378 Soga1E1U8D0 1418 aa22.32■■□□□ 1.16
Ebf3-201ENSMUST00000033378 TchhA0A0B4J1F9 1599 aa22.32■■□□□ 1.16
Ebf3-201ENSMUST00000033378 Srek1Q8BZX4 494 aaKnown RBP22.31■■□□□ 1.16
Ebf3-201ENSMUST00000033378 Cchcr1Q8K2I2 770 aa22.31■■□□□ 1.16
Ebf3-201ENSMUST00000033378 Erc2Q6PH08 957 aa22.31■■□□□ 1.16
Ebf3-201ENSMUST00000033378 Rab11fip3Q8CHD8 1047 aa22.31■■□□□ 1.16
Ebf3-201ENSMUST00000033378 FosbP13346 338 aa22.31■■□□□ 1.16
Ebf3-201ENSMUST00000033378 Babam1Q3UI43 333 aa22.31■■□□□ 1.16
Ebf3-201ENSMUST00000033378 Tfip11Q9ERA6 838 aaKnown RBP22.31■■□□□ 1.16
Ebf3-201ENSMUST00000033378 Naip5Q9R016 1403 aa22.3■■□□□ 1.16
Ebf3-201ENSMUST00000033378 Gcc1Q9D4H2 778 aa22.3■■□□□ 1.16
Ebf3-201ENSMUST00000033378 Stk3Q9JI10 497 aa22.3■■□□□ 1.16
Ebf3-201ENSMUST00000033378 Gabpb2P81069 414 aa22.29■■□□□ 1.16
Ebf3-201ENSMUST00000033378 Cplx2P84086 134 aa22.29■■□□□ 1.16
Ebf3-201ENSMUST00000033378 Ccdc47Q9D024 483 aaKnown RBP22.29■■□□□ 1.16
Ebf3-201ENSMUST00000033378 Hnrnpul1Q8VDM6 859 aaKnown RBP22.29■■□□□ 1.16
Ebf3-201ENSMUST00000033378 Q9D9H8 365 aa22.29■■□□□ 1.16
Ebf3-201ENSMUST00000033378 AnlnQ8K298 1121 aaKnown RBP22.28■■□□□ 1.16
Ebf3-201ENSMUST00000033378 Pnmal2G3X9N3 661 aa22.28■■□□□ 1.16
Ebf3-201ENSMUST00000033378 Neurod6P48986 337 aa22.28■■□□□ 1.16
Ebf3-201ENSMUST00000033378 Olfml1Q8BSH2 233 aa22.28■■□□□ 1.16
Ebf3-201ENSMUST00000033378 Mcm4P49717 862 aa22.27■■□□□ 1.16
Ebf3-201ENSMUST00000033378 Dnai2A2AC93 623 aa22.27■■□□□ 1.16
Ebf3-201ENSMUST00000033378 Ppp1r9bQ6R891 817 aaKnown RBP22.27■■□□□ 1.15
Ebf3-201ENSMUST00000033378 A2mQ6GQT1 1474 aa22.26■■□□□ 1.15
Ebf3-201ENSMUST00000033378 Cplx1P63040 134 aa22.26■■□□□ 1.15
Ebf3-201ENSMUST00000033378 Hook1Q8BIL5 728 aa22.26■■□□□ 1.15
Ebf3-201ENSMUST00000033378 Rec8Q8C5S7 591 aa22.26■■□□□ 1.15
Ebf3-201ENSMUST00000033378 FanciQ8K368 1330 aa22.26■■□□□ 1.15
Ebf3-201ENSMUST00000033378 Kif20aP97329 887 aa22.26■■□□□ 1.15
Ebf3-201ENSMUST00000033378 Top2bQ64511 1612 aa22.26■■□□□ 1.15
Ebf3-201ENSMUST00000033378 Tpm1P58771 284 aa22.25■■□□□ 1.15
Ebf3-201ENSMUST00000033378 Maco1Q7TQE6 664 aaKnown RBP22.25■■□□□ 1.15
Ebf3-201ENSMUST00000033378 Gpatch3Q8BIY1 525 aa22.25■■□□□ 1.15
Ebf3-201ENSMUST00000033378 PogzQ8BZH4 1409 aaKnown RBP22.25■■□□□ 1.15
Ebf3-201ENSMUST00000033378 Smc4Q8CG47 1286 aa22.24■■□□□ 1.15
Ebf3-201ENSMUST00000033378 Fmnl2A2APV2 1086 aa22.24■■□□□ 1.15
Ebf3-201ENSMUST00000033378 Gm21969J3QJZ1 289 aa22.24■■□□□ 1.15
Ebf3-201ENSMUST00000033378 PdcQ9QW08 244 aa22.24■■□□□ 1.15
Ebf3-201ENSMUST00000033378 AqrQ8CFQ3 1481 aaKnown RBP22.23■■□□□ 1.15
Ebf3-201ENSMUST00000033378 PhaxQ9JJT9 385 aaKnown RBP22.23■■□□□ 1.15
Ebf3-201ENSMUST00000033378 HdgfP51859 237 aaKnown RBP22.23■■□□□ 1.15
Ebf3-201ENSMUST00000033378 Q8C5K5 320 aa22.23■■□□□ 1.15
Ebf3-201ENSMUST00000033378 Fam163aQ8CAA5 168 aa22.23■■□□□ 1.15
Ebf3-201ENSMUST00000033378 Kank1E9Q238 1360 aa22.23■■□□□ 1.15
Ebf3-201ENSMUST00000033378 NexnQ7TPW1 607 aa22.23■■□□□ 1.15
Ebf3-201ENSMUST00000033378 Ubxn4Q8VCH8 506 aa22.23■■□□□ 1.15
Ebf3-201ENSMUST00000033378 NaspQ99MD9 773 aaKnown RBP22.23■■□□□ 1.15
Ebf3-201ENSMUST00000033378 CarsQ9ER72 831 aaKnown RBP22.22■■□□□ 1.15
Ebf3-201ENSMUST00000033378 Nphp1Q9QY53 687 aa22.22■■□□□ 1.15
Ebf3-201ENSMUST00000033378 Jakmip1Q8BVL9 626 aa22.22■■□□□ 1.15
Ebf3-201ENSMUST00000033378 CadpsQ80TJ1 1355 aa22.21■■□□□ 1.15
Ebf3-201ENSMUST00000033378 Pdia4P08003 638 aaKnown RBP22.21■■□□□ 1.15
Ebf3-201ENSMUST00000033378 Atxn3Q9CVD2 355 aa22.2■■□□□ 1.15
Ebf3-201ENSMUST00000033378 Gnai2P08752 355 aaKnown RBP22.2■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Cdkn1cP49919 348 aa22.19■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Ppip5k2Q6ZQB6 1129 aa22.19■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Psma5Q9Z2U1 241 aaKnown RBP22.19■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Evc2Q8K1G2 1220 aa22.19■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Q9D9S1 216 aa22.18■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Cabp2Q9JLK4 216 aa22.18■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Bcl2l13P59017 434 aa22.18■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Abcc5Q9R1X5 1436 aa22.18■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Arhgap5P97393 1501 aa22.18■■□□□ 1.14
Ebf3-201ENSMUST00000033378 MpripP97434 1024 aa22.18■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Pcf11G3X9Z4 1553 aa22.17■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Anp32eP97822 260 aaKnown RBP22.17■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Ccdc34Q3UI66 367 aa22.17■■□□□ 1.14
Ebf3-201ENSMUST00000033378 EprsQ8CGC7 1512 aaKnown RBP22.17■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Mphosph10Q810V0 681 aaKnown RBP22.17■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Chmp7Q8R1T1 451 aa22.17■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Syce3B5KM66 88 aa22.16■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Q8BT18 775 aa22.16■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Cdc37l1Q9CZP7 335 aa22.15■■□□□ 1.14
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms