RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 Nek4Q9Z1J2 792 aa14.93□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Hmgn5Q9JL35 406 aa14.93□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Zkscan2G3X952 960 aa14.92□□□□□ -0.02
Ldb3-201ENSMUST00000022327 SetQ9EQU5 289 aaKnown RBP14.92□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Q8C5K5 320 aa14.92□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Bicd2Q921C5 820 aa14.92□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Mrc2Q64449 1479 aa14.92□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Nectin2P32507 530 aa14.91□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Tpm2P58774 284 aa14.91□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Cfdp1O88271 295 aaKnown RBP14.91□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Hmox1P14901 289 aa14.91□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Ints3Q7TPD0 1041 aaKnown RBP14.91□□□□□ -0.02
Ldb3-201ENSMUST00000022327 NexnQ7TPW1 607 aa14.91□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Naip2Q9QUK4 1447 aa14.9□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Ipo7Q9EPL8 1038 aaKnown RBP14.9□□□□□ -0.02
Ldb3-201ENSMUST00000022327 HypkQ9CR41 129 aa14.9□□□□□ -0.02
Ldb3-201ENSMUST00000022327 TatQ8QZR1 454 aa14.9□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Gcc1Q9D4H2 778 aa14.9□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Gm14025A2AP89 1413 aa14.9□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Cplx1P63040 134 aa14.9□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Psma5Q9Z2U1 241 aaKnown RBP14.9□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Map7d2A2AG50 781 aa14.89□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Hook1Q8BIL5 728 aa14.89□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Tpm4Q6IRU2 248 aa14.88□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Rec8Q8C5S7 591 aa14.88□□□□□ -0.03
Ldb3-201ENSMUST00000022327 EzrP26040 586 aaKnown RBP14.88□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Fchsd2Q3USJ8 740 aa14.88□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Isy1Q69ZQ2 285 aaKnown RBP14.88□□□□□ -0.03
Ldb3-201ENSMUST00000022327 AnlnQ8K298 1121 aaKnown RBP14.88□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Gabpb2P81069 414 aa14.87□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Slc52a2Q9D8F3 450 aa14.87□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Gnl3lQ6PGG6 577 aaKnown RBP14.87□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Nutm1Q8BHP2 1126 aa14.87□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Camsap1A2AHC3 1581 aa14.87□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Gpatch3Q8BIY1 525 aa14.86□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Asxl1P59598 1514 aa14.86□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Apaf1O88879 1249 aa14.86□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Neurod6P48986 337 aa14.86□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Rfx7F8VPJ6 1459 aa14.86□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Hap1O35668 628 aa14.85□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Ubxn4Q8VCH8 506 aa14.85□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Tnpo1Q8BFY9 898 aaKnown RBP14.85□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Mug1P28665 1476 aa14.84□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Gnai2P08752 355 aaKnown RBP14.84□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Taf3Q5HZG4 932 aa14.84□□□□□ -0.03
Ldb3-201ENSMUST00000022327 PsapQ61207 557 aaKnown RBP14.84□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Krt82Q99M74 516 aa14.84□□□□□ -0.03
Ldb3-201ENSMUST00000022327 CrcpO35427 148 aa14.84□□□□□ -0.03
Ldb3-201ENSMUST00000022327 PogkQ80TC5 607 aa14.84□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Dusp27Q148W8 1138 aa14.83□□□□□ -0.03
Ldb3-201ENSMUST00000022327 Cfap99A0A140LIX9 648 aa14.83□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Zkscan1Q8BGS3 561 aaKnown RBP14.83□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Mical1Q8VDP3 1048 aa14.83□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Kri1Q8VDQ9 704 aaKnown RBP14.83□□□□□ -0.04
Ldb3-201ENSMUST00000022327 DroshaQ5HZJ0 1373 aaKnown RBP14.83□□□□□ -0.04
Ldb3-201ENSMUST00000022327 IbtkQ6ZPR6 1352 aaKnown RBP14.83□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Polr3gQ6NXY9 223 aa14.82□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Mphosph10Q810V0 681 aaKnown RBP14.82□□□□□ -0.04
Ldb3-201ENSMUST00000022327 PrxO55103 1391 aa14.82□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Nphp1Q9QY53 687 aa14.82□□□□□ -0.04
Ldb3-201ENSMUST00000022327 PdcQ9QW08 244 aa14.82□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Tubb6Q922F4 447 aa14.81□□□□□ -0.04
Ldb3-201ENSMUST00000022327 NaspQ99MD9 773 aaKnown RBP14.81□□□□□ -0.04
Ldb3-201ENSMUST00000022327 BccipQ9CWI3 316 aa14.81□□□□□ -0.04
Ldb3-201ENSMUST00000022327 NexmifQ5DTT1 1515 aa14.81□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Pcf11G3X9Z4 1553 aa14.81□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Ccdc34Q3UI66 367 aa14.81□□□□□ -0.04
Ldb3-201ENSMUST00000022327 SynmQ70IV5 1561 aa14.81□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Mad1l1Q9WTX8 717 aaKnown RBP14.81□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Cdk19Q8BWD8 501 aa14.8□□□□□ -0.04
Ldb3-201ENSMUST00000022327 TchhA0A0B4J1F9 1599 aa14.8□□□□□ -0.04
Ldb3-201ENSMUST00000022327 OptnQ8K3K8 584 aa14.8□□□□□ -0.04
Ldb3-201ENSMUST00000022327 UvssaQ9D479 717 aa14.8□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Abcc5Q9R1X5 1436 aa14.8□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Magi1Q6RHR9 1471 aa14.8□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Dhx16G3X8X0 1044 aaKnown RBP14.79□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Pdcl3Q8BVF2 240 aa14.79□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Eif3aP23116 1344 aaKnown RBP14.79□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Gm10471E9Q1C7 252 aa14.79□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Atf3Q60765 181 aa14.79□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Plb1Q3TTY0 1478 aa14.79□□□□□ -0.04
Ldb3-201ENSMUST00000022327 TefQ9JLC6 301 aa14.79□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Caskin1Q6P9K8 1431 aa14.78□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Map4k4P97820 1233 aaKnown RBP14.78□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Gimap6Q8K349 305 aa14.78□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Polr3aB2RXC6 1390 aa14.78□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Igf1rQ60751 1373 aa14.78□□□□□ -0.04
Ldb3-201ENSMUST00000022327 A2mQ6GQT1 1474 aa14.78□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Trim29Q8R2Q0 587 aa14.78□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Mlh3A0A1Y7VMP7 1443 aa14.78□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Sos1Q62245 1319 aa14.78□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Fmnl2A2APV2 1086 aa14.78□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Zpr1Q62384 459 aa14.78□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Kif18aQ91WD7 886 aa14.78□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Lamc3Q9R0B6 1581 aa14.77□□□□□ -0.04
Ldb3-201ENSMUST00000022327 MpripP97434 1024 aa14.77□□□□□ -0.04
Ldb3-201ENSMUST00000022327 Wdr62Q3U3T8 1523 aa14.77□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Me1P06801 572 aa14.77□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Vps53Q8CCB4 832 aa14.77□□□□□ -0.05
Ldb3-201ENSMUST00000022327 Q9D9S1 216 aa14.77□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 57 ms