RNA–Protein interactions for RNA: ENSMUST00000021046.5

Ddx42-201, Transcript of ATP-dependent RNA helicase DDX42, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx42, Length 4,011 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42-201ENSMUST00000021046 ScaperF8VQ70 1398 aaKnown RBP16.6■□□□□ 0.25
Ddx42-201ENSMUST00000021046 Gm45140A0A0N4SUM8 220 aa16.6■□□□□ 0.25
Ddx42-201ENSMUST00000021046 Irx4Q9QY61 515 aa16.6■□□□□ 0.25
Ddx42-201ENSMUST00000021046 1700019A02RikA0A087WPV9 146 aa16.59■□□□□ 0.25
Ddx42-201ENSMUST00000021046 CebpzP53569 1052 aaKnown RBP16.59■□□□□ 0.25
Ddx42-201ENSMUST00000021046 Znf526Q8BI66 675 aa16.59■□□□□ 0.25
Ddx42-201ENSMUST00000021046 Rbm42Q91V81 474 aaKnown RBP16.59■□□□□ 0.25
Ddx42-201ENSMUST00000021046 Dnajc2P54103 621 aaKnown RBP16.59■□□□□ 0.25
Ddx42-201ENSMUST00000021046 Kif7B7ZNG0 1348 aa16.59■□□□□ 0.25
Ddx42-201ENSMUST00000021046 Phlpp2Q8BXA7 1320 aa16.59■□□□□ 0.25
Ddx42-201ENSMUST00000021046 Top2aQ01320 1528 aaKnown RBP16.58■□□□□ 0.25
Ddx42-201ENSMUST00000021046 Srpk2O54781 681 aaKnown RBP16.58■□□□□ 0.25
Ddx42-201ENSMUST00000021046 Zmynd15Q8C0R7 736 aa16.58■□□□□ 0.25
Ddx42-201ENSMUST00000021046 Dmrtc1Q9D9R7 182 aa16.58■□□□□ 0.25
Ddx42-201ENSMUST00000021046 Camsap2Q8C1B1 1461 aa16.58■□□□□ 0.25
Ddx42-201ENSMUST00000021046 Gm20521D3Z5F7 333 aa16.58■□□□□ 0.24
Ddx42-201ENSMUST00000021046 SetQ9EQU5 289 aaKnown RBP16.58■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Clstn2Q9ER65 966 aa16.58■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Sytl4Q9R0Q1 673 aa16.58■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Rlbp1Q9Z275 317 aa16.58■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Gadd45bP22339 160 aa16.58■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Drc7Q6V3W6 876 aa16.58■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Nop14Q8R3N1 860 aaKnown RBP16.57■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Fam184aE9PW83 1143 aa16.57■□□□□ 0.24
Ddx42-201ENSMUST00000021046 LrpprcQ6PB66 1392 aaKnown RBP16.57■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Tmx1Q8VBT0 278 aa16.56■□□□□ 0.24
Ddx42-201ENSMUST00000021046 CenpqQ9CPQ5 267 aa16.56■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Eif4g2Q62448 906 aaKnown RBP16.56■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Otud6bQ8K2H2 294 aa16.56■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Sh3bgrQ9WUZ7 214 aa16.56■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Fam184bQ0KK56 942 aa16.56■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Zrsr2Q62377 462 aaKnown RBP16.56■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Anp32cQ64G17 123 aa16.56■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Mcm3P25206 812 aaKnown RBP16.55■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Samm50Q8BGH2 469 aa16.55■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Mmel1Q9JLI3 765 aa16.55■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Srcin1Q9QWI6 1250 aa16.55■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Kdm5bQ80Y84 1544 aa16.55■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Q9D2X8 372 aa16.55■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Cc2d2aQ8CFW7 1633 aa16.55■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Tiam1Q60610 1591 aa16.55■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Nucb2P81117 420 aa16.54■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Aplp1Q03157 653 aa16.54■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Cux2P70298 1426 aa16.54■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Mns1Q61884 491 aa16.54■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Crybg2B7ZCC2 1516 aa16.54■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Trap1aP19473 224 aa16.53■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Kdm4aQ8BW72 1064 aa16.53■□□□□ 0.24
Ddx42-201ENSMUST00000021046 4930548H24RikQ9D496 437 aa16.53■□□□□ 0.24
Ddx42-201ENSMUST00000021046 CalrP14211 416 aaKnown RBP16.53■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Brpf1B2RRD7 1212 aa16.52■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Gm10093D3YYI8 482 aa16.52■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Hdac1O09106 482 aaKnown RBP16.52■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Tpm1P58771 284 aa16.52■□□□□ 0.24
Ddx42-201ENSMUST00000021046 G3bp1P97855 465 aaKnown RBP16.52■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Fam177a1Q8BR63 207 aa16.52■□□□□ 0.24
Ddx42-201ENSMUST00000021046 IqubQ8CDK3 788 aa16.52■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Rassf4Q8CB96 322 aa16.52■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Iqca1Q9CUL5 857 aa16.52■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Mad1l1Q9WTX8 717 aaKnown RBP16.52■□□□□ 0.24
Ddx42-201ENSMUST00000021046 AqrQ8CFQ3 1481 aaKnown RBP16.52■□□□□ 0.24
Ddx42-201ENSMUST00000021046 Smarce1O54941 411 aaKnown RBP16.51■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Cetn4Q8K4K1 168 aa16.51■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Nxf2Q4ZGD8 691 aa16.51■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Igsf3Q6ZQA6 1194 aa16.51■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Cchcr1Q8K2I2 770 aa16.51■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Spag5Q7TME2 1165 aa16.51■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Atxn3Q9CVD2 355 aa16.51■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Cgnl1Q6AW69 1298 aa16.5■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Hmgn5Q9JL35 406 aa16.5■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Ppip5k2Q6ZQB6 1129 aa16.5■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Def6Q8C2K1 630 aa16.5■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Mkrn3Q60764 544 aa16.49■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Bach2P97303 839 aa16.49■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Mctp2Q5RJH2 878 aa16.49■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Atp1b4Q99ME6 356 aa16.49■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Dhx9O70133 1380 aaKnown RBP16.48■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Naip2Q9QUK4 1447 aa16.48■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Kif2aP28740 705 aa16.48■□□□□ 0.23
Ddx42-201ENSMUST00000021046 NexnQ7TPW1 607 aa16.48■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Irx2P81066 474 aa16.48■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Kif15Q6P9L6 1387 aa16.48■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Tbc1d9Q3UYK3 1264 aa16.48■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Nap1l3Q794H2 544 aa16.48■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Zfp397Q7TNK4 527 aa16.48■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Apaf1O88879 1249 aa16.47■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Ranbp1P34022 203 aaKnown RBP16.47■□□□□ 0.23
Ddx42-201ENSMUST00000021046 GsdmaQ9EST1 446 aa16.47■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Zkscan5Q9Z1D8 819 aa16.47■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Sox12Q04890 314 aa16.47■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Zpr1Q62384 459 aa16.47■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Chaf1aQ9QWF0 911 aa16.47■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Gm42641I6L9G2 585 aa16.47■□□□□ 0.23
Ddx42-201ENSMUST00000021046 AtripQ8BMG1 785 aa16.47■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Usp48Q3V0C5 1052 aa16.46■□□□□ 0.23
Ddx42-201ENSMUST00000021046 3425401B19RikD3Z1D3 1412 aa16.46■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Ncbp1Q3UYV9 790 aaKnown RBP16.46■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Tsen2Q6P7W5 460 aa16.46■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Rbm33Q9CXK9 1231 aaKnown RBP16.46■□□□□ 0.23
Ddx42-201ENSMUST00000021046 Rab3gap2Q8BMG7 1366 aa16.46■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 68.1 ms