RNA–Protein interactions for RNA: ENSMUST00000020270.5

Ddx50-201, Transcript of ATP-dependent RNA helicase DDX50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx50, Length 2,535 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx50-201ENSMUST00000020270 Abca6Q8K441 1624 aa20.81■□□□□ 0.92
Ddx50-201ENSMUST00000020270 Arid4bA2CG63 1314 aaKnown RBP20.81■□□□□ 0.92
Ddx50-201ENSMUST00000020270 Golga2Q921M4 999 aa20.8■□□□□ 0.92
Ddx50-201ENSMUST00000020270 Myom1Q62234 1667 aaKnown RBP20.8■□□□□ 0.92
Ddx50-201ENSMUST00000020270 Smc5Q8CG46 1101 aaKnown RBP20.8■□□□□ 0.92
Ddx50-201ENSMUST00000020270 Srpk2O54781 681 aaKnown RBP20.79■□□□□ 0.92
Ddx50-201ENSMUST00000020270 Mbd3Q9Z2D8 285 aaKnown RBP20.79■□□□□ 0.92
Ddx50-201ENSMUST00000020270 Atf7ipQ7TT18 1306 aa20.79■□□□□ 0.92
Ddx50-201ENSMUST00000020270 P2rx7Q9Z1M0 595 aa20.78■□□□□ 0.92
Ddx50-201ENSMUST00000020270 Cdk5rap2Q8K389 1822 aa20.77■□□□□ 0.92
Ddx50-201ENSMUST00000020270 Dnai1Q8C0M8 701 aa20.77■□□□□ 0.92
Ddx50-201ENSMUST00000020270 Cul9Q80TT8 1865 aa20.76■□□□□ 0.91
Ddx50-201ENSMUST00000020270 Ttc21bQ0HA38 1315 aa20.76■□□□□ 0.91
Ddx50-201ENSMUST00000020270 Znf518aB2RRF6 1478 aaKnown RBP20.75■□□□□ 0.91
Ddx50-201ENSMUST00000020270 Ak7Q9D2H2 614 aa20.75■□□□□ 0.91
Ddx50-201ENSMUST00000020270 Rlbp1Q9Z275 317 aa20.75■□□□□ 0.91
Ddx50-201ENSMUST00000020270 ErbinQ80TH2 1402 aa20.75■□□□□ 0.91
Ddx50-201ENSMUST00000020270 Gtf3c3Q3TMP1 882 aa20.74■□□□□ 0.91
Ddx50-201ENSMUST00000020270 Rangap1P46061 589 aaKnown RBP20.74■□□□□ 0.91
Ddx50-201ENSMUST00000020270 Qser1A2BIE1 1698 aa20.74■□□□□ 0.91
Ddx50-201ENSMUST00000020270 Gli2Q0VGT2 1544 aa20.73■□□□□ 0.91
Ddx50-201ENSMUST00000020270 Ylpm1Q9R0I7 1386 aaKnown RBP20.73■□□□□ 0.91
Ddx50-201ENSMUST00000020270 Iqgap3F8VQ29 1632 aa20.72■□□□□ 0.91
Ddx50-201ENSMUST00000020270 Zranb1Q7M760 708 aa20.71■□□□□ 0.91
Ddx50-201ENSMUST00000020270 Cfap65Q3V0B4 1847 aa20.71■□□□□ 0.91
Ddx50-201ENSMUST00000020270 Uspl1Q3ULM6 1089 aa20.7■□□□□ 0.9
Ddx50-201ENSMUST00000020270 Cep152A2AUM9 1736 aaKnown RBP20.7■□□□□ 0.9
Ddx50-201ENSMUST00000020270 Pnmal2G3X9N3 661 aa20.7■□□□□ 0.9
Ddx50-201ENSMUST00000020270 Plcd4Q8K3R3 807 aa20.69■□□□□ 0.9
Ddx50-201ENSMUST00000020270 NpatQ8BMA5 1420 aa20.69■□□□□ 0.9
Ddx50-201ENSMUST00000020270 AatkQ80YE4 1365 aa20.69■□□□□ 0.9
Ddx50-201ENSMUST00000020270 AnkarA2RT91 1465 aa20.69■□□□□ 0.9
Ddx50-201ENSMUST00000020270 Cdc42bpgQ80UW5 1551 aa20.69■□□□□ 0.9
Ddx50-201ENSMUST00000020270 Duxf3A0A0N4SV92 674 aa20.68■□□□□ 0.9
Ddx50-201ENSMUST00000020270 Hsp90ab1P11499 724 aaKnown RBP20.68■□□□□ 0.9
Ddx50-201ENSMUST00000020270 Irx3P81067 507 aa20.68■□□□□ 0.9
Ddx50-201ENSMUST00000020270 Puf60Q3UEB3 564 aaKnown RBP20.68■□□□□ 0.9
Ddx50-201ENSMUST00000020270 Apaf1O88879 1249 aa20.68■□□□□ 0.9
Ddx50-201ENSMUST00000020270 Afap1Q80YS6 731 aa20.68■□□□□ 0.9
Ddx50-201ENSMUST00000020270 Ppp1r3fQ9JIG4 799 aa20.68■□□□□ 0.9
Ddx50-201ENSMUST00000020270 Prex1Q69ZK0 1650 aa20.66■□□□□ 0.9
Ddx50-201ENSMUST00000020270 Abca8aQ8K442 1620 aa20.65■□□□□ 0.9
Ddx50-201ENSMUST00000020270 Tmem131lQ3U3D7 1597 aa20.65■□□□□ 0.9
Ddx50-201ENSMUST00000020270 Ccdc183A2AJB1 534 aa20.64■□□□□ 0.9
Ddx50-201ENSMUST00000020270 Gm6268A2A3U9 297 aa20.64■□□□□ 0.89
Ddx50-201ENSMUST00000020270 Nphp4P59240 1425 aa20.63■□□□□ 0.89
Ddx50-201ENSMUST00000020270 Stag3O70576 1240 aa20.62■□□□□ 0.89
Ddx50-201ENSMUST00000020270 Ipo8Q7TMY7 1010 aa20.62■□□□□ 0.89
Ddx50-201ENSMUST00000020270 KarsQ99MN1 595 aaKnown RBP20.62■□□□□ 0.89
Ddx50-201ENSMUST00000020270 Rims1Q99NE5 1463 aa20.61■□□□□ 0.89
Ddx50-201ENSMUST00000020270 Topbp1Q6ZQF0 1515 aa20.61■□□□□ 0.89
Ddx50-201ENSMUST00000020270 Ehbp1l1Q99MS7 1716 aa20.61■□□□□ 0.89
Ddx50-201ENSMUST00000020270 Mre11Q61216 706 aa20.6■□□□□ 0.89
Ddx50-201ENSMUST00000020270 Mapk8ip3Q9ESN9 1337 aa20.6■□□□□ 0.89
Ddx50-201ENSMUST00000020270 Prdm2A2A7B5 1709 aaKnown RBP20.6■□□□□ 0.89
Ddx50-201ENSMUST00000020270 Talpid3E9PV87 1520 aa20.6■□□□□ 0.89
Ddx50-201ENSMUST00000020270 Cluap1Q8R3P7 413 aa20.6■□□□□ 0.89
Ddx50-201ENSMUST00000020270 Ppm1gQ61074 542 aa20.59■□□□□ 0.89
Ddx50-201ENSMUST00000020270 Ralbp1Q62172 648 aa20.59■□□□□ 0.89
Ddx50-201ENSMUST00000020270 Sipa1l1Q8C0T5 1782 aa20.59■□□□□ 0.89
Ddx50-201ENSMUST00000020270 IbtkQ6ZPR6 1352 aaKnown RBP20.59■□□□□ 0.89
Ddx50-201ENSMUST00000020270 GsdmaQ9EST1 446 aa20.59■□□□□ 0.89
Ddx50-201ENSMUST00000020270 Ksr2Q3UVC0 959 aa20.58■□□□□ 0.89
Ddx50-201ENSMUST00000020270 AU022751B1B0V2 589 aa20.58■□□□□ 0.88
Ddx50-201ENSMUST00000020270 Scaf11E9PZM7 1456 aaKnown RBP20.58■□□□□ 0.88
Ddx50-201ENSMUST00000020270 Efcab6Q6P1E8 1516 aa20.57■□□□□ 0.88
Ddx50-201ENSMUST00000020270 Znf521Q6KAS7 1311 aa20.56■□□□□ 0.88
Ddx50-201ENSMUST00000020270 Iqsec2Q5DU25 1478 aa20.56■□□□□ 0.88
Ddx50-201ENSMUST00000020270 Adgrb3Q80ZF8 1522 aa20.56■□□□□ 0.88
Ddx50-201ENSMUST00000020270 Stk26Q99JT2 416 aa20.56■□□□□ 0.88
Ddx50-201ENSMUST00000020270 MlecQ6ZQI3 291 aaKnown RBP20.55■□□□□ 0.88
Ddx50-201ENSMUST00000020270 U2af1Q9D883 239 aaKnown RBP20.55■□□□□ 0.88
Ddx50-201ENSMUST00000020270 Trpm1Q2TV84 1622 aa20.55■□□□□ 0.88
Ddx50-201ENSMUST00000020270 Trim58Q5NCC9 485 aa20.55■□□□□ 0.88
Ddx50-201ENSMUST00000020270 Senp3Q9EP97 568 aaKnown RBP20.55■□□□□ 0.88
Ddx50-201ENSMUST00000020270 Adamtsl3G3UXC7 1706 aa20.54■□□□□ 0.88
Ddx50-201ENSMUST00000020270 Spryd3E9Q9B3 442 aa20.54■□□□□ 0.88
Ddx50-201ENSMUST00000020270 Safb2Q80YR5 991 aaKnown RBP20.53■□□□□ 0.88
Ddx50-201ENSMUST00000020270 Ccdc9Q8VC31 543 aaKnown RBP20.53■□□□□ 0.88
Ddx50-201ENSMUST00000020270 Znf330Q922H9 316 aa20.53■□□□□ 0.88
Ddx50-201ENSMUST00000020270 Gprasp1Q5U4C1 1347 aa20.52■□□□□ 0.88
Ddx50-201ENSMUST00000020270 DnmbpQ6TXD4 1580 aa20.52■□□□□ 0.88
Ddx50-201ENSMUST00000020270 Ppp1r9bQ6R891 817 aaKnown RBP20.52■□□□□ 0.87
Ddx50-201ENSMUST00000020270 Myom2Q14BI5 1463 aa20.51■□□□□ 0.87
Ddx50-201ENSMUST00000020270 Tsen2Q6P7W5 460 aa20.51■□□□□ 0.87
Ddx50-201ENSMUST00000020270 Map4k4P97820 1233 aaKnown RBP20.5■□□□□ 0.87
Ddx50-201ENSMUST00000020270 Cald1E9QA15 768 aaKnown RBP20.5■□□□□ 0.87
Ddx50-201ENSMUST00000020270 Amer1Q7TS75 1132 aa20.5■□□□□ 0.87
Ddx50-201ENSMUST00000020270 Lrrc7Q80TE7 1490 aa20.49■□□□□ 0.87
Ddx50-201ENSMUST00000020270 Zmym3Q9JLM4 1370 aa20.48■□□□□ 0.87
Ddx50-201ENSMUST00000020270 Uggt1Q6P5E4 1551 aa20.47■□□□□ 0.87
Ddx50-201ENSMUST00000020270 AU019823E9PUQ3 292 aa20.47■□□□□ 0.87
Ddx50-201ENSMUST00000020270 Stard8Q8K031 1019 aa20.47■□□□□ 0.87
Ddx50-201ENSMUST00000020270 Nutm1Q8BHP2 1126 aa20.46■□□□□ 0.87
Ddx50-201ENSMUST00000020270 Atp1b4Q99ME6 356 aa20.46■□□□□ 0.87
Ddx50-201ENSMUST00000020270 Tnpo1Q8BFY9 898 aaKnown RBP20.46■□□□□ 0.87
Ddx50-201ENSMUST00000020270 Alpk3Q924C5 1678 aa20.45■□□□□ 0.86
Ddx50-201ENSMUST00000020270 Ppp2r3aB2RXC8 1150 aa20.45■□□□□ 0.86
Ddx50-201ENSMUST00000020270 Dusp27Q148W8 1138 aa20.45■□□□□ 0.86
Ddx50-201ENSMUST00000020270 Aplp1Q03157 653 aa20.44■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms