RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Hsp90aa1P07901 733 aaKnown RBP24.36■■□□□ 1.49
Shkbp1-201ENSMUST00000003857 Ift172Q6VH22 1749 aa24.35■■□□□ 1.49
Shkbp1-201ENSMUST00000003857 Arid3cA6PWV5 409 aa24.35■■□□□ 1.49
Shkbp1-201ENSMUST00000003857 Mapk8ip3Q9ESN9 1337 aa24.35■■□□□ 1.49
Shkbp1-201ENSMUST00000003857 Ino80Q6ZPV2 1559 aa24.34■■□□□ 1.49
Shkbp1-201ENSMUST00000003857 MaddQ80U28 1577 aa24.34■■□□□ 1.49
Shkbp1-201ENSMUST00000003857 OvosQ3UU35 1456 aa24.34■■□□□ 1.49
Shkbp1-201ENSMUST00000003857 Gli2Q0VGT2 1544 aa24.34■■□□□ 1.49
Shkbp1-201ENSMUST00000003857 NudcO35685 332 aaKnown RBP24.33■■□□□ 1.49
Shkbp1-201ENSMUST00000003857 Plxnc1Q9QZC2 1574 aa24.32■■□□□ 1.48
Shkbp1-201ENSMUST00000003857 Map4k4P97820 1233 aaKnown RBP24.32■■□□□ 1.48
Shkbp1-201ENSMUST00000003857 Ccdc9Q8VC31 543 aaKnown RBP24.32■■□□□ 1.48
Shkbp1-201ENSMUST00000003857 Iqsec2Q5DU25 1478 aa24.32■■□□□ 1.48
Shkbp1-201ENSMUST00000003857 CanxP35564 591 aaKnown RBP24.31■■□□□ 1.48
Shkbp1-201ENSMUST00000003857 Skint5A7XUY5 1461 aa24.31■■□□□ 1.48
Shkbp1-201ENSMUST00000003857 PalldQ9ET54 1408 aa24.3■■□□□ 1.48
Shkbp1-201ENSMUST00000003857 Atp10aO54827 1508 aa24.3■■□□□ 1.48
Shkbp1-201ENSMUST00000003857 Cnga1P29974 684 aa24.3■■□□□ 1.48
Shkbp1-201ENSMUST00000003857 IbtkQ6ZPR6 1352 aaKnown RBP24.3■■□□□ 1.48
Shkbp1-201ENSMUST00000003857 Scaf11E9PZM7 1456 aaKnown RBP24.3■■□□□ 1.48
Shkbp1-201ENSMUST00000003857 Gas2l2Q5SSG4 860 aa24.3■■□□□ 1.48
Shkbp1-201ENSMUST00000003857 Eif2ak4Q9QZ05 1648 aa24.3■■□□□ 1.48
Shkbp1-201ENSMUST00000003857 Adgrl3Q80TS3 1537 aa24.3■■□□□ 1.48
Shkbp1-201ENSMUST00000003857 InsrP15208 1372 aa24.28■■□□□ 1.48
Shkbp1-201ENSMUST00000003857 Tspyl2Q7TQI8 677 aa24.28■■□□□ 1.48
Shkbp1-201ENSMUST00000003857 Cdc42bpgQ80UW5 1551 aa24.28■■□□□ 1.48
Shkbp1-201ENSMUST00000003857 Lrrc7Q80TE7 1490 aa24.27■■□□□ 1.48
Shkbp1-201ENSMUST00000003857 Znf521Q6KAS7 1311 aa24.27■■□□□ 1.48
Shkbp1-201ENSMUST00000003857 Prdm10Q3UTQ7 1184 aa24.26■■□□□ 1.47
Shkbp1-201ENSMUST00000003857 Hfm1D3Z4R1 1434 aa24.26■■□□□ 1.47
Shkbp1-201ENSMUST00000003857 AU022751B1B0V2 589 aa24.25■■□□□ 1.47
Shkbp1-201ENSMUST00000003857 P2rx7Q9Z1M0 595 aa24.25■■□□□ 1.47
Shkbp1-201ENSMUST00000003857 Adgrl1Q80TR1 1466 aa24.24■■□□□ 1.47
Shkbp1-201ENSMUST00000003857 Dnai1Q8C0M8 701 aa24.23■■□□□ 1.47
Shkbp1-201ENSMUST00000003857 AglF8VPN4 1532 aa24.23■■□□□ 1.47
Shkbp1-201ENSMUST00000003857 GsdmaQ9EST1 446 aa24.23■■□□□ 1.47
Shkbp1-201ENSMUST00000003857 Sart3Q9JLI8 962 aaKnown RBP24.23■■□□□ 1.47
Shkbp1-201ENSMUST00000003857 Stag3O70576 1240 aa24.22■■□□□ 1.47
Shkbp1-201ENSMUST00000003857 Mroh1E0CZ22 1640 aa24.22■■□□□ 1.47
Shkbp1-201ENSMUST00000003857 Pank1Q8K4K6 548 aa24.21■■□□□ 1.47
Shkbp1-201ENSMUST00000003857 Ptch1Q61115 1434 aa24.2■■□□□ 1.47
Shkbp1-201ENSMUST00000003857 AdgbG3UZ78 1657 aa24.2■■□□□ 1.47
Shkbp1-201ENSMUST00000003857 Cald1E9QA15 768 aaKnown RBP24.2■■□□□ 1.46
Shkbp1-201ENSMUST00000003857 Ppm1gQ61074 542 aa24.2■■□□□ 1.46
Shkbp1-201ENSMUST00000003857 Trim58Q5NCC9 485 aa24.2■■□□□ 1.46
Shkbp1-201ENSMUST00000003857 Ttc37F8VPK0 1563 aa24.18■■□□□ 1.46
Shkbp1-201ENSMUST00000003857 Fam135bQ9DAI6 1403 aa24.18■■□□□ 1.46
Shkbp1-201ENSMUST00000003857 Atxn3Q9CVD2 355 aa24.18■■□□□ 1.46
Shkbp1-201ENSMUST00000003857 Mre11Q61216 706 aa24.16■■□□□ 1.46
Shkbp1-201ENSMUST00000003857 Cfap65Q3V0B4 1847 aa24.16■■□□□ 1.46
Shkbp1-201ENSMUST00000003857 Hecw2Q6I6G8 1578 aa24.16■■□□□ 1.46
Shkbp1-201ENSMUST00000003857 Slc52a2Q9D8F3 450 aa24.15■■□□□ 1.46
Shkbp1-201ENSMUST00000003857 Nrxn1Q9CS84 1514 aa24.15■■□□□ 1.46
Shkbp1-201ENSMUST00000003857 Med14A2ABV5 1459 aaKnown RBP24.15■■□□□ 1.46
Shkbp1-201ENSMUST00000003857 Tmc1Q8R4P5 757 aa24.15■■□□□ 1.46
Shkbp1-201ENSMUST00000003857 CenpjQ569L8 1344 aa24.15■■□□□ 1.46
Shkbp1-201ENSMUST00000003857 AampJ3QN89 436 aa24.14■■□□□ 1.46
Shkbp1-201ENSMUST00000003857 IqubQ8CDK3 788 aa24.14■■□□□ 1.46
Shkbp1-201ENSMUST00000003857 Knl1Q66JQ7 1612 aa24.14■■□□□ 1.45
Shkbp1-201ENSMUST00000003857 Kiaa0556Q8C753 1610 aa24.14■■□□□ 1.45
Shkbp1-201ENSMUST00000003857 RereQ80TZ9 1558 aa24.14■■□□□ 1.45
Shkbp1-201ENSMUST00000003857 Ipo8Q7TMY7 1010 aa24.14■■□□□ 1.45
Shkbp1-201ENSMUST00000003857 Dip2cE9PWR4 1557 aa24.13■■□□□ 1.45
Shkbp1-201ENSMUST00000003857 Duxf3A0A0N4SV92 674 aa24.13■■□□□ 1.45
Shkbp1-201ENSMUST00000003857 Ak7Q9D2H2 614 aa24.13■■□□□ 1.45
Shkbp1-201ENSMUST00000003857 Rlbp1Q9Z275 317 aa24.12■■□□□ 1.45
Shkbp1-201ENSMUST00000003857 Trim30dE9PWL0 497 aa24.11■■□□□ 1.45
Shkbp1-201ENSMUST00000003857 Adamts7Q68SA9 1657 aa24.11■■□□□ 1.45
Shkbp1-201ENSMUST00000003857 Ccdc183A2AJB1 534 aa24.1■■□□□ 1.45
Shkbp1-201ENSMUST00000003857 Ncbp3Q8BZR9 615 aaKnown RBP24.1■■□□□ 1.45
Shkbp1-201ENSMUST00000003857 DaxxO35613 739 aa24.09■■□□□ 1.45
Shkbp1-201ENSMUST00000003857 Cul9Q80TT8 1865 aa24.09■■□□□ 1.45
Shkbp1-201ENSMUST00000003857 PrkcshO08795 521 aa24.08■■□□□ 1.45
Shkbp1-201ENSMUST00000003857 Eif2s2Q99L45 331 aaKnown RBP24.07■■□□□ 1.44
Shkbp1-201ENSMUST00000003857 Apaf1O88879 1249 aa24.06■■□□□ 1.44
Shkbp1-201ENSMUST00000003857 4930567H17RikQ3V0K5 233 aa24.06■■□□□ 1.44
Shkbp1-201ENSMUST00000003857 Tsen2Q6P7W5 460 aa24.05■■□□□ 1.44
Shkbp1-201ENSMUST00000003857 Hsp90ab1P11499 724 aaKnown RBP24.04■■□□□ 1.44
Shkbp1-201ENSMUST00000003857 U2af1Q9D883 239 aaKnown RBP24.04■■□□□ 1.44
Shkbp1-201ENSMUST00000003857 Ksr2Q3UVC0 959 aa24.03■■□□□ 1.44
Shkbp1-201ENSMUST00000003857 Arhgap23Q69ZH9 1483 aa24.02■■□□□ 1.44
Shkbp1-201ENSMUST00000003857 Ppp1r9bQ6R891 817 aaKnown RBP24.02■■□□□ 1.44
Shkbp1-201ENSMUST00000003857 Polr3glQ8R0C0 218 aa24.01■■□□□ 1.43
Shkbp1-201ENSMUST00000003857 Ccar1Q8CH18 1146 aaKnown RBP24.01■■□□□ 1.43
Shkbp1-201ENSMUST00000003857 CltcQ68FD5 1675 aaKnown RBP24■■□□□ 1.43
Shkbp1-201ENSMUST00000003857 Exosc9Q9JHI7 438 aaKnown RBP23.99■■□□□ 1.43
Shkbp1-201ENSMUST00000003857 Ppp2r3aB2RXC8 1150 aa23.97■■□□□ 1.43
Shkbp1-201ENSMUST00000003857 4933416C03RikQ3V063 378 aa23.97■■□□□ 1.43
Shkbp1-201ENSMUST00000003857 Qser1A2BIE1 1698 aa23.97■■□□□ 1.43
Shkbp1-201ENSMUST00000003857 Prrc2bQ7TPM1 1486 aaKnown RBP23.96■■□□□ 1.43
Shkbp1-201ENSMUST00000003857 Dusp27Q148W8 1138 aa23.96■■□□□ 1.43
Shkbp1-201ENSMUST00000003857 Ahdc1Q6PAL7 1594 aaKnown RBP23.96■■□□□ 1.43
Shkbp1-201ENSMUST00000003857 Irx3P81067 507 aa23.95■■□□□ 1.43
Shkbp1-201ENSMUST00000003857 Cep170bQ80U49 1574 aa23.95■■□□□ 1.42
Shkbp1-201ENSMUST00000003857 Pdlim2Q8R1G6 349 aa23.95■■□□□ 1.42
Shkbp1-201ENSMUST00000003857 Stk26Q99JT2 416 aa23.94■■□□□ 1.42
Shkbp1-201ENSMUST00000003857 Trim26Q99PN3 545 aa23.94■■□□□ 1.42
Shkbp1-201ENSMUST00000003857 Armcx1Q9CX83 456 aa23.94■■□□□ 1.42
Shkbp1-201ENSMUST00000003857 Arhgef28P97433 1693 aa23.94■■□□□ 1.42
Shkbp1-201ENSMUST00000003857 Zranb1Q7M760 708 aa23.93■■□□□ 1.42
Retrieved 100 of 22,080 RNA–protein pairs in 7.3 ms