RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C TSC3Q3E790 80 aa5.45□□□□□ -1.54
SRP54YPR088C ATX1P38636 73 aa5.44□□□□□ -1.54
SRP54YPR088C MMS2P53152 137 aa5.43□□□□□ -1.54
SRP54YPR088C ATP18P81450 59 aa5.43□□□□□ -1.54
SRP54YPR088C PBI2P0CT04 75 aaKnown RBP5.42□□□□□ -1.54
SRP54YPR088C YCR085WP25650 117 aa5.42□□□□□ -1.54
SRP54YPR088C BSC4P53841 131 aa5.42□□□□□ -1.54
SRP54YPR088C YHR007C-AQ07074 71 aa5.41□□□□□ -1.54
SRP54YPR088C YGR121W-AQ3E816 71 aa5.41□□□□□ -1.54
SRP54YPR088C YLR415CO13578 112 aa5.4□□□□□ -1.55
SRP54YPR088C EDC2P40023 145 aaPredicted RBP5.4□□□□□ -1.55
SRP54YPR088C RPL36BO14455 100 aaKnown RBP5.39□□□□□ -1.55
SRP54YPR088C YOR072WQ08486 104 aa5.39□□□□□ -1.55
SRP54YPR088C YDR381C-AQ3E6R5 114 aa5.39□□□□□ -1.55
SRP54YPR088C YBL112CQ3E7Y4 105 aa5.39□□□□□ -1.55
SRP54YPR088C YFR009W-AP0C5M9 85 aa5.38□□□□□ -1.55
SRP54YPR088C YAR1P46683 200 aa5.38□□□□□ -1.55
SRP54YPR088C INO4P13902 151 aa5.37□□□□□ -1.55
SRP54YPR088C SPG1P50088 95 aa5.37□□□□□ -1.55
SRP54YPR088C SLO1Q3E784 85 aa5.37□□□□□ -1.55
SRP54YPR088C YHR139C-AO13536 103 aa5.37□□□□□ -1.55
SRP54YPR088C KRE1P17260 313 aa5.36□□□□□ -1.55
SRP54YPR088C SKI6P46948 246 aaPredicted RBP5.35□□□□□ -1.55
SRP54YPR088C YJR085CP47131 105 aaKnown RBP5.34□□□□□ -1.56
SRP54YPR088C RSM19P53733 91 aaPredicted RBP5.34□□□□□ -1.56
SRP54YPR088C TDA8Q6B2U8 126 aa5.33□□□□□ -1.56
SRP54YPR088C ICS3P47034 131 aa5.32□□□□□ -1.56
SRP54YPR088C DDR48P18899 430 aaKnown RBP5.31□□□□□ -1.56
SRP54YPR088C RSM18P40033 138 aa5.31□□□□□ -1.56
SRP54YPR088C YHR213W-BQ8TGK1 99 aa5.31□□□□□ -1.56
SRP54YPR088C RUB1Q03919 77 aa5.3□□□□□ -1.56
SRP54YPR088C YAL063C-AQ3E791 96 aa5.3□□□□□ -1.56
SRP54YPR088C YMR230W-AQ3E7B5 62 aa5.3□□□□□ -1.56
SRP54YPR088C EDC1P53080 175 aaPredicted RBP5.3□□□□□ -1.56
SRP54YPR088C YGL149WP53116 101 aa5.3□□□□□ -1.56
SRP54YPR088C SHH4Q06236 168 aa5.3□□□□□ -1.56
SRP54YPR088C YOR268CQ08734 132 aa5.3□□□□□ -1.56
SRP54YPR088C RAD6P06104 172 aa5.29□□□□□ -1.56
SRP54YPR088C YNL184CP53876 108 aa5.29□□□□□ -1.56
SRP54YPR088C ISD11Q6Q560 94 aa5.29□□□□□ -1.56
SRP54YPR088C COX23P38824 151 aa5.27□□□□□ -1.57
SRP54YPR088C YJL133C-AQ3E7A3 74 aa5.27□□□□□ -1.57
SRP54YPR088C YBR027CP38220 110 aa5.26□□□□□ -1.57
SRP54YPR088C TDA2P40045 126 aa5.26□□□□□ -1.57
SRP54YPR088C RPL38P49167 78 aaKnown RBP5.26□□□□□ -1.57
SRP54YPR088C EMC6Q12431 108 aa5.26□□□□□ -1.57
SRP54YPR088C ECM19Q06011 112 aa5.25□□□□□ -1.57
SRP54YPR088C YFL041W-AQ3E817 63 aa5.25□□□□□ -1.57
SRP54YPR088C YJL197C-AP0C5P0 93 aa5.23□□□□□ -1.57
SRP54YPR088C YFL067WP43537 175 aa5.23□□□□□ -1.57
SRP54YPR088C YFL065CP43539 102 aa5.23□□□□□ -1.57
SRP54YPR088C YLR162WQ06235 118 aa5.23□□□□□ -1.57
SRP54YPR088C YPR203WQ08994 102 aa5.23□□□□□ -1.57
SRP54YPR088C MIC10Q96VH5 97 aa5.23□□□□□ -1.57
SRP54YPR088C YOL014WQ08110 124 aa5.22□□□□□ -1.57
SRP54YPR088C YEL045CP32616 141 aa5.21□□□□□ -1.58
SRP54YPR088C YER175W-AQ8TGU4 54 aa5.21□□□□□ -1.58
SRP54YPR088C YHL042WP38729 150 aa5.2□□□□□ -1.58
SRP54YPR088C RPP2AP05319 106 aaKnown RBP5.19□□□□□ -1.58
SRP54YPR088C ATP20Q12233 115 aa5.19□□□□□ -1.58
SRP54YPR088C COF1Q03048 143 aaKnown RBP5.19□□□□□ -1.58
SRP54YPR088C YLR285C-AQ3E771 56 aa5.19□□□□□ -1.58
SRP54YPR088C YSY6P38374 65 aa5.18□□□□□ -1.58
SRP54YPR088C YLR157W-DP0CE99 70 aa5.17□□□□□ -1.58
SRP54YPR088C YDR010CQ12426 110 aa5.17□□□□□ -1.58
SRP54YPR088C YCR050CP25630 102 aa5.16□□□□□ -1.58
SRP54YPR088C YOL097W-AQ3E7Y9 61 aa5.16□□□□□ -1.58
SRP54YPR088C KTI11Q3E840 82 aa5.16□□□□□ -1.58
SRP54YPR088C KSH1Q8TGJ3 72 aa5.15□□□□□ -1.58
SRP54YPR088C YKL183C-AQ3E765 70 aa5.14□□□□□ -1.59
SRP54YPR088C YOR304C-AO14468 76 aa5.12□□□□□ -1.59
SRP54YPR088C HOT13P36078 116 aa5.1□□□□□ -1.59
SRP54YPR088C YCR043CP25361 127 aa5.09□□□□□ -1.59
SRP54YPR088C YBR121C-AP0C5L4 52 aa5.08□□□□□ -1.6
SRP54YPR088C YHL005CP38752 130 aa5.06□□□□□ -1.6
SRP54YPR088C YHL018WP38744 120 aaPredicted RBP5.05□□□□□ -1.6
SRP54YPR088C YAR064WP39563 99 aa5.05□□□□□ -1.6
SRP54YPR088C YGR039WP53225 103 aa5.05□□□□□ -1.6
SRP54YPR088C YDR119W-AQ2V2P9 66 aa5.05□□□□□ -1.6
SRP54YPR088C RPL36AP05745 100 aaPredicted RBP5.04□□□□□ -1.6
SRP54YPR088C YPL038W-AQ3E7B4 63 aa5.02□□□□□ -1.61
SRP54YPR088C YOR314WQ12506 109 aa5.01□□□□□ -1.61
SRP54YPR088C YPL080CQ02826 108 aa4.99□□□□□ -1.61
SRP54YPR088C COX7P10174 60 aa4.97□□□□□ -1.61
SRP54YPR088C YDL012CQ12489 107 aa4.97□□□□□ -1.61
SRP54YPR088C NOP10Q6Q547 58 aaPredicted RBP4.97□□□□□ -1.61
SRP54YPR088C YHR073W-AP0C5N7 58 aa4.96□□□□□ -1.62
SRP54YPR088C YPR153WQ06537 140 aa4.94□□□□□ -1.62
SRP54YPR088C YDR246W-AQ3E763 66 aa4.94□□□□□ -1.62
SRP54YPR088C YOL013W-AP0C272 63 aaPredicted RBP4.93□□□□□ -1.62
SRP54YPR088C YLR361C-AQ3E795 98 aa4.92□□□□□ -1.62
SRP54YPR088C YIL102CP40488 101 aa4.91□□□□□ -1.62
SRP54YPR088C LIP1Q03579 150 aa4.91□□□□□ -1.62
SRP54YPR088C YER187WP40102 141 aa4.9□□□□□ -1.62
SRP54YPR088C CMC4Q3E7A9 73 aa4.9□□□□□ -1.62
SRP54YPR088C YNL122CP53921 115 aaPredicted RBP4.9□□□□□ -1.63
SRP54YPR088C AIM4P38305 123 aaPredicted RBP4.88□□□□□ -1.63
SRP54YPR088C TOM6P33448 61 aa4.87□□□□□ -1.63
SRP54YPR088C YOL166W-AQ8TGJ1 51 aa4.86□□□□□ -1.63
SRP54YPR088C YDR182W-AQ3E796 67 aa4.86□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms