RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W YER039C-AP0CD97 72 aa3.83□□□□□ -1.8
PDH1YPR002W YER187WP40102 141 aa3.83□□□□□ -1.8
PDH1YPR002W YFL019CP43576 117 aa3.83□□□□□ -1.8
PDH1YPR002W YLR281CQ05863 155 aa3.83□□□□□ -1.8
PDH1YPR002W YDR115WQ04598 105 aa3.82□□□□□ -1.8
PDH1YPR002W YBL039W-BP0C268 59 aa3.81□□□□□ -1.8
PDH1YPR002W AQY2P0CD90 149 aa3.81□□□□□ -1.8
PDH1YPR002W YAL064WP39711 94 aa3.81□□□□□ -1.8
PDH1YPR002W IGD1P43598 195 aa3.81□□□□□ -1.8
PDH1YPR002W SMD1Q02260 146 aaPredicted RBP3.81□□□□□ -1.8
PDH1YPR002W YLR307C-AQ3E825 87 aa3.81□□□□□ -1.8
PDH1YPR002W YPR010C-AA5Z2X5 72 aa3.8□□□□□ -1.8
PDH1YPR002W FYV5P25585 152 aa3.8□□□□□ -1.8
PDH1YPR002W YCR050CP25630 102 aa3.8□□□□□ -1.8
PDH1YPR002W RSM18P40033 138 aa3.8□□□□□ -1.8
PDH1YPR002W SGF11Q03067 99 aa3.8□□□□□ -1.8
PDH1YPR002W YBR230W-AQ3E762 66 aa3.8□□□□□ -1.8
PDH1YPR002W TSC3Q3E790 80 aa3.8□□□□□ -1.8
PDH1YPR002W YLL066W-BQ8TGJ7 56 aa3.8□□□□□ -1.8
PDH1YPR002W ATP20Q12233 115 aa3.79□□□□□ -1.8
PDH1YPR002W RPL26AP05743 127 aaKnown RBP3.78□□□□□ -1.8
PDH1YPR002W RPL38P49167 78 aaKnown RBP3.78□□□□□ -1.8
PDH1YPR002W RPL26BP53221 127 aaKnown RBP3.78□□□□□ -1.8
PDH1YPR002W YKL183C-AQ3E765 70 aa3.78□□□□□ -1.8
PDH1YPR002W ICS3P47034 131 aa3.77□□□□□ -1.81
PDH1YPR002W YOL014WQ08110 124 aa3.77□□□□□ -1.81
PDH1YPR002W YGR035W-AQ45U48 73 aa3.77□□□□□ -1.81
PDH1YPR002W AIM4P38305 123 aaPredicted RBP3.76□□□□□ -1.81
PDH1YPR002W COX23P38824 151 aa3.76□□□□□ -1.81
PDH1YPR002W TDA2P40045 126 aa3.76□□□□□ -1.81
PDH1YPR002W SFT1P43682 97 aa3.76□□□□□ -1.81
PDH1YPR002W YJL127C-BQ3E828 52 aa3.76□□□□□ -1.81
PDH1YPR002W NOP10Q6Q547 58 aaPredicted RBP3.76□□□□□ -1.81
PDH1YPR002W SPC1P46965 94 aa3.75□□□□□ -1.81
PDH1YPR002W YRA2P36036 203 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
PDH1YPR002W EDC2P40023 145 aaPredicted RBP3.74□□□□□ -1.81
PDH1YPR002W SBH1P52870 82 aa3.74□□□□□ -1.81
PDH1YPR002W YOR314WQ12506 109 aa3.74□□□□□ -1.81
PDH1YPR002W YNL042W-BQ3E7Z2 85 aa3.74□□□□□ -1.81
PDH1YPR002W YHR213W-BQ8TGK1 99 aa3.74□□□□□ -1.81
PDH1YPR002W YOL166W-AQ8TGJ1 51 aa3.73□□□□□ -1.81
PDH1YPR002W BET1P22804 142 aa3.72□□□□□ -1.81
PDH1YPR002W YDR182W-AQ3E796 67 aa3.72□□□□□ -1.81
PDH1YPR002W RTC6O14464 93 aa3.72□□□□□ -1.81
PDH1YPR002W RRT15Q3E811 62 aa3.72□□□□□ -1.81
PDH1YPR002W TDA8Q6B2U8 126 aa3.72□□□□□ -1.81
PDH1YPR002W YJL133C-AQ3E7A3 74 aa3.71□□□□□ -1.82
PDH1YPR002W YCR043CP25361 127 aa3.7□□□□□ -1.82
PDH1YPR002W RPL36BO14455 100 aaKnown RBP3.69□□□□□ -1.82
PDH1YPR002W RPL36AP05745 100 aaPredicted RBP3.69□□□□□ -1.82
PDH1YPR002W ECM19Q06011 112 aa3.69□□□□□ -1.82
PDH1YPR002W Q0032Q9ZZX7 96 aa3.69□□□□□ -1.82
PDH1YPR002W YEL045CP32616 141 aa3.68□□□□□ -1.82
PDH1YPR002W SPT4P32914 102 aaPredicted RBP3.68□□□□□ -1.82
PDH1YPR002W KSH1Q8TGJ3 72 aa3.68□□□□□ -1.82
PDH1YPR002W GIS2P53849 153 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
PDH1YPR002W YAR023CD6VPM8 179 aa3.67□□□□□ -1.82
PDH1YPR002W AUA1P32450 94 aa3.67□□□□□ -1.82
PDH1YPR002W YGL193CP53097 103 aa3.67□□□□□ -1.82
PDH1YPR002W YLR162WQ06235 118 aa3.67□□□□□ -1.82
PDH1YPR002W KTI11Q3E840 82 aa3.67□□□□□ -1.82
PDH1YPR002W SNA2P56508 79 aa3.66□□□□□ -1.82
PDH1YPR002W YGR164WP53291 111 aa3.65□□□□□ -1.82
PDH1YPR002W YHR007C-AQ07074 71 aa3.65□□□□□ -1.82
PDH1YPR002W YGR121W-AQ3E816 71 aa3.65□□□□□ -1.82
PDH1YPR002W RPS28BP0C0X0 67 aaKnown RBP3.64□□□□□ -1.83
PDH1YPR002W YJL197C-AP0C5P0 93 aa3.64□□□□□ -1.83
PDH1YPR002W BSC4P53841 131 aa3.64□□□□□ -1.83
PDH1YPR002W YLR412C-AQ3E742 68 aa3.64□□□□□ -1.83
PDH1YPR002W YGL041C-BQ3E750 60 aa3.64□□□□□ -1.83
PDH1YPR002W RPS28AQ3E7X9 67 aaPredicted RBP3.64□□□□□ -1.83
PDH1YPR002W MIC10Q96VH5 97 aa3.64□□□□□ -1.83
PDH1YPR002W YCL042WP25572 119 aa3.63□□□□□ -1.83
PDH1YPR002W YHL005CP38752 130 aa3.63□□□□□ -1.83
PDH1YPR002W PEX22P39718 180 aa3.63□□□□□ -1.83
PDH1YPR002W DDR2P89113 61 aa3.63□□□□□ -1.83
PDH1YPR002W LIP1Q03579 150 aa3.63□□□□□ -1.83
PDH1YPR002W YOR072WQ08486 104 aa3.63□□□□□ -1.83
PDH1YPR002W YBR121C-AP0C5L4 52 aa3.63□□□□□ -1.83
PDH1YPR002W RPS30AP0CX33 63 aaKnown RBP3.62□□□□□ -1.83
PDH1YPR002W RPS30BP0CX34 63 aaKnown RBP3.62□□□□□ -1.83
PDH1YPR002W YOL013W-AP0C272 63 aaPredicted RBP3.61□□□□□ -1.83
PDH1YPR002W DYN1P36022 4092 aa3.61□□□□□ -1.83
PDH1YPR002W YIL102CP40488 101 aa3.59□□□□□ -1.83
PDH1YPR002W YOR268CQ08734 132 aa3.59□□□□□ -1.84
PDH1YPR002W YAR064WP39563 99 aa3.58□□□□□ -1.84
PDH1YPR002W YMR230W-AQ3E7B5 62 aa3.58□□□□□ -1.84
PDH1YPR002W HHF1P02309 103 aaKnown RBP3.56□□□□□ -1.84
PDH1YPR002W YOR381W-AQ3E804 55 aa3.56□□□□□ -1.84
PDH1YPR002W YKL065W-AQ2V2P2 73 aa3.55□□□□□ -1.84
PDH1YPR002W YMR122CQ03879 124 aa3.55□□□□□ -1.84
PDH1YPR002W YHR125WP38831 101 aa3.54□□□□□ -1.84
PDH1YPR002W YDL012CQ12489 107 aa3.52□□□□□ -1.85
PDH1YPR002W YBR027CP38220 110 aa3.51□□□□□ -1.85
PDH1YPR002W YER188C-AP0C0V2 99 aa3.51□□□□□ -1.85
PDH1YPR002W YDR034C-AP0C289 58 aa3.51□□□□□ -1.85
PDH1YPR002W YPR153WQ06537 140 aa3.51□□□□□ -1.85
PDH1YPR002W YPR195CQ06594 109 aa3.51□□□□□ -1.85
PDH1YPR002W YJR085CP47131 105 aaKnown RBP3.49□□□□□ -1.85
PDH1YPR002W SPG1P50088 95 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms