RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W PAU8P0CE92 120 aa3.61□□□□□ -1.83
CIT3YPR001W PAU11P0CE93 120 aa3.61□□□□□ -1.83
CIT3YPR001W PAU13P38725 120 aa3.61□□□□□ -1.83
CIT3YPR001W PAU4P53427 120 aa3.61□□□□□ -1.83
CIT3YPR001W PAU10Q03050 120 aa3.61□□□□□ -1.83
CIT3YPR001W PAU9Q3E770 120 aa3.61□□□□□ -1.83
CIT3YPR001W COX9P07255 59 aa3.6□□□□□ -1.83
CIT3YPR001W PAU20Q08322 120 aa3.6□□□□□ -1.83
CIT3YPR001W YCR001WP25347 104 aa3.6□□□□□ -1.83
CIT3YPR001W BSC4P53841 131 aa3.6□□□□□ -1.83
CIT3YPR001W YKL023C-AQ2V2P3 75 aa3.6□□□□□ -1.83
CIT3YPR001W MPC2P38857 129 aa3.58□□□□□ -1.84
CIT3YPR001W PMD1P32634 1753 aa3.58□□□□□ -1.84
CIT3YPR001W STT4P37297 1900 aa3.57□□□□□ -1.84
CIT3YPR001W YOL013W-AP0C272 63 aaPredicted RBP3.57□□□□□ -1.84
CIT3YPR001W MGR2Q02889 113 aa3.57□□□□□ -1.84
CIT3YPR001W RPS11AP0CX47 156 aaKnown RBP3.56□□□□□ -1.84
CIT3YPR001W RPS11BP0CX48 156 aaKnown RBP3.56□□□□□ -1.84
CIT3YPR001W FIG2P25653 1609 aa3.55□□□□□ -1.84
CIT3YPR001W LCL1Q02786 101 aa3.55□□□□□ -1.84
CIT3YPR001W YOR105WQ08504 108 aa3.55□□□□□ -1.84
CIT3YPR001W YOR314WQ12506 109 aa3.55□□□□□ -1.84
CIT3YPR001W YFL041W-AQ3E817 63 aa3.55□□□□□ -1.84
CIT3YPR001W YLR255CO13574 117 aa3.54□□□□□ -1.84
CIT3YPR001W YKL065W-AQ2V2P2 73 aa3.54□□□□□ -1.84
CIT3YPR001W YER188C-AP0C0V2 99 aa3.54□□□□□ -1.84
CIT3YPR001W MVB12P42939 101 aa3.54□□□□□ -1.84
CIT3YPR001W HUG1Q6Q5K6 68 aa3.54□□□□□ -1.84
CIT3YPR001W YDR010CQ12426 110 aa3.52□□□□□ -1.85
CIT3YPR001W YIL086CP40503 102 aa3.5□□□□□ -1.85
CIT3YPR001W YIL102CP40488 101 aa3.49□□□□□ -1.85
CIT3YPR001W COA2Q3E823 68 aa3.49□□□□□ -1.85
CIT3YPR001W SEC16P48415 2195 aaKnown RBP3.49□□□□□ -1.85
CIT3YPR001W QCR9P22289 66 aa3.47□□□□□ -1.85
CIT3YPR001W FPR2P32472 135 aa3.47□□□□□ -1.85
CIT3YPR001W SHU1P38751 150 aa3.47□□□□□ -1.85
CIT3YPR001W YAL065CO13511 128 aa3.46□□□□□ -1.86
CIT3YPR001W NOP10Q6Q547 58 aaPredicted RBP3.44□□□□□ -1.86
CIT3YPR001W YGR121W-AQ3E816 71 aa3.43□□□□□ -1.86
CIT3YPR001W POL2P21951 2222 aaKnown RBP3.43□□□□□ -1.86
CIT3YPR001W YJR128WP47162 119 aa3.42□□□□□ -1.86
CIT3YPR001W YMR007WQ03675 126 aa3.42□□□□□ -1.86
CIT3YPR001W YIL156W-BQ2V2P4 73 aa3.42□□□□□ -1.86
CIT3YPR001W TIM12P32830 109 aa3.41□□□□□ -1.86
CIT3YPR001W BEM2P39960 2167 aaKnown RBP3.4□□□□□ -1.87
CIT3YPR001W YHR173CP38864 112 aa3.39□□□□□ -1.87
CIT3YPR001W YSY6P38374 65 aa3.37□□□□□ -1.87
CIT3YPR001W PAU7P39545 55 aa3.37□□□□□ -1.87
CIT3YPR001W YNL042W-BQ3E7Z2 85 aa3.36□□□□□ -1.87
CIT3YPR001W HHY1P39982 102 aa3.35□□□□□ -1.87
CIT3YPR001W YPR108W-AQ3E7B3 70 aa3.34□□□□□ -1.88
CIT3YPR001W BPH1P25356 2167 aa3.33□□□□□ -1.88
CIT3YPR001W YMR122W-AQ3E842 84 aa3.33□□□□□ -1.88
CIT3YPR001W YGR035W-AQ45U48 73 aa3.32□□□□□ -1.88
CIT3YPR001W SPI1P40092 148 aa3.31□□□□□ -1.88
CIT3YPR001W YHR213W-BQ8TGK1 99 aa3.31□□□□□ -1.88
CIT3YPR001W YBR201C-AQ2V2Q3 67 aa3.3□□□□□ -1.88
CIT3YPR001W Q0032Q9ZZX7 96 aa3.3□□□□□ -1.88
CIT3YPR001W BLM10P43583 2143 aa3.29□□□□□ -1.88
CIT3YPR001W YDR246W-AQ3E763 66 aa3.29□□□□□ -1.88
CIT3YPR001W YDL022C-AP0C5L6 82 aa3.28□□□□□ -1.88
CIT3YPR001W YMR141CP40211 102 aa3.28□□□□□ -1.88
CIT3YPR001W HUA1P40325 198 aa3.28□□□□□ -1.88
CIT3YPR001W TOS6P48560 102 aa3.26□□□□□ -1.89
CIT3YPR001W TOM7P53507 60 aa3.26□□□□□ -1.89
CIT3YPR001W ERI1P62651 68 aaKnown RBP3.26□□□□□ -1.89
CIT3YPR001W URA2P07259 2214 aaKnown RBP3.25□□□□□ -1.89
CIT3YPR001W YGL258W-AQ3E740 77 aa3.24□□□□□ -1.89
CIT3YPR001W ATP18P81450 59 aa3.23□□□□□ -1.89
CIT3YPR001W YOR192C-CQ3E736 78 aa3.22□□□□□ -1.89
CIT3YPR001W SGF11Q03067 99 aa3.22□□□□□ -1.89
CIT3YPR001W COX7P10174 60 aa3.21□□□□□ -1.9
CIT3YPR001W YDR182W-AQ3E796 67 aa3.21□□□□□ -1.9
CIT3YPR001W YOR034C-AQ3E735 80 aa3.19□□□□□ -1.9
CIT3YPR001W YNL190WP53872 204 aa3.18□□□□□ -1.9
CIT3YPR001W NCE101Q02820 53 aa3.18□□□□□ -1.9
CIT3YPR001W YBR072C-AQ3E794 53 aa3.18□□□□□ -1.9
CIT3YPR001W YOR008C-AQ3E7B9 74 aa3.18□□□□□ -1.9
CIT3YPR001W YLR342W-AQ3E810 57 aa3.18□□□□□ -1.9
CIT3YPR001W EDC1P53080 175 aaPredicted RBP3.17□□□□□ -1.9
CIT3YPR001W YOL097W-AQ3E7Y9 61 aa3.15□□□□□ -1.91
CIT3YPR001W YOL166W-AQ8TGJ1 51 aa3.15□□□□□ -1.91
CIT3YPR001W YOR032W-AQ8TGS1 66 aa3.15□□□□□ -1.91
CIT3YPR001W YJR107C-AP0CT86 78 aa3.14□□□□□ -1.91
CIT3YPR001W ATP17Q06405 101 aa3.14□□□□□ -1.91
CIT3YPR001W RPS30AP0CX33 63 aaKnown RBP3.12□□□□□ -1.91
CIT3YPR001W RPS30BP0CX34 63 aaKnown RBP3.12□□□□□ -1.91
CIT3YPR001W RPL38P49167 78 aaKnown RBP3.09□□□□□ -1.91
CIT3YPR001W SDH6Q3E785 79 aa3.09□□□□□ -1.91
CIT3YPR001W AUA1P32450 94 aa3.09□□□□□ -1.92
CIT3YPR001W RPC10P40422 70 aa3.08□□□□□ -1.92
CIT3YPR001W HUB1Q6Q546 73 aa3.07□□□□□ -1.92
CIT3YPR001W YFR009W-AP0C5M9 85 aa3.05□□□□□ -1.92
CIT3YPR001W RPL43AP0CX25 92 aaKnown RBP3.05□□□□□ -1.92
CIT3YPR001W RPL43BP0CX26 92 aa3.05□□□□□ -1.92
CIT3YPR001W YPR010C-AA5Z2X5 72 aa3□□□□□ -1.93
CIT3YPR001W YBR200W-AQ3E755 54 aa3□□□□□ -1.93
CIT3YPR001W RPL37AP49166 88 aaKnown RBP2.99□□□□□ -1.93
CIT3YPR001W YLL006W-AQ3E814 58 aa2.99□□□□□ -1.93
CIT3YPR001W RPS27AP35997 82 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms