RNA–Protein interactions for RNA: YOL087C

DUF1, Transcript of Ubiquitin-binding protein of unknown function, yeastyeast

Gene DUF1, Length 3,351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DUF1YOL087C TY4B-JP47024 1803 aa1.86□□□□□ -2.11
DUF1YOL087C USO1P25386 1790 aa1.86□□□□□ -2.11
DUF1YOL087C AQY2P0CD90 149 aa1.85□□□□□ -2.11
DUF1YOL087C APC1P53886 1748 aa1.85□□□□□ -2.11
DUF1YOL087C RIM15P43565 1770 aa1.85□□□□□ -2.11
DUF1YOL087C MOT1P32333 1867 aa1.85□□□□□ -2.11
DUF1YOL087C YCL042WP25572 119 aa1.85□□□□□ -2.11
DUF1YOL087C YRF1-1P0CX20 1796 aa1.85□□□□□ -2.11
DUF1YOL087C YRF1-5P0CX21 1796 aa1.85□□□□□ -2.11
DUF1YOL087C YRF1-8P0CX22 1796 aa1.85□□□□□ -2.11
DUF1YOL087C RPS30AP0CX33 63 aaKnown RBP1.84□□□□□ -2.11
DUF1YOL087C RPS30BP0CX34 63 aaKnown RBP1.84□□□□□ -2.11
DUF1YOL087C BEM2P39960 2167 aaKnown RBP1.84□□□□□ -2.11
DUF1YOL087C SGF11Q03067 99 aa1.84□□□□□ -2.11
DUF1YOL087C MGR2Q02889 113 aa1.84□□□□□ -2.12
DUF1YOL087C YBR201C-AQ2V2Q3 67 aa1.84□□□□□ -2.12
DUF1YOL087C YMR122W-AQ3E842 84 aa1.84□□□□□ -2.12
DUF1YOL087C DNF2Q12675 1612 aa1.83□□□□□ -2.12
DUF1YOL087C IML1P47170 1584 aa1.83□□□□□ -2.12
DUF1YOL087C YBT1P32386 1661 aa1.83□□□□□ -2.12
DUF1YOL087C LCL1Q02786 101 aa1.82□□□□□ -2.12
DUF1YOL087C YNL146C-AQ3E7Z1 64 aa1.82□□□□□ -2.12
DUF1YOL087C BLM10P43583 2143 aa1.82□□□□□ -2.12
DUF1YOL087C YOR093CQ12275 1648 aa1.81□□□□□ -2.12
DUF1YOL087C MVB12P42939 101 aa1.81□□□□□ -2.12
DUF1YOL087C Q0032Q9ZZX7 96 aa1.81□□□□□ -2.12
DUF1YOL087C CHC1P22137 1653 aaKnown RBP1.8□□□□□ -2.12
DUF1YOL087C HFA1P32874 2273 aa1.8□□□□□ -2.12
DUF1YOL087C YNL122CP53921 115 aaPredicted RBP1.8□□□□□ -2.12
DUF1YOL087C YMR007WQ03675 126 aa1.8□□□□□ -2.12
DUF1YOL087C YDR182W-AQ3E796 67 aa1.8□□□□□ -2.12
DUF1YOL087C SHU1P38751 150 aa1.79□□□□□ -2.12
DUF1YOL087C MLP2P40457 1679 aa1.79□□□□□ -2.12
DUF1YOL087C NTE1Q04958 1679 aa1.79□□□□□ -2.12
DUF1YOL087C ATP17Q06405 101 aa1.79□□□□□ -2.12
DUF1YOL087C YIL086CP40503 102 aa1.78□□□□□ -2.12
DUF1YOL087C POL2P21951 2222 aaKnown RBP1.78□□□□□ -2.12
DUF1YOL087C ATP18P81450 59 aa1.78□□□□□ -2.12
DUF1YOL087C YCR001WP25347 104 aa1.78□□□□□ -2.13
DUF1YOL087C YOL166W-AQ8TGJ1 51 aa1.78□□□□□ -2.13
DUF1YOL087C RKR1Q04781 1562 aa1.77□□□□□ -2.13
DUF1YOL087C BUD3P25558 1636 aa1.77□□□□□ -2.13
DUF1YOL087C HUB1Q6Q546 73 aa1.77□□□□□ -2.13
DUF1YOL087C NUP188P52593 1655 aaKnown RBP1.77□□□□□ -2.13
DUF1YOL087C YPR096CO13587 100 aa1.77□□□□□ -2.13
DUF1YOL087C YHR086W-AQ3E746 53 aa1.76□□□□□ -2.13
DUF1YOL087C SDH6Q3E785 79 aa1.76□□□□□ -2.13
DUF1YOL087C YJL009WP47078 108 aa1.76□□□□□ -2.13
DUF1YOL087C SEC16P48415 2195 aaKnown RBP1.76□□□□□ -2.13
DUF1YOL087C YDL012CQ12489 107 aa1.75□□□□□ -2.13
DUF1YOL087C FAB1P34756 2278 aa1.75□□□□□ -2.13
DUF1YOL087C YBR032WP38223 100 aa1.75□□□□□ -2.13
DUF1YOL087C HUG1Q6Q5K6 68 aa1.75□□□□□ -2.13
DUF1YOL087C YLR146W-AQ2V2P1 62 aa1.74□□□□□ -2.13
DUF1YOL087C ARO1P08566 1588 aaKnown RBP1.74□□□□□ -2.13
DUF1YOL087C URA2P07259 2214 aaKnown RBP1.73□□□□□ -2.13
DUF1YOL087C PDR15Q04182 1529 aaKnown RBP1.73□□□□□ -2.13
DUF1YOL087C YOL013W-AP0C272 63 aaPredicted RBP1.73□□□□□ -2.13
DUF1YOL087C URB1P34241 1764 aaKnown RBP1.73□□□□□ -2.13
DUF1YOL087C YOR072WQ08486 104 aa1.72□□□□□ -2.13
DUF1YOL087C YHR212W-AP0CX91 67 aa1.72□□□□□ -2.13
DUF1YOL087C YOL097W-AQ3E7Y9 61 aa1.71□□□□□ -2.14
DUF1YOL087C YLR157W-DP0CE99 70 aa1.71□□□□□ -2.14
DUF1YOL087C YPR108W-AQ3E7B3 70 aa1.71□□□□□ -2.14
DUF1YOL087C YMR001C-AQ8TGS9 76 aa1.71□□□□□ -2.14
DUF1YOL087C COX7P10174 60 aa1.7□□□□□ -2.14
DUF1YOL087C YJR107C-AP0CT86 78 aa1.7□□□□□ -2.14
DUF1YOL087C YIL102CP40488 101 aa1.7□□□□□ -2.14
DUF1YOL087C YJR128WP47162 119 aa1.7□□□□□ -2.14
DUF1YOL087C YBL039W-BP0C268 59 aa1.69□□□□□ -2.14
DUF1YOL087C YMR141CP40211 102 aa1.69□□□□□ -2.14
DUF1YOL087C SNF2P22082 1703 aa1.69□□□□□ -2.14
DUF1YOL087C DNF3Q12674 1656 aa1.69□□□□□ -2.14
DUF1YOL087C RPC10P40422 70 aa1.68□□□□□ -2.14
DUF1YOL087C RPL38P49167 78 aaKnown RBP1.68□□□□□ -2.14
DUF1YOL087C VMR1P38735 1592 aa1.67□□□□□ -2.14
DUF1YOL087C YAR064WP39563 99 aa1.66□□□□□ -2.14
DUF1YOL087C YBR200W-AQ3E755 54 aa1.65□□□□□ -2.15
DUF1YOL087C NUP192P47054 1683 aa1.64□□□□□ -2.15
DUF1YOL087C HHY1P39982 102 aa1.64□□□□□ -2.15
DUF1YOL087C AUA1P32450 94 aa1.61□□□□□ -2.15
DUF1YOL087C GCN2P15442 1659 aa1.6□□□□□ -2.15
DUF1YOL087C YOR011W-AQ3E807 68 aa1.6□□□□□ -2.15
DUF1YOL087C YPR010C-AA5Z2X5 72 aa1.6□□□□□ -2.15
DUF1YOL087C YOR394C-AQ8TGJ0 55 aa1.59□□□□□ -2.15
DUF1YOL087C YBR072C-AQ3E794 53 aa1.58□□□□□ -2.16
DUF1YOL087C SEN1Q00416 2231 aaKnown RBP1.58□□□□□ -2.16
DUF1YOL087C RPL43AP0CX25 92 aaKnown RBP1.56□□□□□ -2.16
DUF1YOL087C RPL43BP0CX26 92 aa1.56□□□□□ -2.16
DUF1YOL087C YGR025WP53216 100 aa1.56□□□□□ -2.16
DUF1YOL087C RPS27AP35997 82 aaKnown RBP1.56□□□□□ -2.16
DUF1YOL087C OLI1P61829 76 aa1.55□□□□□ -2.16
DUF1YOL087C YHR213W-BQ8TGK1 99 aa1.55□□□□□ -2.16
DUF1YOL087C COA2Q3E823 68 aa1.55□□□□□ -2.16
DUF1YOL087C FIG2P25653 1609 aa1.54□□□□□ -2.16
DUF1YOL087C YFR009W-AP0C5M9 85 aa1.53□□□□□ -2.16
DUF1YOL087C TOS6P48560 102 aa1.53□□□□□ -2.17
DUF1YOL087C HUA1P40325 198 aa1.52□□□□□ -2.17
DUF1YOL087C YBR230W-AQ3E762 66 aa1.49□□□□□ -2.17
DUF1YOL087C YBL044WP38194 122 aa1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 93.7 ms