RNA–Protein interactions for RNA: YNR028W

CPR8, Transcript of Peptidyl-prolyl cis-trans isomerase (cyclophilin), yeastyeast

Gene CPR8, Length 927 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPR8YNR028W HUB1Q6Q546 73 aa2.07□□□□□ -2.08
CPR8YNR028W NOP10Q6Q547 58 aaPredicted RBP2.07□□□□□ -2.08
CPR8YNR028W CYR1P08678 2026 aaKnown RBP2.07□□□□□ -2.08
CPR8YNR028W YDR182W-AQ3E796 67 aa2.06□□□□□ -2.08
CPR8YNR028W MRPS12P53732 153 aa2.05□□□□□ -2.08
CPR8YNR028W ERI1P62651 68 aaKnown RBP2.05□□□□□ -2.08
CPR8YNR028W NUP170P38181 1502 aa2.05□□□□□ -2.08
CPR8YNR028W MLP2P40457 1679 aa2.05□□□□□ -2.08
CPR8YNR028W NUP188P52593 1655 aaKnown RBP2.05□□□□□ -2.08
CPR8YNR028W SLH1P53327 1967 aaKnown RBP2.05□□□□□ -2.08
CPR8YNR028W BRR2P32639 2163 aaKnown RBP2.04□□□□□ -2.08
CPR8YNR028W URB1P34241 1764 aaKnown RBP2.04□□□□□ -2.08
CPR8YNR028W YIL156W-BQ2V2P4 73 aa2.04□□□□□ -2.08
CPR8YNR028W YOR093CQ12275 1648 aa2.03□□□□□ -2.08
CPR8YNR028W DNF2Q12675 1612 aa2.03□□□□□ -2.08
CPR8YNR028W ARO1P08566 1588 aaKnown RBP2.03□□□□□ -2.08
CPR8YNR028W VMR1P38735 1592 aa2.03□□□□□ -2.08
CPR8YNR028W YLR255CO13574 117 aa2.03□□□□□ -2.08
CPR8YNR028W SHU1P38751 150 aa2.03□□□□□ -2.08
CPR8YNR028W YMR141CP40211 102 aa2.03□□□□□ -2.08
CPR8YNR028W ATP17Q06405 101 aa2.03□□□□□ -2.08
CPR8YNR028W YNL042W-BQ3E7Z2 85 aa2.03□□□□□ -2.08
CPR8YNR028W AQY2P0CD90 149 aa2.02□□□□□ -2.09
CPR8YNR028W YAR064WP39563 99 aa2.02□□□□□ -2.09
CPR8YNR028W SGF11Q03067 99 aa2.02□□□□□ -2.09
CPR8YNR028W YCR001WP25347 104 aa2.01□□□□□ -2.09
CPR8YNR028W YIL102CP40488 101 aa2□□□□□ -2.09
CPR8YNR028W MVB12P42939 101 aa2□□□□□ -2.09
CPR8YNR028W ATP18P81450 59 aa2□□□□□ -2.09
CPR8YNR028W YDR246W-AQ3E763 66 aa2□□□□□ -2.09
CPR8YNR028W YMR122W-AQ3E842 84 aa2□□□□□ -2.09
CPR8YNR028W RKR1Q04781 1562 aa2□□□□□ -2.09
CPR8YNR028W DNF3Q12674 1656 aa1.99□□□□□ -2.09
CPR8YNR028W COX7P10174 60 aa1.99□□□□□ -2.09
CPR8YNR028W MGR2Q02889 113 aa1.99□□□□□ -2.09
CPR8YNR028W CHC1P22137 1653 aaKnown RBP1.99□□□□□ -2.09
CPR8YNR028W YBR201C-AQ2V2Q3 67 aa1.98□□□□□ -2.09
CPR8YNR028W Q0032Q9ZZX7 96 aa1.98□□□□□ -2.09
CPR8YNR028W YDL022C-AP0C5L6 82 aa1.97□□□□□ -2.09
CPR8YNR028W SDH6Q3E785 79 aa1.97□□□□□ -2.09
CPR8YNR028W HUG1Q6Q5K6 68 aa1.97□□□□□ -2.09
CPR8YNR028W LCL1Q02786 101 aa1.96□□□□□ -2.1
CPR8YNR028W RPS30AP0CX33 63 aaKnown RBP1.95□□□□□ -2.1
CPR8YNR028W RPS30BP0CX34 63 aaKnown RBP1.95□□□□□ -2.1
CPR8YNR028W YHR212W-AP0CX91 67 aa1.95□□□□□ -2.1
CPR8YNR028W YJR128WP47162 119 aa1.95□□□□□ -2.1
CPR8YNR028W YOR032W-AQ8TGS1 66 aa1.95□□□□□ -2.1
CPR8YNR028W NUP192P47054 1683 aa1.94□□□□□ -2.1
CPR8YNR028W YKL018C-AQ3E7A7 99 aa1.94□□□□□ -2.1
CPR8YNR028W ACC1Q00955 2233 aaKnown RBP1.94□□□□□ -2.1
CPR8YNR028W YOL013W-AP0C272 63 aaPredicted RBP1.93□□□□□ -2.1
CPR8YNR028W RPL38P49167 78 aaKnown RBP1.93□□□□□ -2.1
CPR8YNR028W SNF2P22082 1703 aa1.92□□□□□ -2.1
CPR8YNR028W HHY1P39982 102 aa1.92□□□□□ -2.1
CPR8YNR028W SMX2P40204 77 aaKnown RBP1.92□□□□□ -2.1
CPR8YNR028W YOR034C-AQ3E735 80 aa1.92□□□□□ -2.1
CPR8YNR028W PDR15Q04182 1529 aaKnown RBP1.91□□□□□ -2.1
CPR8YNR028W KOG1P38873 1557 aa1.91□□□□□ -2.1
CPR8YNR028W YJR107C-AP0CT86 78 aa1.91□□□□□ -2.1
CPR8YNR028W YNL190WP53872 204 aa1.91□□□□□ -2.1
CPR8YNR028W YLR146W-AQ2V2P1 62 aa1.91□□□□□ -2.1
CPR8YNR028W YBR072C-AQ3E794 53 aa1.91□□□□□ -2.1
CPR8YNR028W YPR108W-AQ3E7B3 70 aa1.91□□□□□ -2.1
CPR8YNR028W YBR032WP38223 100 aa1.9□□□□□ -2.11
CPR8YNR028W BPH1P25356 2167 aa1.89□□□□□ -2.11
CPR8YNR028W HIR3P47171 1648 aa1.89□□□□□ -2.11
CPR8YNR028W YOL166W-AQ8TGJ1 51 aa1.89□□□□□ -2.11
CPR8YNR028W YHR213W-BQ8TGK1 99 aa1.89□□□□□ -2.11
CPR8YNR028W YMR001C-AQ8TGS9 76 aa1.87□□□□□ -2.11
CPR8YNR028W EDC1P53080 175 aaPredicted RBP1.86□□□□□ -2.11
CPR8YNR028W BLM10P43583 2143 aa1.85□□□□□ -2.11
CPR8YNR028W YLR157W-DP0CE99 70 aa1.85□□□□□ -2.11
CPR8YNR028W YOR011W-AQ3E807 68 aa1.85□□□□□ -2.11
CPR8YNR028W SEC16P48415 2195 aaKnown RBP1.85□□□□□ -2.11
CPR8YNR028W YBL039W-BP0C268 59 aa1.84□□□□□ -2.11
CPR8YNR028W OLI1P61829 76 aa1.83□□□□□ -2.12
CPR8YNR028W ATG2P53855 1592 aa1.83□□□□□ -2.12
CPR8YNR028W HFA1P32874 2273 aa1.82□□□□□ -2.12
CPR8YNR028W POL2P21951 2222 aaKnown RBP1.82□□□□□ -2.12
CPR8YNR028W YGR025WP53216 100 aa1.81□□□□□ -2.12
CPR8YNR028W BUD3P25558 1636 aa1.8□□□□□ -2.12
CPR8YNR028W YOR192C-CQ3E736 78 aa1.8□□□□□ -2.12
CPR8YNR028W RPC10P40422 70 aa1.79□□□□□ -2.12
CPR8YNR028W YBR200W-AQ3E755 54 aa1.79□□□□□ -2.12
CPR8YNR028W GCN2P15442 1659 aa1.78□□□□□ -2.12
CPR8YNR028W YBR230W-AQ3E762 66 aa1.78□□□□□ -2.12
CPR8YNR028W HKR1P41809 1802 aa1.77□□□□□ -2.13
CPR8YNR028W YOR394C-AQ8TGJ0 55 aa1.77□□□□□ -2.13
CPR8YNR028W HUA1P40325 198 aa1.73□□□□□ -2.13
CPR8YNR028W RPL43AP0CX25 92 aaKnown RBP1.72□□□□□ -2.13
CPR8YNR028W RPL43BP0CX26 92 aa1.72□□□□□ -2.13
CPR8YNR028W YPR010C-AA5Z2X5 72 aa1.71□□□□□ -2.14
CPR8YNR028W TOS6P48560 102 aa1.7□□□□□ -2.14
CPR8YNR028W FIG2P25653 1609 aa1.67□□□□□ -2.14
CPR8YNR028W AUA1P32450 94 aa1.66□□□□□ -2.14
CPR8YNR028W RPS27AP35997 82 aaKnown RBP1.66□□□□□ -2.14
CPR8YNR028W COX9P07255 59 aa1.64□□□□□ -2.15
CPR8YNR028W SIP18P50263 79 aa1.64□□□□□ -2.15
CPR8YNR028W URA2P07259 2214 aaKnown RBP1.63□□□□□ -2.15
CPR8YNR028W YFR009W-AP0C5M9 85 aa1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms