RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A SWM2P40342 146 aa1.63□□□□□ -2.15
YSF3YNL138W-A YLR162WQ06235 118 aa1.63□□□□□ -2.15
YSF3YNL138W-A YLR363W-AQ3E747 85 aa1.63□□□□□ -2.15
YSF3YNL138W-A SUS1Q6WNK7 96 aa1.63□□□□□ -2.15
YSF3YNL138W-A KSH1Q8TGJ3 72 aa1.63□□□□□ -2.15
YSF3YNL138W-A QCR8P08525 94 aa1.62□□□□□ -2.15
YSF3YNL138W-A YBR027CP38220 110 aa1.62□□□□□ -2.15
YSF3YNL138W-A PMP3P87284 55 aa1.62□□□□□ -2.15
YSF3YNL138W-A AVO2Q04749 426 aa1.62□□□□□ -2.15
YSF3YNL138W-A ECM12O13529 151 aa1.61□□□□□ -2.15
YSF3YNL138W-A RSM19P53733 91 aaPredicted RBP1.61□□□□□ -2.15
YSF3YNL138W-A YGL194C-AQ2V2P6 80 aa1.61□□□□□ -2.15
YSF3YNL138W-A COA3Q3E7B2 85 aa1.61□□□□□ -2.15
YSF3YNL138W-A YGL014C-AP0C5N1 53 aa1.6□□□□□ -2.15
YSF3YNL138W-A CYB5P40312 120 aa1.6□□□□□ -2.15
YSF3YNL138W-A YFL065CP43539 102 aa1.6□□□□□ -2.15
YSF3YNL138W-A YMR007WQ03675 126 aa1.6□□□□□ -2.15
YSF3YNL138W-A SEN15Q04675 128 aa1.6□□□□□ -2.15
YSF3YNL138W-A IRC21Q04772 201 aa1.6□□□□□ -2.15
YSF3YNL138W-A PAU16P35994 123 aa1.59□□□□□ -2.15
YSF3YNL138W-A COX23P38824 151 aa1.59□□□□□ -2.15
YSF3YNL138W-A RPC10P40422 70 aa1.59□□□□□ -2.15
YSF3YNL138W-A YIL163CP40448 117 aa1.59□□□□□ -2.15
YSF3YNL138W-A PAU15P40585 124 aa1.59□□□□□ -2.15
YSF3YNL138W-A YMR122CQ03879 124 aa1.59□□□□□ -2.15
YSF3YNL138W-A HMRA1P0CY11 126 aa1.58□□□□□ -2.16
YSF3YNL138W-A HMRA2P0CY13 119 aa1.58□□□□□ -2.16
YSF3YNL138W-A GCV3P39726 170 aaPredicted RBP1.58□□□□□ -2.16
YSF3YNL138W-A YEL008WP40001 126 aa1.58□□□□□ -2.16
YSF3YNL138W-A RPS29AP41057 56 aaKnown RBP1.58□□□□□ -2.16
YSF3YNL138W-A YLR342W-AQ3E810 57 aa1.58□□□□□ -2.16
YSF3YNL138W-A YPR203WQ08994 102 aa1.57□□□□□ -2.16
YSF3YNL138W-A YLR285C-AQ3E771 56 aa1.57□□□□□ -2.16
YSF3YNL138W-A ENV10Q99382 181 aa1.57□□□□□ -2.16
YSF3YNL138W-A YHL005CP38752 130 aa1.56□□□□□ -2.16
YSF3YNL138W-A YMR082CQ04276 118 aa1.56□□□□□ -2.16
YSF3YNL138W-A LSM6Q06406 86 aaKnown RBP1.56□□□□□ -2.16
YSF3YNL138W-A YGL041C-BQ3E750 60 aa1.56□□□□□ -2.16
YSF3YNL138W-A YHR173CP38864 112 aa1.55□□□□□ -2.16
YSF3YNL138W-A CWP2P43497 92 aa1.55□□□□□ -2.16
YSF3YNL138W-A YHR213W-AQ8TGT4 77 aa1.55□□□□□ -2.16
YSF3YNL138W-A RSM18P40033 138 aa1.54□□□□□ -2.16
YSF3YNL138W-A YCR095W-AQ3E787 52 aa1.54□□□□□ -2.16
YSF3YNL138W-A AIM4P38305 123 aaPredicted RBP1.53□□□□□ -2.16
YSF3YNL138W-A PAU5P43575 122 aa1.53□□□□□ -2.16
YSF3YNL138W-A YJL009WP47078 108 aa1.53□□□□□ -2.16
YSF3YNL138W-A YDR042CQ03205 200 aa1.53□□□□□ -2.16
YSF3YNL138W-A QCR9P22289 66 aa1.52□□□□□ -2.17
YSF3YNL138W-A YOR072WQ08486 104 aa1.52□□□□□ -2.17
YSF3YNL138W-A RPS22AP0C0W1 130 aaKnown RBP1.51□□□□□ -2.17
YSF3YNL138W-A ICS3P47034 131 aa1.51□□□□□ -2.17
YSF3YNL138W-A MRPL31P14063 131 aaPredicted RBP1.5□□□□□ -2.17
YSF3YNL138W-A YLR146W-AQ2V2P1 62 aa1.5□□□□□ -2.17
YSF3YNL138W-A YMR175W-AQ3E766 64 aa1.5□□□□□ -2.17
YSF3YNL138W-A Q0032Q9ZZX7 96 aa1.5□□□□□ -2.17
YSF3YNL138W-A RPS29BP41058 56 aaKnown RBP1.49□□□□□ -2.17
YSF3YNL138W-A ICY1Q04329 127 aa1.49□□□□□ -2.17
YSF3YNL138W-A YCR085WP25650 117 aa1.48□□□□□ -2.17
YSF3YNL138W-A YNL122CP53921 115 aaPredicted RBP1.48□□□□□ -2.17
YSF3YNL138W-A YPL038W-AQ3E7B4 63 aa1.48□□□□□ -2.17
YSF3YNL138W-A RPS22BQ3E7Y3 130 aaKnown RBP1.48□□□□□ -2.17
YSF3YNL138W-A YAL065CO13511 128 aa1.47□□□□□ -2.17
YSF3YNL138W-A PAU1P0CE88 120 aa1.47□□□□□ -2.17
YSF3YNL138W-A PAU14P0CE89 120 aa1.47□□□□□ -2.17
YSF3YNL138W-A PAU6P0CE90 120 aa1.47□□□□□ -2.17
YSF3YNL138W-A PAU18P0CE91 120 aa1.47□□□□□ -2.17
YSF3YNL138W-A PAU8P0CE92 120 aa1.47□□□□□ -2.17
YSF3YNL138W-A PAU11P0CE93 120 aa1.47□□□□□ -2.17
YSF3YNL138W-A NHP2P32495 156 aaPredicted RBP1.47□□□□□ -2.17
YSF3YNL138W-A PAU13P38725 120 aa1.47□□□□□ -2.17
YSF3YNL138W-A YAR064WP39563 99 aa1.47□□□□□ -2.17
YSF3YNL138W-A MVB12P42939 101 aa1.47□□□□□ -2.17
YSF3YNL138W-A PAU10Q03050 120 aa1.47□□□□□ -2.17
YSF3YNL138W-A PAU9Q3E770 120 aa1.47□□□□□ -2.17
YSF3YNL138W-A AQY2P0CD90 149 aa1.46□□□□□ -2.18
YSF3YNL138W-A RPA12P32529 125 aaKnown RBP1.46□□□□□ -2.18
YSF3YNL138W-A YIL102CP40488 101 aa1.46□□□□□ -2.18
YSF3YNL138W-A PAU4P53427 120 aa1.46□□□□□ -2.18
YSF3YNL138W-A PAU20Q08322 120 aa1.46□□□□□ -2.18
YSF3YNL138W-A TOM6P33448 61 aa1.45□□□□□ -2.18
YSF3YNL138W-A PAI3P01094 68 aa1.43□□□□□ -2.18
YSF3YNL138W-A MRX7P53869 86 aa1.43□□□□□ -2.18
YSF3YNL138W-A MGR2Q02889 113 aa1.43□□□□□ -2.18
YSF3YNL138W-A YOR105WQ08504 108 aa1.43□□□□□ -2.18
YSF3YNL138W-A YOL013W-AP0C272 63 aaPredicted RBP1.42□□□□□ -2.18
YSF3YNL138W-A BSC4P53841 131 aa1.42□□□□□ -2.18
YSF3YNL138W-A YDR210WQ03482 75 aa1.42□□□□□ -2.18
YSF3YNL138W-A YGR121W-AQ3E816 71 aa1.42□□□□□ -2.18
YSF3YNL138W-A MRPS12P53732 153 aa1.41□□□□□ -2.18
YSF3YNL138W-A YNR034W-AQ3E841 98 aa1.41□□□□□ -2.18
YSF3YNL138W-A YBR292CP38357 123 aa1.4□□□□□ -2.19
YSF3YNL138W-A YBL039W-BP0C268 59 aa1.39□□□□□ -2.19
YSF3YNL138W-A ATX1P38636 73 aa1.39□□□□□ -2.19
YSF3YNL138W-A SHU1P38751 150 aa1.39□□□□□ -2.19
YSF3YNL138W-A YKL065W-AQ2V2P2 73 aa1.39□□□□□ -2.19
YSF3YNL138W-A YDR381C-AQ3E6R5 114 aa1.39□□□□□ -2.19
YSF3YNL138W-A COX19Q3E731 98 aa1.39□□□□□ -2.19
YSF3YNL138W-A HHY1P39982 102 aa1.38□□□□□ -2.19
YSF3YNL138W-A YJR128WP47162 119 aa1.38□□□□□ -2.19
YSF3YNL138W-A DDR2P89113 61 aa1.38□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms