RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C SCP1Q08873 200 aa0.93□□□□□ -2.26
VPS9YML097C IQG1Q12280 1495 aa0.92□□□□□ -2.26
VPS9YML097C FAS2P19097 1887 aaKnown RBP0.92□□□□□ -2.26
VPS9YML097C RIM15P43565 1770 aa0.92□□□□□ -2.26
VPS9YML097C RRP5Q05022 1729 aaKnown RBP0.92□□□□□ -2.26
VPS9YML097C NHP2P32495 156 aaPredicted RBP0.92□□□□□ -2.26
VPS9YML097C BSC4P53841 131 aa0.92□□□□□ -2.26
VPS9YML097C MHF2Q3E829 80 aa0.92□□□□□ -2.26
VPS9YML097C IRA2P19158 3079 aa0.92□□□□□ -2.26
VPS9YML097C TOR2P32600 2474 aaKnown RBP0.91□□□□□ -2.26
VPS9YML097C VMR1P38735 1592 aa0.91□□□□□ -2.26
VPS9YML097C TEL1P38110 2787 aa0.91□□□□□ -2.26
VPS9YML097C BCK1Q01389 1478 aa0.91□□□□□ -2.26
VPS9YML097C YNL190WP53872 204 aa0.9□□□□□ -2.27
VPS9YML097C YNL042W-BQ3E7Z2 85 aa0.9□□□□□ -2.27
VPS9YML097C SEN1Q00416 2231 aaKnown RBP0.9□□□□□ -2.27
VPS9YML097C NUP192P47054 1683 aa0.9□□□□□ -2.27
VPS9YML097C YOL164W-AQ3E7A5 60 aa0.89□□□□□ -2.27
VPS9YML097C IRA1P18963 3092 aa0.89□□□□□ -2.27
VPS9YML097C FMP27Q06179 2628 aa0.89□□□□□ -2.27
VPS9YML097C PRP8P33334 2413 aaKnown RBP0.88□□□□□ -2.27
VPS9YML097C CUP1-1P0CX80 61 aa0.88□□□□□ -2.27
VPS9YML097C CUP1-2P0CX81 61 aa0.88□□□□□ -2.27
VPS9YML097C APC1P53886 1748 aa0.88□□□□□ -2.27
VPS9YML097C RPS29BP41058 56 aaKnown RBP0.87□□□□□ -2.27
VPS9YML097C GCN1P33892 2672 aaKnown RBP0.87□□□□□ -2.27
VPS9YML097C MLP1Q02455 1875 aaKnown RBP0.87□□□□□ -2.27
VPS9YML097C RPA12P32529 125 aaKnown RBP0.86□□□□□ -2.27
VPS9YML097C PDR5P33302 1511 aaKnown RBP0.86□□□□□ -2.27
VPS9YML097C UTP10P42945 1769 aaKnown RBP0.86□□□□□ -2.27
VPS9YML097C PDX3P38075 228 aaKnown RBP0.85□□□□□ -2.27
VPS9YML097C RPC10P40422 70 aa0.85□□□□□ -2.27
VPS9YML097C YOR343CQ12484 108 aa0.85□□□□□ -2.27
VPS9YML097C Q0032Q9ZZX7 96 aa0.85□□□□□ -2.27
VPS9YML097C CSF1Q12150 2958 aa0.85□□□□□ -2.27
VPS9YML097C HKR1P41809 1802 aa0.85□□□□□ -2.27
VPS9YML097C TRA1P38811 3744 aa0.85□□□□□ -2.27
VPS9YML097C UTP20P35194 2493 aaKnown RBP0.85□□□□□ -2.27
VPS9YML097C COX7P10174 60 aa0.84□□□□□ -2.27
VPS9YML097C MOT1P32333 1867 aa0.84□□□□□ -2.28
VPS9YML097C YBR201C-AQ2V2Q3 67 aa0.83□□□□□ -2.28
VPS9YML097C YMR122W-AQ3E842 84 aa0.83□□□□□ -2.28
VPS9YML097C ECM29P38737 1868 aa0.83□□□□□ -2.28
VPS9YML097C PMD1P32634 1753 aa0.83□□□□□ -2.28
VPS9YML097C POC4Q12245 148 aaPredicted RBP0.83□□□□□ -2.28
VPS9YML097C YAL065CO13511 128 aa0.82□□□□□ -2.28
VPS9YML097C RPL38P49167 78 aaKnown RBP0.82□□□□□ -2.28
VPS9YML097C FIG2P25653 1609 aa0.81□□□□□ -2.28
VPS9YML097C YCR085WP25650 117 aa0.81□□□□□ -2.28
VPS9YML097C YNL198CP40166 100 aa0.81□□□□□ -2.28
VPS9YML097C MEC1P38111 2368 aa0.8□□□□□ -2.28
VPS9YML097C BLM10P43583 2143 aa0.8□□□□□ -2.28
VPS9YML097C CWP2P43497 92 aa0.8□□□□□ -2.28
VPS9YML097C TOM6P33448 61 aa0.79□□□□□ -2.28
VPS9YML097C PAU23Q07987 124 aa0.79□□□□□ -2.28
VPS9YML097C PAU17Q12370 124 aa0.79□□□□□ -2.28
VPS9YML097C YHR214C-DP0CX93 97 aa0.78□□□□□ -2.28
VPS9YML097C FPR2P32472 135 aa0.78□□□□□ -2.28
VPS9YML097C NOP10Q6Q547 58 aaPredicted RBP0.78□□□□□ -2.28
VPS9YML097C YBR016WP38216 128 aa0.75□□□□□ -2.29
VPS9YML097C ATP18P81450 59 aa0.75□□□□□ -2.29
VPS9YML097C YIL156W-BQ2V2P4 73 aa0.75□□□□□ -2.29
VPS9YML097C YKL068W-AQ3E826 78 aa0.75□□□□□ -2.29
VPS9YML097C DYN1P36022 4092 aa0.75□□□□□ -2.29
VPS9YML097C YJR107C-AP0CT86 78 aa0.73□□□□□ -2.29
VPS9YML097C YOR314WQ12506 109 aa0.73□□□□□ -2.29
VPS9YML097C YKL065W-AQ2V2P2 73 aa0.73□□□□□ -2.29
VPS9YML097C YPR145C-AQ2V2P0 78 aa0.72□□□□□ -2.29
VPS9YML097C YDR381C-AQ3E6R5 114 aa0.71□□□□□ -2.3
VPS9YML097C FLO1P32768 1537 aa0.7□□□□□ -2.3
VPS9YML097C YOR105WQ08504 108 aa0.7□□□□□ -2.3
VPS9YML097C SDH6Q3E785 79 aa0.7□□□□□ -2.3
VPS9YML097C BPH1P25356 2167 aa0.69□□□□□ -2.3
VPS9YML097C STT4P37297 1900 aa0.69□□□□□ -2.3
VPS9YML097C YFR009W-AP0C5M9 85 aa0.69□□□□□ -2.3
VPS9YML097C YOL097W-AQ3E7Y9 61 aa0.69□□□□□ -2.3
VPS9YML097C YDR034W-BQ6Q5X2 51 aa0.69□□□□□ -2.3
VPS9YML097C YDL022C-AP0C5L6 82 aa0.66□□□□□ -2.3
VPS9YML097C YGR121W-AQ3E816 71 aa0.66□□□□□ -2.3
VPS9YML097C SWM2P40342 146 aa0.65□□□□□ -2.31
VPS9YML097C YDR119W-AQ2V2P9 66 aa0.65□□□□□ -2.31
VPS9YML097C EDC1P53080 175 aaPredicted RBP0.64□□□□□ -2.31
VPS9YML097C SGF11Q03067 99 aa0.63□□□□□ -2.31
VPS9YML097C YPR108W-AQ3E7B3 70 aa0.63□□□□□ -2.31
VPS9YML097C YBR032WP38223 100 aa0.62□□□□□ -2.31
VPS9YML097C YDR524C-BQ3E6R4 66 aa0.61□□□□□ -2.31
VPS9YML097C MDN1Q12019 4910 aaKnown RBP0.61□□□□□ -2.31
VPS9YML097C QCR9P22289 66 aa0.6□□□□□ -2.31
VPS9YML097C ATX1P38636 73 aa0.6□□□□□ -2.31
VPS9YML097C YGR035W-AQ45U48 73 aa0.6□□□□□ -2.31
VPS9YML097C YIL134C-AQ45U18 67 aa0.58□□□□□ -2.32
VPS9YML097C YHR213W-AQ8TGT4 77 aa0.58□□□□□ -2.32
VPS9YML097C YGR025WP53216 100 aa0.57□□□□□ -2.32
VPS9YML097C YBR056W-AI2HB52 66 aa0.57□□□□□ -2.32
VPS9YML097C ATP17Q06405 101 aa0.55□□□□□ -2.32
VPS9YML097C YIL046W-AQ3E7Z4 54 aa0.54□□□□□ -2.32
VPS9YML097C TIM12P32830 109 aa0.52□□□□□ -2.33
VPS9YML097C YBL044WP38194 122 aa0.5□□□□□ -2.33
VPS9YML097C LSM2P38203 95 aaKnown RBP0.48□□□□□ -2.33
VPS9YML097C YOR032W-AQ8TGS1 66 aa0.48□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms