RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeastyeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC39YLR440C HOT13P36078 116 aa3.65□□□□□ -1.82
SEC39YLR440C YDR010CQ12426 110 aa3.65□□□□□ -1.83
SEC39YLR440C YIL156W-BQ2V2P4 73 aa3.65□□□□□ -1.83
SEC39YLR440C YPR053CQ6Q5F3 151 aa3.65□□□□□ -1.83
SEC39YLR440C RPS27AP35997 82 aaKnown RBP3.64□□□□□ -1.83
SEC39YLR440C RPS27BP38711 82 aa3.64□□□□□ -1.83
SEC39YLR440C NOP10Q6Q547 58 aaPredicted RBP3.64□□□□□ -1.83
SEC39YLR440C QCR8P08525 94 aa3.64□□□□□ -1.83
SEC39YLR440C RPS30AP0CX33 63 aaKnown RBP3.63□□□□□ -1.83
SEC39YLR440C RPS30BP0CX34 63 aaKnown RBP3.63□□□□□ -1.83
SEC39YLR440C POR2P40478 281 aa3.63□□□□□ -1.83
SEC39YLR440C YJR085CP47131 105 aaKnown RBP3.63□□□□□ -1.83
SEC39YLR440C YMR007WQ03675 126 aa3.63□□□□□ -1.83
SEC39YLR440C BSC4P53841 131 aa3.62□□□□□ -1.83
SEC39YLR440C KRE9P39005 276 aa3.62□□□□□ -1.83
SEC39YLR440C IGD1P43598 195 aa3.62□□□□□ -1.83
SEC39YLR440C YOL166W-AQ8TGJ1 51 aa3.62□□□□□ -1.83
SEC39YLR440C FAS1P07149 2051 aaKnown RBP3.62□□□□□ -1.83
SEC39YLR440C YDL022C-AP0C5L6 82 aa3.61□□□□□ -1.83
SEC39YLR440C YOR032W-AQ8TGS1 66 aa3.61□□□□□ -1.83
SEC39YLR440C YBR027CP38220 110 aa3.59□□□□□ -1.83
SEC39YLR440C API2Q04413 109 aa3.59□□□□□ -1.83
SEC39YLR440C ECM19Q06011 112 aa3.59□□□□□ -1.84
SEC39YLR440C YCL048W-AQ2V2Q2 79 aa3.59□□□□□ -1.84
SEC39YLR440C FIT2Q08906 153 aa3.58□□□□□ -1.84
SEC39YLR440C YLR236CA0A023PZG4 107 aa3.58□□□□□ -1.84
SEC39YLR440C YOR034C-AQ3E735 80 aa3.58□□□□□ -1.84
SEC39YLR440C YDR115WQ04598 105 aa3.57□□□□□ -1.84
SEC39YLR440C YNL042W-BQ3E7Z2 85 aa3.57□□□□□ -1.84
SEC39YLR440C HUB1Q6Q546 73 aa3.57□□□□□ -1.84
SEC39YLR440C YHR032W-AP0C5N6 59 aa3.56□□□□□ -1.84
SEC39YLR440C YCL042WP25572 119 aa3.56□□□□□ -1.84
SEC39YLR440C YSF3P0C074 85 aaPredicted RBP3.55□□□□□ -1.84
SEC39YLR440C CMC4Q3E7A9 73 aa3.55□□□□□ -1.84
SEC39YLR440C YEL014CP39999 101 aa3.55□□□□□ -1.84
SEC39YLR440C MGR2Q02889 113 aa3.55□□□□□ -1.84
SEC39YLR440C RPS11AP0CX47 156 aaKnown RBP3.54□□□□□ -1.84
SEC39YLR440C RPS11BP0CX48 156 aaKnown RBP3.54□□□□□ -1.84
SEC39YLR440C UTP20P35194 2493 aaKnown RBP3.54□□□□□ -1.84
SEC39YLR440C SHU1P38751 150 aa3.53□□□□□ -1.84
SEC39YLR440C YKR032WP36127 104 aa3.53□□□□□ -1.84
SEC39YLR440C YBR219CP38317 127 aa3.53□□□□□ -1.84
SEC39YLR440C YNL190WP53872 204 aa3.53□□□□□ -1.84
SEC39YLR440C YCR001WP25347 104 aa3.52□□□□□ -1.85
SEC39YLR440C YFL067WP43537 175 aa3.52□□□□□ -1.85
SEC39YLR440C DAD4P69851 72 aa3.51□□□□□ -1.85
SEC39YLR440C YMR254CQ04838 102 aa3.51□□□□□ -1.85
SEC39YLR440C ATP17Q06405 101 aa3.5□□□□□ -1.85
SEC39YLR440C YPR195CQ06594 109 aa3.5□□□□□ -1.85
SEC39YLR440C CCW14O13547 238 aa3.5□□□□□ -1.85
SEC39YLR440C YJR107C-AP0CT86 78 aa3.5□□□□□ -1.85
SEC39YLR440C TOS6P48560 102 aa3.5□□□□□ -1.85
SEC39YLR440C CCW12Q12127 133 aa3.5□□□□□ -1.85
SEC39YLR440C COX8P04039 78 aa3.48□□□□□ -1.85
SEC39YLR440C HUA1P40325 198 aa3.48□□□□□ -1.85
SEC39YLR440C RPL33BP41056 107 aaKnown RBP3.48□□□□□ -1.85
SEC39YLR440C RPL38P49167 78 aaKnown RBP3.48□□□□□ -1.85
SEC39YLR440C MRPS12P53732 153 aa3.48□□□□□ -1.85
SEC39YLR440C HUG1Q6Q5K6 68 aa3.48□□□□□ -1.85
SEC39YLR440C YAL067W-AQ8TGK6 75 aa3.48□□□□□ -1.85
SEC39YLR440C TOM7P53507 60 aa3.47□□□□□ -1.85
SEC39YLR440C NCE101Q02820 53 aa3.47□□□□□ -1.85
SEC39YLR440C YNL122CP53921 115 aaPredicted RBP3.46□□□□□ -1.86
SEC39YLR440C YPR108W-AQ3E7B3 70 aa3.46□□□□□ -1.86
SEC39YLR440C YKR073CP36153 106 aa3.45□□□□□ -1.86
SEC39YLR440C YGL014C-AP0C5N1 53 aa3.44□□□□□ -1.86
SEC39YLR440C AQY2P0CD90 149 aa3.44□□□□□ -1.86
SEC39YLR440C YJL027CP47063 138 aaPredicted RBP3.44□□□□□ -1.86
SEC39YLR440C YMR001C-AQ8TGS9 76 aa3.44□□□□□ -1.86
SEC39YLR440C SEC16P48415 2195 aaKnown RBP3.44□□□□□ -1.86
SEC39YLR440C YIL102CP40488 101 aa3.43□□□□□ -1.86
SEC39YLR440C SGF11Q03067 99 aa3.43□□□□□ -1.86
SEC39YLR440C YDR210WQ03482 75 aa3.43□□□□□ -1.86
SEC39YLR440C YLR157W-DP0CE99 70 aa3.43□□□□□ -1.86
SEC39YLR440C ATP18P81450 59 aa3.43□□□□□ -1.86
SEC39YLR440C LCL2Q08045 131 aa3.43□□□□□ -1.86
SEC39YLR440C YOR008C-AQ3E7B9 74 aa3.43□□□□□ -1.86
SEC39YLR440C SDH6Q3E785 79 aa3.42□□□□□ -1.86
SEC39YLR440C BLM10P43583 2143 aa3.41□□□□□ -1.86
SEC39YLR440C YOL085CQ99345 113 aa3.41□□□□□ -1.86
SEC39YLR440C Q0297Q9ZZV8 51 aa3.4□□□□□ -1.86
SEC39YLR440C DYN1P36022 4092 aa3.4□□□□□ -1.87
SEC39YLR440C YGL041C-BQ3E750 60 aa3.4□□□□□ -1.87
SEC39YLR440C YMR122W-AQ3E842 84 aa3.4□□□□□ -1.87
SEC39YLR440C YPR010C-AA5Z2X5 72 aa3.37□□□□□ -1.87
SEC39YLR440C YMR141CP40211 102 aa3.37□□□□□ -1.87
SEC39YLR440C YFR009W-AP0C5M9 85 aa3.37□□□□□ -1.87
SEC39YLR440C RPL33AP05744 107 aaKnown RBP3.36□□□□□ -1.87
SEC39YLR440C YLR122CQ12312 125 aa3.35□□□□□ -1.87
SEC39YLR440C YGL258W-AQ3E740 77 aa3.35□□□□□ -1.87
SEC39YLR440C YOL097W-AQ3E7Y9 61 aa3.34□□□□□ -1.87
SEC39YLR440C YOL013W-AP0C272 63 aaPredicted RBP3.34□□□□□ -1.88
SEC39YLR440C YER084WP40057 128 aa3.33□□□□□ -1.88
SEC39YLR440C SIP18P50263 79 aa3.33□□□□□ -1.88
SEC39YLR440C YBR201C-AQ2V2Q3 67 aa3.33□□□□□ -1.88
SEC39YLR440C YLR342W-AQ3E810 57 aa3.33□□□□□ -1.88
SEC39YLR440C YEL008WP40001 126 aa3.31□□□□□ -1.88
SEC39YLR440C Q0032Q9ZZX7 96 aa3.3□□□□□ -1.88
SEC39YLR440C YBL039W-BP0C268 59 aa3.29□□□□□ -1.88
SEC39YLR440C YJL144WP47009 104 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms