RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C MRX7P53869 86 aa1.51□□□□□ -2.17
ATG17YLR423C MRP17P28778 131 aa1.5□□□□□ -2.17
ATG17YLR423C Q0297Q9ZZV8 51 aa1.49□□□□□ -2.17
ATG17YLR423C MRPL38P35996 138 aaPredicted RBP1.46□□□□□ -2.18
ATG17YLR423C ICY1Q04329 127 aa1.46□□□□□ -2.18
ATG17YLR423C YOR289WQ12012 251 aaPredicted RBP1.46□□□□□ -2.18
ATG17YLR423C YOL164W-AQ3E7A5 60 aa1.46□□□□□ -2.18
ATG17YLR423C YBR292CP38357 123 aa1.45□□□□□ -2.18
ATG17YLR423C RPS11AP0CX47 156 aaKnown RBP1.43□□□□□ -2.18
ATG17YLR423C RPS11BP0CX48 156 aaKnown RBP1.43□□□□□ -2.18
ATG17YLR423C PAU6P0CE90 120 aa1.42□□□□□ -2.18
ATG17YLR423C PAU18P0CE91 120 aa1.42□□□□□ -2.18
ATG17YLR423C EMC5P40540 141 aa1.41□□□□□ -2.18
ATG17YLR423C AIM19P40502 157 aa1.4□□□□□ -2.19
ATG17YLR423C YBL071CP38185 102 aa1.39□□□□□ -2.19
ATG17YLR423C YNR034W-AQ3E841 98 aa1.39□□□□□ -2.19
ATG17YLR423C HMRA1P0CY11 126 aa1.38□□□□□ -2.19
ATG17YLR423C RPS27AP35997 82 aaKnown RBP1.38□□□□□ -2.19
ATG17YLR423C RPS27BP38711 82 aa1.38□□□□□ -2.19
ATG17YLR423C PAU20Q08322 120 aa1.37□□□□□ -2.19
ATG17YLR423C ZEO1Q08245 113 aa1.36□□□□□ -2.19
ATG17YLR423C YFR010W-AP0C5N0 62 aa1.33□□□□□ -2.2
ATG17YLR423C YPL225WQ08971 146 aaKnown RBP1.33□□□□□ -2.2
ATG17YLR423C YOR032W-AQ8TGS1 66 aa1.33□□□□□ -2.2
ATG17YLR423C YGR035W-AQ45U48 73 aa1.32□□□□□ -2.2
ATG17YLR423C RPA12P32529 125 aaKnown RBP1.31□□□□□ -2.2
ATG17YLR423C PAU1P0CE88 120 aa1.3□□□□□ -2.2
ATG17YLR423C PAU14P0CE89 120 aa1.3□□□□□ -2.2
ATG17YLR423C PAU8P0CE92 120 aa1.3□□□□□ -2.2
ATG17YLR423C PAU11P0CE93 120 aa1.3□□□□□ -2.2
ATG17YLR423C PAU13P38725 120 aa1.3□□□□□ -2.2
ATG17YLR423C RSM18P40033 138 aa1.3□□□□□ -2.2
ATG17YLR423C PAU10Q03050 120 aa1.3□□□□□ -2.2
ATG17YLR423C PAU9Q3E770 120 aa1.3□□□□□ -2.2
ATG17YLR423C RRT15Q3E811 62 aa1.3□□□□□ -2.2
ATG17YLR423C MSL1P40567 111 aaPredicted RBP1.28□□□□□ -2.2
ATG17YLR423C NHP10Q03435 203 aa1.28□□□□□ -2.2
ATG17YLR423C SPC1P46965 94 aa1.26□□□□□ -2.21
ATG17YLR423C YNL190WP53872 204 aa1.26□□□□□ -2.21
ATG17YLR423C YHR214C-DP0CX93 97 aa1.25□□□□□ -2.21
ATG17YLR423C PAU4P53427 120 aa1.23□□□□□ -2.21
ATG17YLR423C SNU13P39990 126 aaKnown RBP1.21□□□□□ -2.22
ATG17YLR423C SIP18P50263 79 aa1.2□□□□□ -2.22
ATG17YLR423C SUS1Q6WNK7 96 aa1.19□□□□□ -2.22
ATG17YLR423C RPL39P04650 51 aa1.16□□□□□ -2.22
ATG17YLR423C YNL198CP40166 100 aa1.16□□□□□ -2.22
ATG17YLR423C RPC10P40422 70 aa1.16□□□□□ -2.22
ATG17YLR423C YDR042CQ03205 200 aa1.16□□□□□ -2.22
ATG17YLR423C NCE101Q02820 53 aa1.15□□□□□ -2.23
ATG17YLR423C YDR029WQ12111 104 aa1.15□□□□□ -2.23
ATG17YLR423C PDX3P38075 228 aaKnown RBP1.13□□□□□ -2.23
ATG17YLR423C YNL042W-BQ3E7Z2 85 aa1.12□□□□□ -2.23
ATG17YLR423C RPL38P49167 78 aaKnown RBP1.1□□□□□ -2.23
ATG17YLR423C BSC4P53841 131 aa1.09□□□□□ -2.23
ATG17YLR423C COX7P10174 60 aa1.07□□□□□ -2.24
ATG17YLR423C HOR7Q05827 59 aa1.07□□□□□ -2.24
ATG17YLR423C MHF2Q3E829 80 aa1.07□□□□□ -2.24
ATG17YLR423C YMR105W-AQ8TGS8 64 aa1.06□□□□□ -2.24
ATG17YLR423C YOR343CQ12484 108 aa1.05□□□□□ -2.24
ATG17YLR423C YCR075W-AQ3E830 75 aa1.05□□□□□ -2.24
ATG17YLR423C Q0032Q9ZZX7 96 aa1.05□□□□□ -2.24
ATG17YLR423C ATX1P38636 73 aa1.01□□□□□ -2.25
ATG17YLR423C TIM12P32830 109 aa1□□□□□ -2.25
ATG17YLR423C YBR016WP38216 128 aa1□□□□□ -2.25
ATG17YLR423C NHP2P32495 156 aaPredicted RBP0.99□□□□□ -2.25
ATG17YLR423C YMR082CQ04276 118 aa0.99□□□□□ -2.25
ATG17YLR423C YBR201C-AQ2V2Q3 67 aa0.99□□□□□ -2.25
ATG17YLR423C YCL001W-BQ96VH2 84 aa0.99□□□□□ -2.25
ATG17YLR423C YJR107C-AP0CT86 78 aa0.98□□□□□ -2.25
ATG17YLR423C ECM12O13529 151 aa0.96□□□□□ -2.26
ATG17YLR423C SCP1Q08873 200 aa0.95□□□□□ -2.26
ATG17YLR423C YFR009W-AP0C5M9 85 aa0.94□□□□□ -2.26
ATG17YLR423C SGF11Q03067 99 aa0.94□□□□□ -2.26
ATG17YLR423C YKL018C-AQ3E7A7 99 aa0.94□□□□□ -2.26
ATG17YLR423C TOM6P33448 61 aa0.93□□□□□ -2.26
ATG17YLR423C YOL131WQ08270 108 aa0.93□□□□□ -2.26
ATG17YLR423C YMR122W-AQ3E842 84 aa0.91□□□□□ -2.26
ATG17YLR423C YDR034C-AP0C289 58 aa0.9□□□□□ -2.27
ATG17YLR423C RPS29AP41057 56 aaKnown RBP0.9□□□□□ -2.27
ATG17YLR423C YAL065CO13511 128 aa0.89□□□□□ -2.27
ATG17YLR423C TOM7P53507 60 aa0.89□□□□□ -2.27
ATG17YLR423C YOR011W-AQ3E807 68 aa0.88□□□□□ -2.27
ATG17YLR423C YOR192C-CQ3E736 78 aa0.87□□□□□ -2.27
ATG17YLR423C YMR175W-AQ3E766 64 aa0.86□□□□□ -2.27
ATG17YLR423C YGR025WP53216 100 aa0.85□□□□□ -2.27
ATG17YLR423C FPR2P32472 135 aa0.83□□□□□ -2.28
ATG17YLR423C YLL066W-BQ8TGJ7 56 aa0.83□□□□□ -2.28
ATG17YLR423C ATP18P81450 59 aa0.82□□□□□ -2.28
ATG17YLR423C YKL068W-AQ3E826 78 aa0.81□□□□□ -2.28
ATG17YLR423C SMX2P40204 77 aaKnown RBP0.8□□□□□ -2.28
ATG17YLR423C PAU23Q07987 124 aa0.78□□□□□ -2.28
ATG17YLR423C PAU17Q12370 124 aa0.78□□□□□ -2.28
ATG17YLR423C SDH6Q3E785 79 aa0.78□□□□□ -2.28
ATG17YLR423C YIL134C-AQ45U18 67 aa0.78□□□□□ -2.28
ATG17YLR423C YBR032WP38223 100 aa0.76□□□□□ -2.29
ATG17YLR423C YGL194C-AQ2V2P6 80 aa0.76□□□□□ -2.29
ATG17YLR423C YPR108W-AQ3E7B3 70 aa0.72□□□□□ -2.29
ATG17YLR423C NOP10Q6Q547 58 aaPredicted RBP0.7□□□□□ -2.3
ATG17YLR423C YPR010C-AA5Z2X5 72 aa0.69□□□□□ -2.3
ATG17YLR423C YGL258W-AQ3E740 77 aa0.69□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 70.8 ms