RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CST9	YLR394W	YBR027C	P38220	110 aa		0.99	□□□□□ -2.25
CST9	YLR394W	IRC21	Q04772	201 aa		0.99	□□□□□ -2.25
CST9	YLR394W	YNL277W-A	Q3E7Z0	62 aa		0.99	□□□□□ -2.25
CST9	YLR394W	MRPL44	P19956	98 aa		0.98	□□□□□ -2.25
CST9	YLR394W	YCR050C	P25630	102 aa		0.98	□□□□□ -2.25
CST9	YLR394W	PAU7	P39545	55 aa		0.98	□□□□□ -2.25
CST9	YLR394W	PAU5	P43575	122 aa		0.98	□□□□□ -2.25
CST9	YLR394W	YDR042C	Q03205	200 aa		0.98	□□□□□ -2.25
CST9	YLR394W	NAT5	Q08689	176 aa		0.98	□□□□□ -2.25
CST9	YLR394W	WIP1	Q2V2P8	89 aa		0.98	□□□□□ -2.25
CST9	YLR394W	YOR376W-A	Q3E805	51 aa		0.98	□□□□□ -2.25
CST9	YLR394W	KSH1	Q8TGJ3	72 aa		0.98	□□□□□ -2.25
CST9	YLR394W	PFY1	P07274	126 aa		0.98	□□□□□ -2.25
CST9	YLR394W	FYV5	P25585	152 aa		0.98	□□□□□ -2.25
CST9	YLR394W	YAR029W	P39549	74 aa		0.98	□□□□□ -2.25
CST9	YLR394W	MVB12	P42939	101 aa		0.98	□□□□□ -2.25
CST9	YLR394W	YIL014C-A	Q02598	104 aa		0.98	□□□□□ -2.25
CST9	YLR394W	SOM1	Q05676	74 aa		0.98	□□□□□ -2.25
CST9	YLR394W	CNL1	Q06333	122 aa		0.98	□□□□□ -2.25
CST9	YLR394W	SLO1	Q3E784	85 aa		0.98	□□□□□ -2.25
CST9	YLR394W	YOR008C-A	Q3E7B9	74 aa		0.98	□□□□□ -2.25
CST9	YLR394W	YNR034W-A	Q3E841	98 aa		0.98	□□□□□ -2.25
CST9	YLR394W	YBL039W-B	P0C268	59 aa		0.97	□□□□□ -2.25
CST9	YLR394W	ATG8	P38182	117 aa	RIP-Chip data	0.97	□□□□□ -2.25	not detected
CST9	YLR394W	PHS1	P40857	217 aa		0.97	□□□□□ -2.25
CST9	YLR394W	YJL009W	P47078	108 aa		0.97	□□□□□ -2.25
CST9	YLR394W	HMRA1	P0CY11	126 aa		0.96	□□□□□ -2.26
CST9	YLR394W	HMRA2	P0CY13	119 aa		0.96	□□□□□ -2.26
CST9	YLR394W	FUN14	P18411	198 aa		0.96	□□□□□ -2.26
CST9	YLR394W	SNN1	P48232	102 aa		0.96	□□□□□ -2.26
CST9	YLR394W	DDR2	P89113	61 aa		0.96	□□□□□ -2.26
CST9	YLR394W	MGR2	Q02889	113 aa		0.96	□□□□□ -2.26
CST9	YLR394W	ELC1	Q03071	99 aa		0.96	□□□□□ -2.26
CST9	YLR394W	HAP3	P13434	144 aa		0.95	□□□□□ -2.26
CST9	YLR394W	TOS6	P48560	102 aa		0.95	□□□□□ -2.26
CST9	YLR394W	YKL023C-A	Q2V2P3	75 aa		0.95	□□□□□ -2.26
CST9	YLR394W	VMA9	Q3E7B6	73 aa		0.95	□□□□□ -2.26
CST9	YLR394W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.95	□□□□□ -2.26
CST9	YLR394W	YGR121W-A	Q3E816	71 aa		0.95	□□□□□ -2.26
CST9	YLR394W	YER039C-A	P0CD97	72 aa		0.94	□□□□□ -2.26
CST9	YLR394W	QCR10	P37299	77 aa		0.94	□□□□□ -2.26
CST9	YLR394W	SHU1	P38751	150 aa		0.94	□□□□□ -2.26
CST9	YLR394W	BSC4	P53841	131 aa		0.94	□□□□□ -2.26
CST9	YLR394W	YLL006W-A	Q3E814	58 aa		0.94	□□□□□ -2.26
CST9	YLR394W	YHR213W-B	Q8TGK1	99 aa		0.94	□□□□□ -2.26
CST9	YLR394W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.93	□□□□□ -2.26
CST9	YLR394W	YDL022C-A	P0C5L6	82 aa		0.93	□□□□□ -2.26
CST9	YLR394W	YNL122C	P53921	115 aa	Predicted RBP	0.93	□□□□□ -2.26
CST9	YLR394W	COA6	Q3E846	104 aa		0.93	□□□□□ -2.26
CST9	YLR394W	MRPL11	P36521	249 aa	Predicted RBP	0.92	□□□□□ -2.26
CST9	YLR394W	YHL005C	P38752	130 aa		0.92	□□□□□ -2.26
CST9	YLR394W	HSP10	P38910	106 aa		0.92	□□□□□ -2.26
CST9	YLR394W	AIM11	P87275	137 aa		0.92	□□□□□ -2.26
CST9	YLR394W	APS2	Q00381	147 aa		0.92	□□□□□ -2.26
CST9	YLR394W	SEN15	Q04675	128 aa		0.92	□□□□□ -2.26
CST9	YLR394W	YIR021W-A	Q3E739	70 aa		0.92	□□□□□ -2.26
CST9	YLR394W	YNL042W-B	Q3E7Z2	85 aa		0.92	□□□□□ -2.26
CST9	YLR394W	RPL29	P05747	59 aa	Predicted RBP	0.91	□□□□□ -2.26
CST9	YLR394W	YGL014C-A	P0C5N1	53 aa		0.91	□□□□□ -2.26
CST9	YLR394W	GSP1	P32835	219 aa	Known RBP	0.91	□□□□□ -2.26
CST9	YLR394W	MRPS12	P53732	153 aa		0.91	□□□□□ -2.26
CST9	YLR394W	YNL190W	P53872	204 aa		0.91	□□□□□ -2.26
CST9	YLR394W	YBR230W-A	Q3E762	66 aa		0.91	□□□□□ -2.26
CST9	YLR394W	ERV14	P53173	138 aa		0.9	□□□□□ -2.26
CST9	YLR394W	SAE3	P89114	91 aa		0.9	□□□□□ -2.26
CST9	YLR394W	YMR122C	Q03879	124 aa		0.9	□□□□□ -2.26
CST9	YLR394W	RUB1	Q03919	77 aa		0.9	□□□□□ -2.26
CST9	YLR394W	YMR103C	Q04436	120 aa		0.9	□□□□□ -2.26
CST9	YLR394W	HPA2	Q06592	156 aa		0.9	□□□□□ -2.26
CST9	YLR394W	YJL127C-B	Q3E828	52 aa		0.9	□□□□□ -2.26
CST9	YLR394W	YOR304C-A	O14468	76 aa		0.89	□□□□□ -2.27
CST9	YLR394W	AIM4	P38305	123 aa	Predicted RBP	0.89	□□□□□ -2.27
CST9	YLR394W	VMA21	P41806	77 aa		0.89	□□□□□ -2.27
CST9	YLR394W	ARL3	Q02804	198 aa		0.89	□□□□□ -2.27
CST9	YLR394W	YLR296W	Q05898	108 aa		0.89	□□□□□ -2.27
CST9	YLR394W	YKL044W	P36092	106 aa		0.89	□□□□□ -2.27
CST9	YLR394W	YPL261C	Q08976	102 aa		0.89	□□□□□ -2.27
CST9	YLR394W	RPL36B	O14455	100 aa	Known RBP	0.88	□□□□□ -2.27
CST9	YLR394W	RPL36A	P05745	100 aa	Predicted RBP	0.88	□□□□□ -2.27
CST9	YLR394W	COX7	P10174	60 aa		0.88	□□□□□ -2.27
CST9	YLR394W	SRB6	P32570	121 aa		0.88	□□□□□ -2.27
CST9	YLR394W	HHY1	P39982	102 aa		0.88	□□□□□ -2.27
CST9	YLR394W	YDR210W	Q03482	75 aa		0.88	□□□□□ -2.27
CST9	YLR394W	YOR034C-A	Q3E735	80 aa		0.88	□□□□□ -2.27
CST9	YLR394W	YHR130C	P38834	111 aa		0.87	□□□□□ -2.27
CST9	YLR394W	RPS29A	P41057	56 aa	Known RBP	0.87	□□□□□ -2.27
CST9	YLR394W	YJR128W	P47162	119 aa		0.87	□□□□□ -2.27
CST9	YLR394W	ICY1	Q04329	127 aa		0.87	□□□□□ -2.27
CST9	YLR394W	RSM18	P40033	138 aa		0.86	□□□□□ -2.27
CST9	YLR394W	PAU17	Q12370	124 aa		0.86	□□□□□ -2.27
CST9	YLR394W	RPS29B	P41058	56 aa	Known RBP	0.84	□□□□□ -2.27
CST9	YLR394W	Q0017	Q9ZZX8	53 aa		0.84	□□□□□ -2.27
CST9	YLR394W	YLR157W-D	P0CE99	70 aa		0.83	□□□□□ -2.28
CST9	YLR394W	YER187W	P40102	141 aa		0.83	□□□□□ -2.28
CST9	YLR394W	COX23	P38824	151 aa		0.82	□□□□□ -2.28
CST9	YLR394W	YOL097W-A	Q3E7Y9	61 aa		0.82	□□□□□ -2.28
CST9	YLR394W	TDA2	P40045	126 aa		0.81	□□□□□ -2.28
CST9	YLR394W	PAU23	Q07987	124 aa		0.81	□□□□□ -2.28
CST9	YLR394W	OST5	Q92316	86 aa		0.81	□□□□□ -2.28
CST9	YLR394W	EDC1	P53080	175 aa	Predicted RBP	0.81	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms