RNA–Protein interactions for RNA: YLR219W

MSC3, Transcript of Protein of unknown function, yeast

Gene MSC3, Length 2,187 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSC3	YLR219W	LSM6	Q06406	86 aa	Known RBP	4.44	□□□□□ -1.7
MSC3	YLR219W	YIL102C-A	Q2V2P5	75 aa		4.44	□□□□□ -1.7
MSC3	YLR219W	YOR034C-A	Q3E735	80 aa		4.44	□□□□□ -1.7
MSC3	YLR219W	SPT4	P32914	102 aa	Predicted RBP	4.44	□□□□□ -1.7
MSC3	YLR219W	YNL198C	P40166	100 aa		4.44	□□□□□ -1.7
MSC3	YLR219W	NHP2	P32495	156 aa	Predicted RBP	4.43	□□□□□ -1.7
MSC3	YLR219W	ICY1	Q04329	127 aa		4.43	□□□□□ -1.7
MSC3	YLR219W	YGL193C	P53097	103 aa		4.42	□□□□□ -1.7
MSC3	YLR219W	RAD6	P06104	172 aa		4.41	□□□□□ -1.7
MSC3	YLR219W	YFL065C	P43539	102 aa		4.41	□□□□□ -1.7
MSC3	YLR219W	YPR203W	Q08994	102 aa		4.41	□□□□□ -1.7
MSC3	YLR219W	LCL1	Q02786	101 aa		4.41	□□□□□ -1.7
MSC3	YLR219W	HUR1	P45820	110 aa		4.38	□□□□□ -1.71
MSC3	YLR219W	YLR236C	A0A023PZG4	107 aa		4.38	□□□□□ -1.71
MSC3	YLR219W	RPL26A	P05743	127 aa	Known RBP	4.38	□□□□□ -1.71
MSC3	YLR219W	RPL26B	P53221	127 aa	Known RBP	4.38	□□□□□ -1.71
MSC3	YLR219W	YBR230W-A	Q3E762	66 aa		4.38	□□□□□ -1.71
MSC3	YLR219W	TSC3	Q3E790	80 aa		4.37	□□□□□ -1.71
MSC3	YLR219W	YNL042W-B	Q3E7Z2	85 aa		4.37	□□□□□ -1.71
MSC3	YLR219W	MSA2	P36157	363 aa		4.36	□□□□□ -1.71
MSC3	YLR219W	YGR164W	P53291	111 aa		4.36	□□□□□ -1.71
MSC3	YLR219W	YJL127C-B	Q3E828	52 aa		4.36	□□□□□ -1.71
MSC3	YLR219W	YHR139C-A	O13536	103 aa		4.35	□□□□□ -1.71
MSC3	YLR219W	YLR156W	P0CE96	114 aa		4.35	□□□□□ -1.71
MSC3	YLR219W	YLR159W	P0CE97	114 aa		4.35	□□□□□ -1.71
MSC3	YLR219W	YLR161W	P0CE98	114 aa		4.35	□□□□□ -1.71
MSC3	YLR219W	FYV5	P25585	152 aa		4.35	□□□□□ -1.71
MSC3	YLR219W	MPC3	P53311	146 aa		4.35	□□□□□ -1.71
MSC3	YLR219W	YGL034C	P53186	121 aa		4.34	□□□□□ -1.71
MSC3	YLR219W	KSH1	Q8TGJ3	72 aa		4.34	□□□□□ -1.71
MSC3	YLR219W	DDR2	P89113	61 aa		4.34	□□□□□ -1.72
MSC3	YLR219W	DDR48	P18899	430 aa	Known RBP	4.31	□□□□□ -1.72
MSC3	YLR219W	DSE2	P38844	325 aa		4.3	□□□□□ -1.72
MSC3	YLR219W	YOR376W-A	Q3E805	51 aa		4.3	□□□□□ -1.72
MSC3	YLR219W	YCR085W	P25650	117 aa		4.29	□□□□□ -1.72
MSC3	YLR219W	BSC4	P53841	131 aa		4.29	□□□□□ -1.72
MSC3	YLR219W	EDC2	P40023	145 aa	Predicted RBP	4.29	□□□□□ -1.72
MSC3	YLR219W	BET1	P22804	142 aa		4.28	□□□□□ -1.72
MSC3	YLR219W	YHR007C-A	Q07074	71 aa		4.28	□□□□□ -1.72
MSC3	YLR219W	YJR107C-A	P0CT86	78 aa		4.27	□□□□□ -1.73
MSC3	YLR219W	YCR050C	P25630	102 aa		4.27	□□□□□ -1.73
MSC3	YLR219W	YGR121W-A	Q3E816	71 aa		4.27	□□□□□ -1.73
MSC3	YLR219W	YFL067W	P43537	175 aa		4.27	□□□□□ -1.73
MSC3	YLR219W	ATX1	P38636	73 aa		4.26	□□□□□ -1.73
MSC3	YLR219W	HOT13	P36078	116 aa		4.25	□□□□□ -1.73
MSC3	YLR219W	SPG1	P50088	95 aa		4.25	□□□□□ -1.73
MSC3	YLR219W	YMR230W-A	Q3E7B5	62 aa		4.25	□□□□□ -1.73
MSC3	YLR219W	MIC10	Q96VH5	97 aa		4.25	□□□□□ -1.73
MSC3	YLR219W	YHL018W	P38744	120 aa	Predicted RBP	4.24	□□□□□ -1.73
MSC3	YLR219W	SKI6	P46948	246 aa	Predicted RBP	4.24	□□□□□ -1.73
MSC3	YLR219W	YOR072W	Q08486	104 aa		4.24	□□□□□ -1.73
MSC3	YLR219W	RPL36B	O14455	100 aa	Known RBP	4.24	□□□□□ -1.73
MSC3	YLR219W	YGL149W	P53116	101 aa		4.24	□□□□□ -1.73
MSC3	YLR219W	KRE1	P17260	313 aa		4.23	□□□□□ -1.73
MSC3	YLR219W	RPA12	P32529	125 aa	Known RBP	4.23	□□□□□ -1.73
MSC3	YLR219W	YJR085C	P47131	105 aa	Known RBP	4.23	□□□□□ -1.73
MSC3	YLR219W	YOR268C	Q08734	132 aa		4.23	□□□□□ -1.73
MSC3	YLR219W	YFR032C-B	Q8TGU2	87 aa		4.23	□□□□□ -1.73
MSC3	YLR219W	ATP18	P81450	59 aa		4.23	□□□□□ -1.73
MSC3	YLR219W	YFR009W-A	P0C5M9	85 aa		4.22	□□□□□ -1.73
MSC3	YLR219W	YDR119W-A	Q2V2P9	66 aa		4.22	□□□□□ -1.73
MSC3	YLR219W	TDA8	Q6B2U8	126 aa		4.21	□□□□□ -1.73
MSC3	YLR219W	YBR027C	P38220	110 aa		4.19	□□□□□ -1.74
MSC3	YLR219W	RSM18	P40033	138 aa		4.19	□□□□□ -1.74
MSC3	YLR219W	YDR010C	Q12426	110 aa		4.19	□□□□□ -1.74
MSC3	YLR219W	YDR381C-A	Q3E6R5	114 aa		4.17	□□□□□ -1.74
MSC3	YLR219W	YML100W-A	Q8TGT0	57 aa		4.17	□□□□□ -1.74
MSC3	YLR219W	YOL014W	Q08110	124 aa		4.17	□□□□□ -1.74
MSC3	YLR219W	TOM6	P33448	61 aa		4.16	□□□□□ -1.74
MSC3	YLR219W	EDC1	P53080	175 aa	Predicted RBP	4.16	□□□□□ -1.74
MSC3	YLR219W	EMC6	Q12431	108 aa		4.16	□□□□□ -1.74
MSC3	YLR219W	YHR213W-B	Q8TGK1	99 aa		4.16	□□□□□ -1.74
MSC3	YLR219W	TDA2	P40045	126 aa		4.15	□□□□□ -1.75
MSC3	YLR219W	ICS3	P47034	131 aa		4.15	□□□□□ -1.75
MSC3	YLR219W	YBL008W-A	Q3E821	79 aa		4.15	□□□□□ -1.75
MSC3	YLR219W	YJL197C-A	P0C5P0	93 aa		4.14	□□□□□ -1.75
MSC3	YLR219W	RSM19	P53733	91 aa	Predicted RBP	4.14	□□□□□ -1.75
MSC3	YLR219W	FYV12	Q08559	129 aa		4.13	□□□□□ -1.75
MSC3	YLR219W	YAL063C-A	Q3E791	96 aa		4.13	□□□□□ -1.75
MSC3	YLR219W	YEL045C	P32616	141 aa		4.13	□□□□□ -1.75
MSC3	YLR219W	YHL042W	P38729	150 aa		4.13	□□□□□ -1.75
MSC3	YLR219W	YJL133C-A	Q3E7A3	74 aa		4.13	□□□□□ -1.75
MSC3	YLR219W	YFL041W-A	Q3E817	63 aa		4.12	□□□□□ -1.75
MSC3	YLR219W	ECM19	Q06011	112 aa		4.11	□□□□□ -1.75
MSC3	YLR219W	YLR162W	Q06235	118 aa		4.11	□□□□□ -1.75
MSC3	YLR219W	COX23	P38824	151 aa		4.1	□□□□□ -1.75
MSC3	YLR219W	RPL38	P49167	78 aa	Known RBP	4.09	□□□□□ -1.75
MSC3	YLR219W	YPL038W-A	Q3E7B4	63 aa		4.07	□□□□□ -1.76
MSC3	YLR219W	ATP20	Q12233	115 aa		4.05	□□□□□ -1.76
MSC3	YLR219W	YOL097W-A	Q3E7Y9	61 aa		4.05	□□□□□ -1.76
MSC3	YLR219W	YLR157W-D	P0CE99	70 aa		4.04	□□□□□ -1.76
MSC3	YLR219W	YER187W	P40102	141 aa		4.03	□□□□□ -1.76
MSC3	YLR219W	QCR10	P37299	77 aa		4.03	□□□□□ -1.76
MSC3	YLR219W	YHL005C	P38752	130 aa		4.02	□□□□□ -1.77
MSC3	YLR219W	LIP1	Q03579	150 aa		4.02	□□□□□ -1.77
MSC3	YLR219W	YCR043C	P25361	127 aa		4	□□□□□ -1.77
MSC3	YLR219W	SOM1	Q05676	74 aa		3.99	□□□□□ -1.77
MSC3	YLR219W	YLR285C-A	Q3E771	56 aa		3.99	□□□□□ -1.77
MSC3	YLR219W	HHF1	P02309	103 aa	Known RBP	3.97	□□□□□ -1.77
MSC3	YLR219W	YSY6	P38374	65 aa		3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 52.3 ms