RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	SLO1	Q3E784	85 aa		0.87	□□□□□ -2.27
SMC4	YLR086W	YGR121W-A	Q3E816	71 aa		0.87	□□□□□ -2.27
SMC4	YLR086W	YJR107C-A	P0CT86	78 aa		0.86	□□□□□ -2.27
SMC4	YLR086W	YCR050C	P25630	102 aa		0.86	□□□□□ -2.27
SMC4	YLR086W	ATP18	P81450	59 aa		0.86	□□□□□ -2.27
SMC4	YLR086W	YOR314W	Q12506	109 aa		0.86	□□□□□ -2.27
SMC4	YLR086W	RPL33A	P05744	107 aa	Known RBP	0.86	□□□□□ -2.27
SMC4	YLR086W	YMR103C	Q04436	120 aa		0.86	□□□□□ -2.27
SMC4	YLR086W	YOL097W-A	Q3E7Y9	61 aa		0.86	□□□□□ -2.27
SMC4	YLR086W	RPA12	P32529	125 aa	Known RBP	0.86	□□□□□ -2.27
SMC4	YLR086W	MVB12	P42939	101 aa		0.86	□□□□□ -2.27
SMC4	YLR086W	YDR182W-A	Q3E796	67 aa		0.86	□□□□□ -2.27
SMC4	YLR086W	YOL118C	Q08259	102 aa		0.86	□□□□□ -2.27
SMC4	YLR086W	YPR203W	Q08994	102 aa		0.86	□□□□□ -2.27
SMC4	YLR086W	YKL065W-A	Q2V2P2	73 aa		0.86	□□□□□ -2.27
SMC4	YLR086W	KTI11	Q3E840	82 aa		0.86	□□□□□ -2.27
SMC4	YLR086W	ICS3	P47034	131 aa		0.85	□□□□□ -2.27
SMC4	YLR086W	LIP1	Q03579	150 aa		0.85	□□□□□ -2.27
SMC4	YLR086W	FYV12	Q08559	129 aa		0.85	□□□□□ -2.27
SMC4	YLR086W	YOR011W-A	Q3E807	68 aa		0.85	□□□□□ -2.27
SMC4	YLR086W	YLL006W-A	Q3E814	58 aa		0.85	□□□□□ -2.27
SMC4	YLR086W	YIL134C-A	Q45U18	67 aa		0.85	□□□□□ -2.27
SMC4	YLR086W	KSH1	Q8TGJ3	72 aa		0.85	□□□□□ -2.27
SMC4	YLR086W	Q0017	Q9ZZX8	53 aa		0.85	□□□□□ -2.27
SMC4	YLR086W	COX23	P38824	151 aa		0.85	□□□□□ -2.27
SMC4	YLR086W	YFL051C	P43552	160 aa		0.85	□□□□□ -2.27
SMC4	YLR086W	YDL157C	Q12082	118 aa		0.85	□□□□□ -2.27
SMC4	YLR086W	YJL127C-B	Q3E828	52 aa		0.85	□□□□□ -2.27
SMC4	YLR086W	YIR021W-A	Q3E739	70 aa		0.85	□□□□□ -2.27
SMC4	YLR086W	YML054C-A	Q3E809	52 aa		0.85	□□□□□ -2.27
SMC4	YLR086W	TOM6	P33448	61 aa		0.84	□□□□□ -2.27
SMC4	YLR086W	TAR1	Q8TGM6	124 aa		0.84	□□□□□ -2.27
SMC4	YLR086W	YIL163C	P40448	117 aa		0.84	□□□□□ -2.27
SMC4	YLR086W	SNA2	P56508	79 aa		0.84	□□□□□ -2.27
SMC4	YLR086W	YOR192C-C	Q3E736	78 aa		0.84	□□□□□ -2.27
SMC4	YLR086W	RPS28B	P0C0X0	67 aa	Known RBP	0.84	□□□□□ -2.28
SMC4	YLR086W	LSM2	P38203	95 aa	Known RBP	0.84	□□□□□ -2.28
SMC4	YLR086W	YEL008W	P40001	126 aa		0.84	□□□□□ -2.28
SMC4	YLR086W	COF1	Q03048	143 aa	Known RBP	0.84	□□□□□ -2.28
SMC4	YLR086W	YOR072W	Q08486	104 aa		0.84	□□□□□ -2.28
SMC4	YLR086W	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.84	□□□□□ -2.28
SMC4	YLR086W	YHR212W-A	P0CX91	67 aa		0.84	□□□□□ -2.28
SMC4	YLR086W	EDC1	P53080	175 aa	Predicted RBP	0.84	□□□□□ -2.28
SMC4	YLR086W	LCL2	Q08045	131 aa		0.84	□□□□□ -2.28
SMC4	YLR086W	YDR034W-B	Q6Q5X2	51 aa		0.84	□□□□□ -2.28
SMC4	YLR086W	RPL36B	O14455	100 aa	Known RBP	0.83	□□□□□ -2.28
SMC4	YLR086W	RPL36A	P05745	100 aa	Predicted RBP	0.83	□□□□□ -2.28
SMC4	YLR086W	YHR073W-A	P0C5N7	58 aa		0.83	□□□□□ -2.28
SMC4	YLR086W	TOM7	P53507	60 aa		0.83	□□□□□ -2.28
SMC4	YLR086W	IRC21	Q04772	201 aa		0.83	□□□□□ -2.28
SMC4	YLR086W	SBH1	P52870	82 aa		0.83	□□□□□ -2.28
SMC4	YLR086W	YBR230W-A	Q3E762	66 aa		0.83	□□□□□ -2.28
SMC4	YLR086W	CMC4	Q3E7A9	73 aa		0.83	□□□□□ -2.28
SMC4	YLR086W	YLR255C	O13574	117 aa		0.83	□□□□□ -2.28
SMC4	YLR086W	YGL193C	P53097	103 aa		0.83	□□□□□ -2.28
SMC4	YLR086W	YGR025W	P53216	100 aa		0.83	□□□□□ -2.28
SMC4	YLR086W	YIL014C-A	Q02598	104 aa		0.83	□□□□□ -2.28
SMC4	YLR086W	YPR153W	Q06537	140 aa		0.83	□□□□□ -2.28
SMC4	YLR086W	SDH6	Q3E785	79 aa		0.83	□□□□□ -2.28
SMC4	YLR086W	ACC1	Q00955	2233 aa	Known RBP	0.82	□□□□□ -2.28
SMC4	YLR086W	CYR1	P08678	2026 aa	Known RBP	0.82	□□□□□ -2.28
SMC4	YLR086W	SEN1	Q00416	2231 aa	Known RBP	0.82	□□□□□ -2.28
SMC4	YLR086W	YHL005C	P38752	130 aa		0.82	□□□□□ -2.28
SMC4	YLR086W	BSC4	P53841	131 aa		0.82	□□□□□ -2.28
SMC4	YLR086W	YAL065C	O13511	128 aa		0.82	□□□□□ -2.28
SMC4	YLR086W	YDR034C-A	P0C289	58 aa		0.82	□□□□□ -2.28
SMC4	YLR086W	YDL022C-A	P0C5L6	82 aa		0.82	□□□□□ -2.28
SMC4	YLR086W	CUP1-1	P0CX80	61 aa		0.82	□□□□□ -2.28
SMC4	YLR086W	CUP1-2	P0CX81	61 aa		0.82	□□□□□ -2.28
SMC4	YLR086W	AIM4	P38305	123 aa	Predicted RBP	0.82	□□□□□ -2.28
SMC4	YLR086W	OLI1	P61829	76 aa		0.82	□□□□□ -2.28
SMC4	YLR086W	GAT4	P40569	121 aa		0.81	□□□□□ -2.28
SMC4	YLR086W	YGL149W	P53116	101 aa		0.81	□□□□□ -2.28
SMC4	YLR086W	YGR164W	P53291	111 aa		0.81	□□□□□ -2.28
SMC4	YLR086W	YBR056W-A	I2HB52	66 aa		0.81	□□□□□ -2.28
SMC4	YLR086W	YAL064W	P39711	94 aa		0.81	□□□□□ -2.28
SMC4	YLR086W	OST5	Q92316	86 aa		0.81	□□□□□ -2.28
SMC4	YLR086W	YBR090C	P38253	122 aa		0.81	□□□□□ -2.28
SMC4	YLR086W	MRX7	P53869	86 aa		0.81	□□□□□ -2.28
SMC4	YLR086W	YJL133C-A	Q3E7A3	74 aa		0.81	□□□□□ -2.28
SMC4	YLR086W	TAO3	P40468	2376 aa		0.81	□□□□□ -2.28
SMC4	YLR086W	YCR001W	P25347	104 aa		0.81	□□□□□ -2.28
SMC4	YLR086W	YJL009W	P47078	108 aa		0.81	□□□□□ -2.28
SMC4	YLR086W	RUB1	Q03919	77 aa		0.81	□□□□□ -2.28
SMC4	YLR086W	YPL038W-A	Q3E7B4	63 aa		0.81	□□□□□ -2.28
SMC4	YLR086W	YDR381C-A	Q3E6R5	114 aa		0.8	□□□□□ -2.28
SMC4	YLR086W	MRPS12	P53732	153 aa		0.8	□□□□□ -2.28
SMC4	YLR086W	SEN15	Q04675	128 aa		0.8	□□□□□ -2.28
SMC4	YLR086W	YNL198C	P40166	100 aa		0.79	□□□□□ -2.28
SMC4	YLR086W	YOR316C-A	Q3E806	69 aa		0.79	□□□□□ -2.28
SMC4	YLR086W	YIL102C	P40488	101 aa		0.79	□□□□□ -2.28
SMC4	YLR086W	YNL122C	P53921	115 aa	Predicted RBP	0.79	□□□□□ -2.28
SMC4	YLR086W	YHR213W-B	Q8TGK1	99 aa		0.79	□□□□□ -2.28
SMC4	YLR086W	YAR064W	P39563	99 aa		0.78	□□□□□ -2.28
SMC4	YLR086W	YBR201C-A	Q2V2Q3	67 aa		0.78	□□□□□ -2.28
SMC4	YLR086W	YLR285C-A	Q3E771	56 aa		0.78	□□□□□ -2.28
SMC4	YLR086W	RSM18	P40033	138 aa		0.78	□□□□□ -2.28
SMC4	YLR086W	YER187W	P40102	141 aa		0.78	□□□□□ -2.28
SMC4	YLR086W	ATP17	Q06405	101 aa		0.78	□□□□□ -2.28
SMC4	YLR086W	YIL156W-B	Q2V2P4	73 aa		0.78	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms