RNA–Protein interactions for RNA: YLL039C

UBI4, Transcript of Ubiquitin, yeastyeast

Gene UBI4, Length 1,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBI4YLL039C RPL36BO14455 100 aaKnown RBP3.19□□□□□ -1.9
UBI4YLL039C RPL36AP05745 100 aaPredicted RBP3.19□□□□□ -1.9
UBI4YLL039C YDR246W-AQ3E763 66 aa3.19□□□□□ -1.9
UBI4YLL039C SPT4P32914 102 aaPredicted RBP3.18□□□□□ -1.9
UBI4YLL039C SPC1P46965 94 aa3.18□□□□□ -1.9
UBI4YLL039C PMP3P87284 55 aa3.18□□□□□ -1.9
UBI4YLL039C ATP20Q12233 115 aa3.18□□□□□ -1.9
UBI4YLL039C YLR156WP0CE96 114 aa3.17□□□□□ -1.9
UBI4YLL039C YLR159WP0CE97 114 aa3.17□□□□□ -1.9
UBI4YLL039C YLR161WP0CE98 114 aa3.17□□□□□ -1.9
UBI4YLL039C COX14P39103 70 aa3.17□□□□□ -1.9
UBI4YLL039C PEX22P39718 180 aa3.17□□□□□ -1.9
UBI4YLL039C RSM18P40033 138 aa3.17□□□□□ -1.9
UBI4YLL039C YNL190WP53872 204 aa3.17□□□□□ -1.9
UBI4YLL039C TSC3Q3E790 80 aa3.17□□□□□ -1.9
UBI4YLL039C YHL005CP38752 130 aa3.16□□□□□ -1.9
UBI4YLL039C ERI1P62651 68 aaKnown RBP3.16□□□□□ -1.9
UBI4YLL039C ATP18P81450 59 aa3.16□□□□□ -1.9
UBI4YLL039C YMR122W-AQ3E842 84 aa3.16□□□□□ -1.9
UBI4YLL039C YLL066W-BQ8TGJ7 56 aa3.16□□□□□ -1.9
UBI4YLL039C RPL33AP05744 107 aaKnown RBP3.15□□□□□ -1.91
UBI4YLL039C RPL29P05747 59 aaPredicted RBP3.15□□□□□ -1.91
UBI4YLL039C YEL008WP40001 126 aa3.15□□□□□ -1.91
UBI4YLL039C RPL33BP41056 107 aaKnown RBP3.15□□□□□ -1.91
UBI4YLL039C MPC3P53311 146 aa3.15□□□□□ -1.91
UBI4YLL039C GIS2P53849 153 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91 RIP-Chip
UBI4YLL039C YMR295CQ03559 197 aa3.15□□□□□ -1.91
UBI4YLL039C ICY1Q04329 127 aa3.15□□□□□ -1.91
UBI4YLL039C YLR162WQ06235 118 aa3.15□□□□□ -1.91
UBI4YLL039C YBR209WP38311 105 aa3.14□□□□□ -1.91
UBI4YLL039C TDA2P40045 126 aa3.14□□□□□ -1.91
UBI4YLL039C YDL241WQ07738 123 aa3.14□□□□□ -1.91
UBI4YLL039C TDA8Q6B2U8 126 aa3.14□□□□□ -1.91
UBI4YLL039C RTC6O14464 93 aa3.13□□□□□ -1.91
UBI4YLL039C YPR195CQ06594 109 aa3.13□□□□□ -1.91
UBI4YLL039C YPR010C-AA5Z2X5 72 aa3.12□□□□□ -1.91
UBI4YLL039C ICS3P47034 131 aa3.12□□□□□ -1.91
UBI4YLL039C SPG1P50088 95 aa3.12□□□□□ -1.91
UBI4YLL039C HHF1P02309 103 aaKnown RBP3.11□□□□□ -1.91
UBI4YLL039C RPL26AP05743 127 aaKnown RBP3.11□□□□□ -1.91
UBI4YLL039C YFL019CP43576 117 aa3.11□□□□□ -1.91
UBI4YLL039C YGL088WP53151 121 aa3.11□□□□□ -1.91
UBI4YLL039C RPL26BP53221 127 aaKnown RBP3.11□□□□□ -1.91
UBI4YLL039C YDR115WQ04598 105 aa3.11□□□□□ -1.91
UBI4YLL039C HUB1Q6Q546 73 aa3.11□□□□□ -1.91
UBI4YLL039C RRT15Q3E811 62 aa3.1□□□□□ -1.91
UBI4YLL039C YLL006W-AQ3E814 58 aa3.1□□□□□ -1.91
UBI4YLL039C YGR121W-AQ3E816 71 aa3.1□□□□□ -1.91
UBI4YLL039C MIC10Q96VH5 97 aa3.1□□□□□ -1.91
UBI4YLL039C YFR009W-AP0C5M9 85 aa3.09□□□□□ -1.91
UBI4YLL039C YOR381W-AQ3E804 55 aa3.09□□□□□ -1.91
UBI4YLL039C YLR307C-AQ3E825 87 aa3.09□□□□□ -1.91
UBI4YLL039C NOP10Q6Q547 58 aaPredicted RBP3.09□□□□□ -1.91
UBI4YLL039C YOL166W-AQ8TGJ1 51 aa3.09□□□□□ -1.91
UBI4YLL039C COX23P38824 151 aa3.08□□□□□ -1.92
UBI4YLL039C YBR219CP38317 127 aa3.07□□□□□ -1.92
UBI4YLL039C RPC10P40422 70 aa3.07□□□□□ -1.92
UBI4YLL039C SMD1Q02260 146 aaPredicted RBP3.07□□□□□ -1.92
UBI4YLL039C OST5Q92316 86 aa3.07□□□□□ -1.92
UBI4YLL039C YAR023CD6VPM8 179 aa3.06□□□□□ -1.92
UBI4YLL039C EDC2P40023 145 aaPredicted RBP3.06□□□□□ -1.92
UBI4YLL039C RPL38P49167 78 aaKnown RBP3.06□□□□□ -1.92
UBI4YLL039C YMR122CQ03879 124 aa3.06□□□□□ -1.92
UBI4YLL039C YER188C-AP0C0V2 99 aa3.05□□□□□ -1.92
UBI4YLL039C YBL081WP38180 368 aaKnown RBP3.05□□□□□ -1.92
UBI4YLL039C YAL064WP39711 94 aa3.05□□□□□ -1.92
UBI4YLL039C LCL2Q08045 131 aa3.05□□□□□ -1.92
UBI4YLL039C YOR034C-AQ3E735 80 aa3.05□□□□□ -1.92
UBI4YLL039C YML100W-AQ8TGT0 57 aa3.04□□□□□ -1.92
UBI4YLL039C YDR034C-AP0C289 58 aa3.03□□□□□ -1.92
UBI4YLL039C RPS30AP0CX33 63 aaKnown RBP3.03□□□□□ -1.92
UBI4YLL039C RPS30BP0CX34 63 aaKnown RBP3.03□□□□□ -1.92
UBI4YLL039C YCR043CP25361 127 aa3.03□□□□□ -1.92
UBI4YLL039C FYV5P25585 152 aa3.03□□□□□ -1.92
UBI4YLL039C MVB12P42939 101 aa3.03□□□□□ -1.92
UBI4YLL039C YGL193CP53097 103 aa3.03□□□□□ -1.92
UBI4YLL039C YOR268CQ08734 132 aa3.03□□□□□ -1.92
UBI4YLL039C EDC1P53080 175 aaPredicted RBP3.02□□□□□ -1.93
UBI4YLL039C YBL039W-BP0C268 59 aa3.01□□□□□ -1.93
UBI4YLL039C SNA2P56508 79 aa3.01□□□□□ -1.93
UBI4YLL039C LIP1Q03579 150 aa3.01□□□□□ -1.93
UBI4YLL039C ECM19Q06011 112 aa3□□□□□ -1.93
UBI4YLL039C YPR153WQ06537 140 aa2.99□□□□□ -1.93
UBI4YLL039C SDH6Q3E785 79 aa2.99□□□□□ -1.93
UBI4YLL039C YHR213W-BQ8TGK1 99 aa2.99□□□□□ -1.93
UBI4YLL039C YOL013W-AP0C272 63 aaPredicted RBP2.98□□□□□ -1.93
UBI4YLL039C AQY2P0CD90 149 aa2.98□□□□□ -1.93
UBI4YLL039C YNL042W-BQ3E7Z2 85 aa2.98□□□□□ -1.93
UBI4YLL039C YJL127C-BQ3E828 52 aa2.98□□□□□ -1.93
UBI4YLL039C YEL045CP32616 141 aa2.97□□□□□ -1.93
UBI4YLL039C YGL034CP53186 121 aa2.97□□□□□ -1.93
UBI4YLL039C YBR230W-AQ3E762 66 aa2.97□□□□□ -1.93
UBI4YLL039C YCR095W-AQ3E787 52 aa2.97□□□□□ -1.93
UBI4YLL039C YJL133C-AQ3E7A3 74 aa2.97□□□□□ -1.93
UBI4YLL039C DDR2P89113 61 aa2.96□□□□□ -1.94
UBI4YLL039C LCL1Q02786 101 aa2.96□□□□□ -1.94
UBI4YLL039C YGL041C-BQ3E750 60 aa2.96□□□□□ -1.94
UBI4YLL039C YMR001C-AQ8TGS9 76 aa2.96□□□□□ -1.94
UBI4YLL039C YHR125WP38831 101 aa2.95□□□□□ -1.94
UBI4YLL039C YIL102CP40488 101 aa2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms