RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W YBR201C-AQ2V2Q3 67 aa0.96□□□□□ -2.26
CTK1YKL139W COX7P10174 60 aa0.95□□□□□ -2.26
CTK1YKL139W RPL38P49167 78 aaKnown RBP0.94□□□□□ -2.26
CTK1YKL139W YBR056W-AI2HB52 66 aa0.93□□□□□ -2.26
CTK1YKL139W PDX3P38075 228 aaKnown RBP0.93□□□□□ -2.26
CTK1YKL139W NUP188P52593 1655 aaKnown RBP0.92□□□□□ -2.26
CTK1YKL139W YMR122W-AQ3E842 84 aa0.92□□□□□ -2.26
CTK1YKL139W YAL065CO13511 128 aa0.91□□□□□ -2.26
CTK1YKL139W YJR107C-AP0CT86 78 aa0.91□□□□□ -2.26
CTK1YKL139W TY1B-DR5P0C2I2 1755 aa0.91□□□□□ -2.26
CTK1YKL139W TY1B-DR6P0C2I3 1755 aa0.91□□□□□ -2.26
CTK1YKL139W TY1B-LR2P0C2I5 1755 aa0.91□□□□□ -2.26
CTK1YKL139W TY1B-LR3P0C2I6 1755 aaKnown RBP0.91□□□□□ -2.26
CTK1YKL139W TY1B-PR1P0C2I9 1755 aaKnown RBP0.91□□□□□ -2.26
CTK1YKL139W TY1B-PR2P0C2J0 1756 aa0.91□□□□□ -2.26
CTK1YKL139W TY1B-PR3P0C2J1 1755 aaKnown RBP0.91□□□□□ -2.26
CTK1YKL139W TY2B-LR1P0C2J3 1770 aa0.91□□□□□ -2.26
CTK1YKL139W TY2B-FP0CX63 1770 aa0.91□□□□□ -2.26
CTK1YKL139W TY2B-GR2P0CX64 1770 aa0.91□□□□□ -2.26
CTK1YKL139W TY2B-CP25384 1770 aa0.91□□□□□ -2.26
CTK1YKL139W TY1B-JR1P47098 1755 aa0.91□□□□□ -2.26
CTK1YKL139W TY1B-ML2Q03434 1755 aaKnown RBP0.91□□□□□ -2.26
CTK1YKL139W TY2B-DR2Q03494 1770 aa0.91□□□□□ -2.26
CTK1YKL139W TY1B-ER1Q03612 1755 aa0.91□□□□□ -2.26
CTK1YKL139W TY1B-DR1Q03855 1755 aa0.91□□□□□ -2.26
CTK1YKL139W TY1B-ML1Q04711 1755 aaKnown RBP0.91□□□□□ -2.26
CTK1YKL139W TY2B-DR3Q07791 1770 aaKnown RBP0.91□□□□□ -2.26
CTK1YKL139W TY2B-OR1Q12113 1770 aa0.91□□□□□ -2.26
CTK1YKL139W TY1B-GR2Q12269 1755 aa0.91□□□□□ -2.26
CTK1YKL139W TY1B-OLQ12273 1755 aa0.91□□□□□ -2.26
CTK1YKL139W TY1B-PLQ12414 1755 aaKnown RBP0.91□□□□□ -2.26
CTK1YKL139W TY2B-DR1Q12472 1770 aa0.91□□□□□ -2.26
CTK1YKL139W TY2B-OR2Q12501 1770 aa0.91□□□□□ -2.26
CTK1YKL139W FPR2P32472 135 aa0.91□□□□□ -2.26
CTK1YKL139W PAU23Q07987 124 aa0.91□□□□□ -2.26
CTK1YKL139W PAU17Q12370 124 aa0.91□□□□□ -2.26
CTK1YKL139W YHR214C-DP0CX93 97 aa0.89□□□□□ -2.27
CTK1YKL139W YOR343CQ12484 108 aa0.89□□□□□ -2.27
CTK1YKL139W TOM6P33448 61 aa0.88□□□□□ -2.27
CTK1YKL139W MLP2P40457 1679 aa0.88□□□□□ -2.27
CTK1YKL139W CWP2P43497 92 aa0.87□□□□□ -2.27
CTK1YKL139W YBR016WP38216 128 aa0.86□□□□□ -2.27
CTK1YKL139W ATP18P81450 59 aa0.85□□□□□ -2.27
CTK1YKL139W NOP10Q6Q547 58 aaPredicted RBP0.85□□□□□ -2.27
CTK1YKL139W TY1B-JR2P47100 1755 aaKnown RBP0.84□□□□□ -2.28
CTK1YKL139W TY1B-ER2Q03619 1755 aa0.84□□□□□ -2.28
CTK1YKL139W TY1B-MR1Q04214 1755 aa0.84□□□□□ -2.28
CTK1YKL139W TY1B-MR2Q04670 1755 aaKnown RBP0.84□□□□□ -2.28
CTK1YKL139W TY1B-LR1Q12088 1755 aaKnown RBP0.84□□□□□ -2.28
CTK1YKL139W TY1B-NL1Q12112 1755 aa0.84□□□□□ -2.28
CTK1YKL139W TY1B-GR1Q12141 1755 aa0.84□□□□□ -2.28
CTK1YKL139W TY2B-BQ12491 1770 aa0.84□□□□□ -2.28
CTK1YKL139W YCR085WP25650 117 aa0.83□□□□□ -2.28
CTK1YKL139W POC4Q12245 148 aaPredicted RBP0.83□□□□□ -2.28
CTK1YKL139W RRP5Q05022 1729 aaKnown RBP0.83□□□□□ -2.28
CTK1YKL139W YFR009W-AP0C5M9 85 aa0.83□□□□□ -2.28
CTK1YKL139W APC1P53886 1748 aa0.83□□□□□ -2.28
CTK1YKL139W YIL156W-BQ2V2P4 73 aa0.81□□□□□ -2.28
CTK1YKL139W SDH6Q3E785 79 aa0.81□□□□□ -2.28
CTK1YKL139W FIG2P25653 1609 aa0.81□□□□□ -2.28
CTK1YKL139W YPR145C-AQ2V2P0 78 aa0.79□□□□□ -2.28
CTK1YKL139W YOR105WQ08504 108 aa0.79□□□□□ -2.28
CTK1YKL139W YKL068W-AQ3E826 78 aa0.79□□□□□ -2.28
CTK1YKL139W ECM29P38737 1868 aa0.78□□□□□ -2.29
CTK1YKL139W FKS3Q04952 1785 aa0.77□□□□□ -2.29
CTK1YKL139W YIL134C-AQ45U18 67 aa0.76□□□□□ -2.29
CTK1YKL139W FLO1P32768 1537 aa0.75□□□□□ -2.29
CTK1YKL139W ATX1P38636 73 aa0.74□□□□□ -2.29
CTK1YKL139W YKL065W-AQ2V2P2 73 aa0.74□□□□□ -2.29
CTK1YKL139W TY1B-DR3Q99231 1755 aa0.74□□□□□ -2.29
CTK1YKL139W YOR314WQ12506 109 aa0.74□□□□□ -2.29
CTK1YKL139W SGF11Q03067 99 aa0.72□□□□□ -2.29
CTK1YKL139W YPR108W-AQ3E7B3 70 aa0.72□□□□□ -2.29
CTK1YKL139W YOL097W-AQ3E7Y9 61 aa0.72□□□□□ -2.29
CTK1YKL139W PDR12Q02785 1511 aa0.72□□□□□ -2.29
CTK1YKL139W YDR381C-AQ3E6R5 114 aa0.71□□□□□ -2.3
CTK1YKL139W MOT1P32333 1867 aa0.71□□□□□ -2.3
CTK1YKL139W UTP10P42945 1769 aaKnown RBP0.71□□□□□ -2.3
CTK1YKL139W STT4P37297 1900 aa0.71□□□□□ -2.3
CTK1YKL139W HKR1P41809 1802 aa0.7□□□□□ -2.3
CTK1YKL139W YDL022C-AP0C5L6 82 aa0.68□□□□□ -2.3
CTK1YKL139W YBR032WP38223 100 aa0.67□□□□□ -2.3
CTK1YKL139W EDC1P53080 175 aaPredicted RBP0.66□□□□□ -2.3
CTK1YKL139W YDR524C-BQ3E6R4 66 aa0.65□□□□□ -2.31
CTK1YKL139W SWM2P40342 146 aa0.64□□□□□ -2.31
CTK1YKL139W YGR121W-AQ3E816 71 aa0.64□□□□□ -2.31
CTK1YKL139W MLP1Q02455 1875 aaKnown RBP0.62□□□□□ -2.31
CTK1YKL139W QCR9P22289 66 aa0.62□□□□□ -2.31
CTK1YKL139W YDR119W-AQ2V2P9 66 aa0.6□□□□□ -2.31
CTK1YKL139W PMD1P32634 1753 aa0.6□□□□□ -2.31
CTK1YKL139W YIL046W-AQ3E7Z4 54 aa0.59□□□□□ -2.31
CTK1YKL139W YGR025WP53216 100 aa0.58□□□□□ -2.32
CTK1YKL139W BPH1P25356 2167 aa0.57□□□□□ -2.32
CTK1YKL139W YGR035W-AQ45U48 73 aa0.57□□□□□ -2.32
CTK1YKL139W TIM12P32830 109 aa0.53□□□□□ -2.32
CTK1YKL139W ATP17Q06405 101 aa0.53□□□□□ -2.32
CTK1YKL139W YBL044WP38194 122 aa0.53□□□□□ -2.33
CTK1YKL139W YHR213W-AQ8TGT4 77 aa0.53□□□□□ -2.33
CTK1YKL139W YCR108CQ3E819 63 aa0.51□□□□□ -2.33
CTK1YKL139W YOR032W-AQ8TGS1 66 aa0.49□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms