RNA–Protein interactions for RNA: YKL085W

MDH1, Transcript of Mitochondrial malate dehydrogenase, yeastyeast

Gene MDH1, Length 1,005 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH1YKL085W RPA12P32529 125 aaKnown RBP3.88□□□□□ -1.79
MDH1YKL085W MVB12P42939 101 aa3.88□□□□□ -1.79
MDH1YKL085W YBL039W-BP0C268 59 aa3.87□□□□□ -1.79
MDH1YKL085W KNH1P50112 268 aa3.87□□□□□ -1.79
MDH1YKL085W ABF2Q02486 183 aa3.87□□□□□ -1.79
MDH1YKL085W EDC2P40023 145 aaPredicted RBP3.86□□□□□ -1.79
MDH1YKL085W INO4P13902 151 aa3.85□□□□□ -1.79
MDH1YKL085W YLL006W-AQ3E814 58 aa3.85□□□□□ -1.79
MDH1YKL085W RPL29P05747 59 aaPredicted RBP3.84□□□□□ -1.79
MDH1YKL085W DSE2P38844 325 aa3.84□□□□□ -1.79
MDH1YKL085W YAL063C-AQ3E791 96 aa3.84□□□□□ -1.79
MDH1YKL085W KTI11Q3E840 82 aa3.84□□□□□ -1.79
MDH1YKL085W ISD11Q6Q560 94 aa3.83□□□□□ -1.8
MDH1YKL085W YLR236CA0A023PZG4 107 aa3.82□□□□□ -1.8
MDH1YKL085W MSA2P36157 363 aa3.82□□□□□ -1.8
MDH1YKL085W SKI6P46948 246 aaPredicted RBP3.82□□□□□ -1.8
MDH1YKL085W RPL26AP05743 127 aaKnown RBP3.81□□□□□ -1.8
MDH1YKL085W PBI2P0CT04 75 aaKnown RBP3.81□□□□□ -1.8
MDH1YKL085W YFL065CP43539 102 aa3.81□□□□□ -1.8
MDH1YKL085W RPL26BP53221 127 aaKnown RBP3.81□□□□□ -1.8
MDH1YKL085W ICY1Q04329 127 aa3.81□□□□□ -1.8
MDH1YKL085W YPR203WQ08994 102 aa3.81□□□□□ -1.8
MDH1YKL085W YER039C-AP0CD97 72 aa3.8□□□□□ -1.8
MDH1YKL085W KRE1P17260 313 aa3.8□□□□□ -1.8
MDH1YKL085W SPG1P50088 95 aa3.8□□□□□ -1.8
MDH1YKL085W IRC21Q04772 201 aa3.8□□□□□ -1.8
MDH1YKL085W YMR230W-AQ3E7B5 62 aa3.8□□□□□ -1.8
MDH1YKL085W YFL041W-AQ3E817 63 aa3.8□□□□□ -1.8
MDH1YKL085W YJR107C-AP0CT86 78 aa3.79□□□□□ -1.8
MDH1YKL085W YGL034CP53186 121 aa3.79□□□□□ -1.8
MDH1YKL085W YDR381C-AQ3E6R5 114 aa3.78□□□□□ -1.8
MDH1YKL085W YGR121W-AQ3E816 71 aa3.78□□□□□ -1.8
MDH1YKL085W KSH1Q8TGJ3 72 aa3.78□□□□□ -1.8
MDH1YKL085W SFT1P43682 97 aa3.77□□□□□ -1.81
MDH1YKL085W EMC6Q12431 108 aa3.77□□□□□ -1.81
MDH1YKL085W TSC3Q3E790 80 aa3.77□□□□□ -1.81
MDH1YKL085W YBL008W-AQ3E821 79 aa3.77□□□□□ -1.81
MDH1YKL085W RPL37BP51402 88 aaKnown RBP3.75□□□□□ -1.81
MDH1YKL085W DDR2P89113 61 aa3.75□□□□□ -1.81
MDH1YKL085W ECM19Q06011 112 aa3.75□□□□□ -1.81
MDH1YKL085W YOR034C-AQ3E735 80 aa3.75□□□□□ -1.81
MDH1YKL085W YAL067W-AQ8TGK6 75 aa3.75□□□□□ -1.81
MDH1YKL085W YHR139C-AO13536 103 aa3.74□□□□□ -1.81
MDH1YKL085W YHL042WP38729 150 aa3.74□□□□□ -1.81
MDH1YKL085W RSM19P53733 91 aaPredicted RBP3.74□□□□□ -1.81
MDH1YKL085W ATP18P81450 59 aa3.74□□□□□ -1.81
MDH1YKL085W FYV5P25585 152 aa3.73□□□□□ -1.81
MDH1YKL085W MPC3P53311 146 aa3.73□□□□□ -1.81
MDH1YKL085W SHH4Q06236 168 aa3.73□□□□□ -1.81
MDH1YKL085W RAD6P06104 172 aa3.71□□□□□ -1.82
MDH1YKL085W YSY6P38374 65 aa3.71□□□□□ -1.82
MDH1YKL085W COF1Q03048 143 aaKnown RBP3.71□□□□□ -1.82
MDH1YKL085W YNL042W-BQ3E7Z2 85 aa3.71□□□□□ -1.82
MDH1YKL085W YBR230W-AQ3E762 66 aa3.7□□□□□ -1.82
MDH1YKL085W YJL127C-BQ3E828 52 aa3.7□□□□□ -1.82
MDH1YKL085W YGR039WP53225 103 aa3.69□□□□□ -1.82
MDH1YKL085W TDA2P40045 126 aa3.68□□□□□ -1.82
MDH1YKL085W YNL184CP53876 108 aa3.68□□□□□ -1.82
MDH1YKL085W YOR304C-AO14468 76 aa3.67□□□□□ -1.82
MDH1YKL085W YFR009W-AP0C5M9 85 aa3.67□□□□□ -1.82
MDH1YKL085W BET1P22804 142 aa3.67□□□□□ -1.82
MDH1YKL085W YBR027CP38220 110 aa3.66□□□□□ -1.82
MDH1YKL085W BSC4P53841 131 aa3.66□□□□□ -1.82
MDH1YKL085W YDR119W-AQ2V2P9 66 aa3.66□□□□□ -1.82
MDH1YKL085W YLR285C-AQ3E771 56 aa3.66□□□□□ -1.82
MDH1YKL085W YPL038W-AQ3E7B4 63 aa3.66□□□□□ -1.82
MDH1YKL085W RPL38P49167 78 aaKnown RBP3.64□□□□□ -1.83
MDH1YKL085W COX23P38824 151 aa3.63□□□□□ -1.83
MDH1YKL085W ICS3P47034 131 aa3.63□□□□□ -1.83
MDH1YKL085W YHR007C-AQ07074 71 aa3.63□□□□□ -1.83
MDH1YKL085W ATP20Q12233 115 aa3.63□□□□□ -1.83
MDH1YKL085W RPL36BO14455 100 aaKnown RBP3.62□□□□□ -1.83
MDH1YKL085W TOM6P33448 61 aa3.62□□□□□ -1.83
MDH1YKL085W YHL018WP38744 120 aaPredicted RBP3.62□□□□□ -1.83
MDH1YKL085W YEL045CP32616 141 aa3.61□□□□□ -1.83
MDH1YKL085W RSM18P40033 138 aa3.61□□□□□ -1.83
MDH1YKL085W YOR072WQ08486 104 aa3.61□□□□□ -1.83
MDH1YKL085W TDA8Q6B2U8 126 aa3.61□□□□□ -1.83
MDH1YKL085W YHR213W-BQ8TGK1 99 aa3.61□□□□□ -1.83
MDH1YKL085W YCR050CP25630 102 aa3.6□□□□□ -1.83
MDH1YKL085W EDC1P53080 175 aaPredicted RBP3.6□□□□□ -1.83
MDH1YKL085W YIR021W-AQ3E739 70 aa3.6□□□□□ -1.83
MDH1YKL085W RPS28BP0C0X0 67 aaKnown RBP3.59□□□□□ -1.83
MDH1YKL085W YJL133C-AQ3E7A3 74 aa3.59□□□□□ -1.83
MDH1YKL085W RPS28AQ3E7X9 67 aaPredicted RBP3.59□□□□□ -1.83
MDH1YKL085W YHL005CP38752 130 aa3.58□□□□□ -1.84
MDH1YKL085W YOR314WQ12506 109 aa3.58□□□□□ -1.84
MDH1YKL085W YNL122CP53921 115 aaPredicted RBP3.57□□□□□ -1.84
MDH1YKL085W YER187WP40102 141 aa3.55□□□□□ -1.84
MDH1YKL085W YFR032C-BQ8TGU2 87 aa3.55□□□□□ -1.84
MDH1YKL085W YLR162WQ06235 118 aa3.54□□□□□ -1.84
MDH1YKL085W YOL014WQ08110 124 aa3.53□□□□□ -1.84
MDH1YKL085W AIM4P38305 123 aaPredicted RBP3.52□□□□□ -1.85
MDH1YKL085W YDR182W-AQ3E796 67 aa3.52□□□□□ -1.85
MDH1YKL085W MIC10Q96VH5 97 aa3.52□□□□□ -1.85
MDH1YKL085W YLR157W-DP0CE99 70 aa3.5□□□□□ -1.85
MDH1YKL085W YDR246W-AQ3E763 66 aa3.5□□□□□ -1.85
MDH1YKL085W RPL36AP05745 100 aaPredicted RBP3.49□□□□□ -1.85
MDH1YKL085W COX7P10174 60 aa3.49□□□□□ -1.85
MDH1YKL085W YHR125WP38831 101 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms