RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C DAD4P69851 72 aa2.28□□□□□ -2.04
YIR040CYIR040C YMR007WQ03675 126 aa2.28□□□□□ -2.04
YIR040CYIR040C FIT2Q08906 153 aa2.28□□□□□ -2.04
YIR040CYIR040C YNL042W-BQ3E7Z2 85 aa2.28□□□□□ -2.04
YIR040CYIR040C RPS11AP0CX47 156 aaKnown RBP2.27□□□□□ -2.05
YIR040CYIR040C RPS11BP0CX48 156 aaKnown RBP2.27□□□□□ -2.05
YIR040CYIR040C YJR107C-AP0CT86 78 aa2.26□□□□□ -2.05
YIR040CYIR040C SHU1P38751 150 aa2.26□□□□□ -2.05
YIR040CYIR040C YPR195CQ06594 109 aa2.26□□□□□ -2.05
YIR040CYIR040C YAL067W-AQ8TGK6 75 aa2.26□□□□□ -2.05
YIR040CYIR040C COX8P04039 78 aa2.25□□□□□ -2.05
YIR040CYIR040C YSF3P0C074 85 aaPredicted RBP2.25□□□□□ -2.05
YIR040CYIR040C YNL122CP53921 115 aaPredicted RBP2.25□□□□□ -2.05
YIR040CYIR040C YGL041C-BQ3E750 60 aa2.25□□□□□ -2.05
YIR040CYIR040C YOL097W-AQ3E7Y9 61 aa2.25□□□□□ -2.05
YIR040CYIR040C CMC4Q3E7A9 73 aa2.24□□□□□ -2.05
YIR040CYIR040C YOR032W-AQ8TGS1 66 aa2.24□□□□□ -2.05
YIR040CYIR040C AQY2P0CD90 149 aa2.23□□□□□ -2.05
YIR040CYIR040C YHR007C-AQ07074 71 aa2.23□□□□□ -2.05
YIR040CYIR040C SDH6Q3E785 79 aa2.23□□□□□ -2.05
YIR040CYIR040C YPR108W-AQ3E7B3 70 aa2.23□□□□□ -2.05
YIR040CYIR040C YOR008C-AQ3E7B9 74 aa2.23□□□□□ -2.05
YIR040CYIR040C YMR001C-AQ8TGS9 76 aa2.23□□□□□ -2.05
YIR040CYIR040C BPH1P25356 2167 aa2.22□□□□□ -2.05
YIR040CYIR040C YGL014C-AP0C5N1 53 aa2.22□□□□□ -2.05
YIR040CYIR040C YMR141CP40211 102 aa2.22□□□□□ -2.05
YIR040CYIR040C YOR034C-AQ3E735 80 aa2.22□□□□□ -2.05
YIR040CYIR040C MRPS12P53732 153 aa2.21□□□□□ -2.06
YIR040CYIR040C YNL190WP53872 204 aa2.21□□□□□ -2.06
YIR040CYIR040C ATP18P81450 59 aa2.21□□□□□ -2.06
YIR040CYIR040C VAM10Q08474 114 aa2.21□□□□□ -2.06
YIR040CYIR040C CCW12Q12127 133 aa2.21□□□□□ -2.06
YIR040CYIR040C HKR1P41809 1802 aa2.2□□□□□ -2.06
YIR040CYIR040C YLR157W-DP0CE99 70 aa2.2□□□□□ -2.06
YIR040CYIR040C SGF11Q03067 99 aa2.2□□□□□ -2.06
YIR040CYIR040C YGL258W-AQ3E740 77 aa2.2□□□□□ -2.06
YIR040CYIR040C HUG1Q6Q5K6 68 aa2.2□□□□□ -2.06
YIR040CYIR040C RPL33AP05744 107 aaKnown RBP2.19□□□□□ -2.06
YIR040CYIR040C FPR1P20081 114 aaKnown RBP2.19□□□□□ -2.06
YIR040CYIR040C RPL38P49167 78 aaKnown RBP2.19□□□□□ -2.06
YIR040CYIR040C YDR210WQ03482 75 aa2.19□□□□□ -2.06
YIR040CYIR040C FLO1P32768 1537 aa2.18□□□□□ -2.06
YIR040CYIR040C TOM7P53507 60 aa2.18□□□□□ -2.06
YIR040CYIR040C LCL2Q08045 131 aa2.18□□□□□ -2.06
YIR040CYIR040C YLR342W-AQ3E810 57 aa2.18□□□□□ -2.06
YIR040CYIR040C YMR122W-AQ3E842 84 aa2.18□□□□□ -2.06
YIR040CYIR040C STT4P37297 1900 aa2.18□□□□□ -2.06
YIR040CYIR040C YOL013W-AP0C272 63 aaPredicted RBP2.17□□□□□ -2.06
YIR040CYIR040C YPR010C-AA5Z2X5 72 aa2.16□□□□□ -2.06
YIR040CYIR040C YIL102CP40488 101 aa2.16□□□□□ -2.06
YIR040CYIR040C YJL027CP47063 138 aaPredicted RBP2.16□□□□□ -2.06
YIR040CYIR040C CDC39P25655 2108 aaKnown RBP2.15□□□□□ -2.06
YIR040CYIR040C YFR009W-AP0C5M9 85 aa2.15□□□□□ -2.07
YIR040CYIR040C YER084WP40057 128 aa2.15□□□□□ -2.07
YIR040CYIR040C YJL144WP47009 104 aa2.15□□□□□ -2.07
YIR040CYIR040C YGR240C-AQ3E786 66 aa2.15□□□□□ -2.07
YIR040CYIR040C YOR011W-AQ3E807 68 aa2.15□□□□□ -2.07
YIR040CYIR040C YOL085CQ99345 113 aa2.15□□□□□ -2.07
YIR040CYIR040C FIG2P25653 1609 aa2.14□□□□□ -2.07
YIR040CYIR040C YEL008WP40001 126 aa2.14□□□□□ -2.07
YIR040CYIR040C YGR025WP53216 100 aa2.14□□□□□ -2.07
YIR040CYIR040C YDR114CQ04597 100 aa2.14□□□□□ -2.07
YIR040CYIR040C YLR255CO13574 117 aa2.13□□□□□ -2.07
YIR040CYIR040C YBL039W-BP0C268 59 aa2.13□□□□□ -2.07
YIR040CYIR040C YBR201C-AQ2V2Q3 67 aa2.13□□□□□ -2.07
YIR040CYIR040C YLR307C-AQ3E825 87 aa2.13□□□□□ -2.07
YIR040CYIR040C BRR2P32639 2163 aaKnown RBP2.12□□□□□ -2.07
YIR040CYIR040C HUA1P40325 198 aa2.12□□□□□ -2.07
YIR040CYIR040C YJR146WP47174 117 aa2.12□□□□□ -2.07
YIR040CYIR040C YBR230W-AQ3E762 66 aa2.12□□□□□ -2.07
YIR040CYIR040C YIL086CP40503 102 aa2.11□□□□□ -2.07
YIR040CYIR040C YJL009WP47078 108 aa2.11□□□□□ -2.07
YIR040CYIR040C YDL012CQ12489 107 aa2.11□□□□□ -2.07
YIR040CYIR040C COX7P10174 60 aa2.1□□□□□ -2.07
YIR040CYIR040C YBR200W-AQ3E755 54 aa2.09□□□□□ -2.07
YIR040CYIR040C Q0032Q9ZZX7 96 aa2.09□□□□□ -2.07
YIR040CYIR040C FAS1P07149 2051 aaKnown RBP2.07□□□□□ -2.08
YIR040CYIR040C MVB12P42939 101 aa2.07□□□□□ -2.08
YIR040CYIR040C TAR1Q8TGM6 124 aa2.07□□□□□ -2.08
YIR040CYIR040C RPL29P05747 59 aaPredicted RBP2.06□□□□□ -2.08
YIR040CYIR040C YHR213W-BQ8TGK1 99 aa2.06□□□□□ -2.08
YIR040CYIR040C AUA1P32450 94 aa2.05□□□□□ -2.08
YIR040CYIR040C SIP18P50263 79 aa2.05□□□□□ -2.08
YIR040CYIR040C YLL006W-AQ3E814 58 aa2.05□□□□□ -2.08
YIR040CYIR040C RDS3Q06835 107 aaPredicted RBP2.04□□□□□ -2.08
YIR040CYIR040C YJL133C-AQ3E7A3 74 aa2.04□□□□□ -2.08
YIR040CYIR040C YOR394C-AQ8TGJ0 55 aa2.04□□□□□ -2.08
YIR040CYIR040C OLI1P61829 76 aa2.03□□□□□ -2.08
YIR040CYIR040C NCE101Q02820 53 aa2.02□□□□□ -2.09
YIR040CYIR040C YOR072WQ08486 104 aa2.02□□□□□ -2.09
YIR040CYIR040C YCL042WP25572 119 aa2.01□□□□□ -2.09
YIR040CYIR040C YAR064WP39563 99 aa2.01□□□□□ -2.09
YIR040CYIR040C DDR2P89113 61 aa2.01□□□□□ -2.09
YIR040CYIR040C LCL1Q02786 101 aa2□□□□□ -2.09
YIR040CYIR040C BLM10P43583 2143 aa1.99□□□□□ -2.09
YIR040CYIR040C ACC1Q00955 2233 aaKnown RBP1.99□□□□□ -2.09
YIR040CYIR040C YJR128WP47162 119 aa1.98□□□□□ -2.09
YIR040CYIR040C YNL146C-AQ3E7Z1 64 aa1.97□□□□□ -2.09
YIR040CYIR040C PMP3P87284 55 aa1.96□□□□□ -2.1
YIR040CYIR040C YJL127C-BQ3E828 52 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 71.6 ms