RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C YNL190WP53872 204 aa1.83□□□□□ -2.12
SDS3YIL084C HPA2Q06592 156 aa1.83□□□□□ -2.12
SDS3YIL084C YBR230W-AQ3E762 66 aa1.83□□□□□ -2.12
SDS3YIL084C YJL127C-BQ3E828 52 aa1.83□□□□□ -2.12
SDS3YIL084C SRB6P32570 121 aa1.82□□□□□ -2.12
SDS3YIL084C VMA21P41806 77 aa1.82□□□□□ -2.12
SDS3YIL084C YMR103CQ04436 120 aa1.82□□□□□ -2.12
SDS3YIL084C YOL014WQ08110 124 aa1.82□□□□□ -2.12
SDS3YIL084C RPS22BQ3E7Y3 130 aaKnown RBP1.82□□□□□ -2.12
SDS3YIL084C RPL29P05747 59 aaPredicted RBP1.81□□□□□ -2.12
SDS3YIL084C YOR072WQ08486 104 aa1.81□□□□□ -2.12
SDS3YIL084C YPL261CQ08976 102 aa1.81□□□□□ -2.12
SDS3YIL084C YML100W-AQ8TGT0 57 aa1.81□□□□□ -2.12
SDS3YIL084C YOR304C-AO14468 76 aa1.8□□□□□ -2.12
SDS3YIL084C COX7P10174 60 aa1.8□□□□□ -2.12
SDS3YIL084C FYV4P38783 130 aaPredicted RBP1.8□□□□□ -2.12
SDS3YIL084C MRPS12P53732 153 aa1.8□□□□□ -2.12
SDS3YIL084C RUB1Q03919 77 aa1.8□□□□□ -2.12
SDS3YIL084C FYV7Q12247 151 aa1.8□□□□□ -2.12
SDS3YIL084C GSP2P32836 220 aaKnown RBP1.79□□□□□ -2.12
SDS3YIL084C YLR412C-AQ3E742 68 aa1.79□□□□□ -2.12
SDS3YIL084C ATP5P09457 212 aa1.78□□□□□ -2.12
SDS3YIL084C CNL1Q06333 122 aa1.78□□□□□ -2.12
SDS3YIL084C YLR361C-AQ3E795 98 aa1.78□□□□□ -2.12
SDS3YIL084C FYV5P25585 152 aa1.77□□□□□ -2.13
SDS3YIL084C ATG8P38182 117 aaRIP-Chip data1.77□□□□□ -2.13not detected
SDS3YIL084C ARL3Q02804 198 aa1.77□□□□□ -2.13
SDS3YIL084C PAU17Q12370 124 aa1.77□□□□□ -2.13
SDS3YIL084C YOR034C-AQ3E735 80 aa1.77□□□□□ -2.13
SDS3YIL084C RPL36BO14455 100 aaKnown RBP1.76□□□□□ -2.13
SDS3YIL084C CWC27Q02770 301 aa1.76□□□□□ -2.13
SDS3YIL084C IRC21Q04772 201 aa1.76□□□□□ -2.13
SDS3YIL084C ZEO1Q08245 113 aa1.76□□□□□ -2.13
SDS3YIL084C YEL067CP39978 195 aa1.75□□□□□ -2.13
SDS3YIL084C NSE4P43124 402 aa1.75□□□□□ -2.13
SDS3YIL084C HHO1P53551 258 aa1.75□□□□□ -2.13
SDS3YIL084C COF1Q03048 143 aaKnown RBP1.75□□□□□ -2.13
SDS3YIL084C FYV12Q08559 129 aa1.75□□□□□ -2.13
SDS3YIL084C SLO1Q3E784 85 aa1.75□□□□□ -2.13
SDS3YIL084C GLC8P41818 229 aa1.74□□□□□ -2.13
SDS3YIL084C YGR039WP53225 103 aa1.74□□□□□ -2.13
SDS3YIL084C ICY1Q04329 127 aa1.74□□□□□ -2.13
SDS3YIL084C SCS22Q6Q595 175 aa1.74□□□□□ -2.13
SDS3YIL084C RPS29AP41057 56 aaKnown RBP1.73□□□□□ -2.13
SDS3YIL084C SAE3P89114 91 aa1.73□□□□□ -2.13
SDS3YIL084C YDL157CQ12082 118 aa1.73□□□□□ -2.13
SDS3YIL084C YHL042WP38729 150 aa1.72□□□□□ -2.13
SDS3YIL084C YER181CP40097 107 aa1.72□□□□□ -2.13
SDS3YIL084C YDR210WQ03482 75 aa1.72□□□□□ -2.13
SDS3YIL084C COX8P04039 78 aa1.71□□□□□ -2.14
SDS3YIL084C RAD6P06104 172 aa1.71□□□□□ -2.14
SDS3YIL084C YLR157W-DP0CE99 70 aa1.71□□□□□ -2.14
SDS3YIL084C YJL009WP47078 108 aa1.71□□□□□ -2.14
SDS3YIL084C SBH1P52870 82 aa1.71□□□□□ -2.14
SDS3YIL084C YIR021W-AQ3E739 70 aa1.71□□□□□ -2.14
SDS3YIL084C Q0017Q9ZZX8 53 aa1.71□□□□□ -2.14
SDS3YIL084C RSM18P40033 138 aa1.7□□□□□ -2.14
SDS3YIL084C YJR128WP47162 119 aa1.7□□□□□ -2.14
SDS3YIL084C ATP20Q12233 115 aa1.7□□□□□ -2.14
SDS3YIL084C RPS29BP41058 56 aaKnown RBP1.68□□□□□ -2.14
SDS3YIL084C YFL065CP43539 102 aa1.68□□□□□ -2.14
SDS3YIL084C PAU23Q07987 124 aa1.68□□□□□ -2.14
SDS3YIL084C ELC1Q03071 99 aa1.67□□□□□ -2.14
SDS3YIL084C LIP1Q03579 150 aa1.67□□□□□ -2.14
SDS3YIL084C YOL097W-AQ3E7Y9 61 aa1.67□□□□□ -2.14
SDS3YIL084C FUN14P18411 198 aa1.66□□□□□ -2.14
SDS3YIL084C YER187WP40102 141 aa1.66□□□□□ -2.14
SDS3YIL084C YNL277W-AQ3E7Z0 62 aa1.66□□□□□ -2.14
SDS3YIL084C MRPL44P19956 98 aa1.65□□□□□ -2.15
SDS3YIL084C YOR381W-AQ3E804 55 aa1.65□□□□□ -2.15
SDS3YIL084C SFT1P43682 97 aa1.64□□□□□ -2.15
SDS3YIL084C YHR130CP38834 111 aa1.63□□□□□ -2.15
SDS3YIL084C GTT1P40582 234 aa1.62□□□□□ -2.15
SDS3YIL084C YGL230CP53074 147 aa1.62□□□□□ -2.15
SDS3YIL084C YCR050CP25630 102 aa1.61□□□□□ -2.15
SDS3YIL084C YKL044WP36092 106 aa1.61□□□□□ -2.15
SDS3YIL084C TDA2P40045 126 aa1.61□□□□□ -2.15
SDS3YIL084C LSM8P47093 109 aaKnown RBP1.61□□□□□ -2.15
SDS3YIL084C EDC1P53080 175 aaPredicted RBP1.61□□□□□ -2.15
SDS3YIL084C MIC10Q96VH5 97 aa1.61□□□□□ -2.15
SDS3YIL084C INO4P13902 151 aa1.6□□□□□ -2.15
SDS3YIL084C MSL1P40567 111 aaPredicted RBP1.6□□□□□ -2.15
SDS3YIL084C RSM19P53733 91 aaPredicted RBP1.6□□□□□ -2.15
SDS3YIL084C SEN15Q04675 128 aa1.6□□□□□ -2.15
SDS3YIL084C YHR073W-AP0C5N7 58 aa1.59□□□□□ -2.15
SDS3YIL084C YJL133C-AQ3E7A3 74 aa1.59□□□□□ -2.15
SDS3YIL084C YHR213W-BQ8TGK1 99 aa1.59□□□□□ -2.15
SDS3YIL084C HUR1P45820 110 aa1.58□□□□□ -2.16
SDS3YIL084C YPR153WQ06537 140 aa1.58□□□□□ -2.16
SDS3YIL084C COA6Q3E846 104 aa1.58□□□□□ -2.16
SDS3YIL084C YOR376W-AQ3E805 51 aa1.57□□□□□ -2.16
SDS3YIL084C YIL134C-AQ45U18 67 aa1.57□□□□□ -2.16
SDS3YIL084C RPL37AP49166 88 aaKnown RBP1.55□□□□□ -2.16
SDS3YIL084C SOM1Q05676 74 aa1.55□□□□□ -2.16
SDS3YIL084C YFR009W-AP0C5M9 85 aa1.54□□□□□ -2.16
SDS3YIL084C SSS1P35179 80 aa1.54□□□□□ -2.16
SDS3YIL084C QCR10P37299 77 aa1.54□□□□□ -2.16
SDS3YIL084C ICS3P47034 131 aa1.54□□□□□ -2.16
SDS3YIL084C YOR316C-AQ3E806 69 aa1.54□□□□□ -2.16
SDS3YIL084C YJR107C-AP0CT86 78 aa1.53□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 53.4 ms