RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C YFL041W-AQ3E817 63 aa5.17□□□□□ -1.58
SNP1YIL061C YGL193CP53097 103 aa5.16□□□□□ -1.58
SNP1YIL061C YHR139C-AO13536 103 aa5.14□□□□□ -1.59
SNP1YIL061C YFR009W-AP0C5M9 85 aa5.14□□□□□ -1.59
SNP1YIL061C TSC3Q3E790 80 aa5.14□□□□□ -1.59
SNP1YIL061C YDR034C-AP0C289 58 aa5.13□□□□□ -1.59
SNP1YIL061C SPT4P32914 102 aaPredicted RBP5.12□□□□□ -1.59
SNP1YIL061C YLR156WP0CE96 114 aa5.11□□□□□ -1.59
SNP1YIL061C YLR159WP0CE97 114 aa5.11□□□□□ -1.59
SNP1YIL061C YLR161WP0CE98 114 aa5.11□□□□□ -1.59
SNP1YIL061C BET1P22804 142 aa5.11□□□□□ -1.59
SNP1YIL061C RSM19P53733 91 aaPredicted RBP5.11□□□□□ -1.59
SNP1YIL061C RAD6P06104 172 aa5.1□□□□□ -1.59
SNP1YIL061C YER039C-AP0CD97 72 aa5.1□□□□□ -1.59
SNP1YIL061C YAR1P46683 200 aa5.1□□□□□ -1.59
SNP1YIL061C EDC1P53080 175 aaPredicted RBP5.09□□□□□ -1.59
SNP1YIL061C EMC6Q12431 108 aa5.09□□□□□ -1.59
SNP1YIL061C GIS2P53849 153 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
SNP1YIL061C DDR2P89113 61 aa5.08□□□□□ -1.6
SNP1YIL061C YHL042WP38729 150 aa5.07□□□□□ -1.6
SNP1YIL061C RPL36BO14455 100 aaKnown RBP5.05□□□□□ -1.6
SNP1YIL061C ICS3P47034 131 aa5.05□□□□□ -1.6
SNP1YIL061C BSC4P53841 131 aa5.05□□□□□ -1.6
SNP1YIL061C SHH4Q06236 168 aa5.05□□□□□ -1.6
SNP1YIL061C YSY6P38374 65 aa5.04□□□□□ -1.6
SNP1YIL061C YHR007C-AQ07074 71 aa5.04□□□□□ -1.6
SNP1YIL061C EDC2P40023 145 aaPredicted RBP5.03□□□□□ -1.6
SNP1YIL061C YOR072WQ08486 104 aa5.03□□□□□ -1.6
SNP1YIL061C YDR119W-AQ2V2P9 66 aa5.03□□□□□ -1.6
SNP1YIL061C TDA8Q6B2U8 126 aa5.03□□□□□ -1.6
SNP1YIL061C YHR213W-BQ8TGK1 99 aa5.03□□□□□ -1.6
SNP1YIL061C COX23P38824 151 aa5.02□□□□□ -1.61
SNP1YIL061C TDA2P40045 126 aa5.02□□□□□ -1.61
SNP1YIL061C LCL2Q08045 131 aa5.02□□□□□ -1.61
SNP1YIL061C RPL38P49167 78 aaKnown RBP5.01□□□□□ -1.61
SNP1YIL061C YLR285C-AQ3E771 56 aa5.01□□□□□ -1.61
SNP1YIL061C YGR121W-AQ3E816 71 aa5.01□□□□□ -1.61
SNP1YIL061C RSM18P40033 138 aa5□□□□□ -1.61
SNP1YIL061C YNL184CP53876 108 aa5□□□□□ -1.61
SNP1YIL061C YOL014WQ08110 124 aa4.99□□□□□ -1.61
SNP1YIL061C YJL133C-AQ3E7A3 74 aa4.99□□□□□ -1.61
SNP1YIL061C YGR039WP53225 103 aa4.98□□□□□ -1.61
SNP1YIL061C LCL1Q02786 101 aa4.98□□□□□ -1.61
SNP1YIL061C COF1Q03048 143 aaKnown RBP4.98□□□□□ -1.61
SNP1YIL061C ECM19Q06011 112 aa4.97□□□□□ -1.61
SNP1YIL061C ATP20Q12233 115 aa4.97□□□□□ -1.61
SNP1YIL061C YPL038W-AQ3E7B4 63 aa4.97□□□□□ -1.61
SNP1YIL061C RPP2AP05319 106 aaKnown RBP4.96□□□□□ -1.62
SNP1YIL061C SPG1P50088 95 aa4.96□□□□□ -1.62
SNP1YIL061C YJL197C-AP0C5P0 93 aa4.95□□□□□ -1.62
SNP1YIL061C YEL045CP32616 141 aa4.95□□□□□ -1.62
SNP1YIL061C YHL018WP38744 120 aaPredicted RBP4.95□□□□□ -1.62
SNP1YIL061C YLR162WQ06235 118 aa4.95□□□□□ -1.62
SNP1YIL061C YLR415CO13578 112 aa4.94□□□□□ -1.62
SNP1YIL061C MIC10Q96VH5 97 aa4.94□□□□□ -1.62
SNP1YIL061C YCR050CP25630 102 aa4.93□□□□□ -1.62
SNP1YIL061C YJR085CP47131 105 aaKnown RBP4.93□□□□□ -1.62
SNP1YIL061C YKL183C-AQ3E765 70 aa4.93□□□□□ -1.62
SNP1YIL061C YMR230W-AQ3E7B5 62 aa4.93□□□□□ -1.62
SNP1YIL061C YKL069WP36088 180 aa4.9□□□□□ -1.63
SNP1YIL061C MMS2P53152 137 aa4.9□□□□□ -1.63
SNP1YIL061C YBR027CP38220 110 aa4.89□□□□□ -1.63
SNP1YIL061C YBL112CQ3E7Y4 105 aa4.89□□□□□ -1.63
SNP1YIL061C YDR246W-AQ3E763 66 aa4.88□□□□□ -1.63
SNP1YIL061C YBR182C-AQ8TGU6 64 aa4.88□□□□□ -1.63
SNP1YIL061C HOT13P36078 116 aa4.87□□□□□ -1.63
SNP1YIL061C TOM6P33448 61 aa4.86□□□□□ -1.63
SNP1YIL061C YOR314WQ12506 109 aa4.86□□□□□ -1.63
SNP1YIL061C YOR268CQ08734 132 aa4.84□□□□□ -1.63
SNP1YIL061C YOR304C-AO14468 76 aa4.83□□□□□ -1.64
SNP1YIL061C YER187WP40102 141 aa4.83□□□□□ -1.64
SNP1YIL061C YOL097W-AQ3E7Y9 61 aa4.83□□□□□ -1.64
SNP1YIL061C NOP10Q6Q547 58 aaPredicted RBP4.82□□□□□ -1.64
SNP1YIL061C YLR157W-DP0CE99 70 aa4.81□□□□□ -1.64
SNP1YIL061C YAR064WP39563 99 aa4.79□□□□□ -1.64
SNP1YIL061C YGL149WP53116 101 aa4.79□□□□□ -1.64
SNP1YIL061C DDR48P18899 430 aaKnown RBP4.78□□□□□ -1.64
SNP1YIL061C YCR043CP25361 127 aa4.78□□□□□ -1.64
SNP1YIL061C AIM4P38305 123 aaPredicted RBP4.78□□□□□ -1.64
SNP1YIL061C RPL36AP05745 100 aaPredicted RBP4.77□□□□□ -1.65
SNP1YIL061C YPL080CQ02826 108 aa4.77□□□□□ -1.65
SNP1YIL061C YOL166W-AQ8TGJ1 51 aa4.77□□□□□ -1.65
SNP1YIL061C YDR182W-AQ3E796 67 aa4.76□□□□□ -1.65
SNP1YIL061C YOL013W-AP0C272 63 aaPredicted RBP4.74□□□□□ -1.65
SNP1YIL061C LIP1Q03579 150 aa4.74□□□□□ -1.65
SNP1YIL061C YDL012CQ12489 107 aa4.72□□□□□ -1.65
SNP1YIL061C YIR021W-AQ3E739 70 aa4.72□□□□□ -1.65
SNP1YIL061C YIL102CP40488 101 aa4.7□□□□□ -1.66
SNP1YIL061C YPR153WQ06537 140 aa4.7□□□□□ -1.66
SNP1YIL061C KSH1Q8TGJ3 72 aa4.69□□□□□ -1.66
SNP1YIL061C YHR073W-AP0C5N7 58 aa4.67□□□□□ -1.66
SNP1YIL061C YHL005CP38752 130 aa4.66□□□□□ -1.66
SNP1YIL061C KTI11Q3E840 82 aa4.65□□□□□ -1.67
SNP1YIL061C YFL067WP43537 175 aa4.63□□□□□ -1.67
SNP1YIL061C YDR010CQ12426 110 aa4.63□□□□□ -1.67
SNP1YIL061C RPS30AP0CX33 63 aaKnown RBP4.61□□□□□ -1.67
SNP1YIL061C RPS30BP0CX34 63 aaKnown RBP4.61□□□□□ -1.67
SNP1YIL061C YHR125WP38831 101 aa4.61□□□□□ -1.67
SNP1YIL061C YLR361C-AQ3E795 98 aa4.6□□□□□ -1.67
SNP1YIL061C COX7P10174 60 aa4.56□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms