RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA10	YHR039C-A	ERI1	P62651	68 aa	Known RBP	1.35	□□□□□ -2.19
VMA10	YHR039C-A	YMR122C	Q03879	124 aa		1.35	□□□□□ -2.19
VMA10	YHR039C-A	LCL2	Q08045	131 aa		1.35	□□□□□ -2.19
VMA10	YHR039C-A	YIL156W-B	Q2V2P4	73 aa		1.35	□□□□□ -2.19
VMA10	YHR039C-A	PDR15	Q04182	1529 aa	Known RBP	1.35	□□□□□ -2.19
VMA10	YHR039C-A	CCW14	O13547	238 aa		1.34	□□□□□ -2.19
VMA10	YHR039C-A	RPL33A	P05744	107 aa	Known RBP	1.34	□□□□□ -2.19
VMA10	YHR039C-A	YIL163C	P40448	117 aa		1.34	□□□□□ -2.19
VMA10	YHR039C-A	BSC4	P53841	131 aa		1.34	□□□□□ -2.19
VMA10	YHR039C-A	YDR210W	Q03482	75 aa		1.34	□□□□□ -2.19
VMA10	YHR039C-A	YDR010C	Q12426	110 aa		1.34	□□□□□ -2.19
VMA10	YHR039C-A	NOP10	Q6Q547	58 aa	Predicted RBP	1.34	□□□□□ -2.19
VMA10	YHR039C-A	BUD3	P25558	1636 aa		1.33	□□□□□ -2.2
VMA10	YHR039C-A	PAU1	P0CE88	120 aa		1.33	□□□□□ -2.2
VMA10	YHR039C-A	PAU14	P0CE89	120 aa		1.33	□□□□□ -2.2
VMA10	YHR039C-A	VAM10	Q08474	114 aa		1.33	□□□□□ -2.2
VMA10	YHR039C-A	CCW12	Q12127	133 aa		1.33	□□□□□ -2.2
VMA10	YHR039C-A	AIM19	P40502	157 aa		1.32	□□□□□ -2.2
VMA10	YHR039C-A	MRPS12	P53732	153 aa		1.32	□□□□□ -2.2
VMA10	YHR039C-A	PAU20	Q08322	120 aa		1.32	□□□□□ -2.2
VMA10	YHR039C-A	BPH1	P25356	2167 aa		1.32	□□□□□ -2.2
VMA10	YHR039C-A	BRR2	P32639	2163 aa	Known RBP	1.32	□□□□□ -2.2
VMA10	YHR039C-A	YSF3	P0C074	85 aa	Predicted RBP	1.31	□□□□□ -2.2
VMA10	YHR039C-A	YDL022C-A	P0C5L6	82 aa		1.31	□□□□□ -2.2
VMA10	YHR039C-A	RPS11A	P0CX47	156 aa	Known RBP	1.31	□□□□□ -2.2
VMA10	YHR039C-A	RPS11B	P0CX48	156 aa	Known RBP	1.31	□□□□□ -2.2
VMA10	YHR039C-A	PAU7	P39545	55 aa		1.31	□□□□□ -2.2
VMA10	YHR039C-A	RPL37A	P49166	88 aa	Known RBP	1.31	□□□□□ -2.2
VMA10	YHR039C-A	YGL041C-B	Q3E750	60 aa		1.31	□□□□□ -2.2
VMA10	YHR039C-A	YAR064W	P39563	99 aa		1.3	□□□□□ -2.2
VMA10	YHR039C-A	YOR032W-A	Q8TGS1	66 aa		1.3	□□□□□ -2.2
VMA10	YHR039C-A	EDC1	P53080	175 aa	Predicted RBP	1.29	□□□□□ -2.2
VMA10	YHR039C-A	YGR240C-A	Q3E786	66 aa		1.29	□□□□□ -2.2
VMA10	YHR039C-A	YKL018C-A	Q3E7A7	99 aa		1.29	□□□□□ -2.2
VMA10	YHR039C-A	YNL042W-B	Q3E7Z2	85 aa		1.29	□□□□□ -2.2
VMA10	YHR039C-A	YOR034C-A	Q3E735	80 aa		1.28	□□□□□ -2.2
VMA10	YHR039C-A	RPS30A	P0CX33	63 aa	Known RBP	1.27	□□□□□ -2.21
VMA10	YHR039C-A	RPS30B	P0CX34	63 aa	Known RBP	1.27	□□□□□ -2.21
VMA10	YHR039C-A	YCR001W	P25347	104 aa		1.27	□□□□□ -2.21
VMA10	YHR039C-A	YBR032W	P38223	100 aa		1.27	□□□□□ -2.21
VMA10	YHR039C-A	YIL102C	P40488	101 aa		1.27	□□□□□ -2.21
VMA10	YHR039C-A	YNL190W	P53872	204 aa		1.27	□□□□□ -2.21
VMA10	YHR039C-A	YDR182W-A	Q3E796	67 aa		1.27	□□□□□ -2.21
VMA10	YHR039C-A	FIG2	P25653	1609 aa		1.26	□□□□□ -2.21
VMA10	YHR039C-A	YLR255C	O13574	117 aa		1.26	□□□□□ -2.21
VMA10	YHR039C-A	YOL013W-A	P0C272	63 aa	Predicted RBP	1.26	□□□□□ -2.21
VMA10	YHR039C-A	ATP17	Q06405	101 aa		1.26	□□□□□ -2.21
VMA10	YHR039C-A	YMR122W-A	Q3E842	84 aa		1.26	□□□□□ -2.21
VMA10	YHR039C-A	YNL122C	P53921	115 aa	Predicted RBP	1.25	□□□□□ -2.21
VMA10	YHR039C-A	SGF11	Q03067	99 aa		1.25	□□□□□ -2.21
VMA10	YHR039C-A	YOR192C-C	Q3E736	78 aa		1.25	□□□□□ -2.21
VMA10	YHR039C-A	YOL166W-A	Q8TGJ1	51 aa		1.25	□□□□□ -2.21
VMA10	YHR039C-A	BLM10	P43583	2143 aa		1.25	□□□□□ -2.21
VMA10	YHR039C-A	YIL086C	P40503	102 aa		1.23	□□□□□ -2.21
VMA10	YHR039C-A	MGR2	Q02889	113 aa		1.23	□□□□□ -2.21
VMA10	YHR039C-A	YBR201C-A	Q2V2Q3	67 aa		1.23	□□□□□ -2.21
VMA10	YHR039C-A	HUB1	Q6Q546	73 aa		1.23	□□□□□ -2.21
VMA10	YHR039C-A	Q0032	Q9ZZX7	96 aa		1.23	□□□□□ -2.21
VMA10	YHR039C-A	MVB12	P42939	101 aa		1.22	□□□□□ -2.21
VMA10	YHR039C-A	YJL009W	P47078	108 aa		1.22	□□□□□ -2.21
VMA10	YHR039C-A	ATP18	P81450	59 aa		1.22	□□□□□ -2.21
VMA10	YHR039C-A	SEC16	P48415	2195 aa	Known RBP	1.22	□□□□□ -2.21
VMA10	YHR039C-A	POL2	P21951	2222 aa	Known RBP	1.21	□□□□□ -2.21
VMA10	YHR039C-A	SHU1	P38751	150 aa		1.21	□□□□□ -2.22
VMA10	YHR039C-A	LCL1	Q02786	101 aa		1.21	□□□□□ -2.22
VMA10	YHR039C-A	RPL37B	P51402	88 aa	Known RBP	1.2	□□□□□ -2.22
VMA10	YHR039C-A	COX7	P10174	60 aa		1.19	□□□□□ -2.22
VMA10	YHR039C-A	HHY1	P39982	102 aa		1.19	□□□□□ -2.22
VMA10	YHR039C-A	YLR146W-A	Q2V2P1	62 aa		1.19	□□□□□ -2.22
VMA10	YHR039C-A	SDH6	Q3E785	79 aa		1.19	□□□□□ -2.22
VMA10	YHR039C-A	YOL097W-A	Q3E7Y9	61 aa		1.19	□□□□□ -2.22
VMA10	YHR039C-A	HKR1	P41809	1802 aa		1.18	□□□□□ -2.22
VMA10	YHR039C-A	YLR157W-D	P0CE99	70 aa		1.18	□□□□□ -2.22
VMA10	YHR039C-A	YOR072W	Q08486	104 aa		1.18	□□□□□ -2.22
VMA10	YHR039C-A	YMR001C-A	Q8TGS9	76 aa		1.17	□□□□□ -2.22
VMA10	YHR039C-A	YMR141C	P40211	102 aa		1.16	□□□□□ -2.22
VMA10	YHR039C-A	HUG1	Q6Q5K6	68 aa		1.16	□□□□□ -2.22
VMA10	YHR039C-A	YBL039W-B	P0C268	59 aa		1.15	□□□□□ -2.23
VMA10	YHR039C-A	YJR107C-A	P0CT86	78 aa		1.15	□□□□□ -2.23
VMA10	YHR039C-A	YJR128W	P47162	119 aa		1.15	□□□□□ -2.23
VMA10	YHR039C-A	YPR108W-A	Q3E7B3	70 aa		1.15	□□□□□ -2.23
VMA10	YHR039C-A	YHR213W-B	Q8TGK1	99 aa		1.15	□□□□□ -2.23
VMA10	YHR039C-A	HFA1	P32874	2273 aa		1.14	□□□□□ -2.23
VMA10	YHR039C-A	RPL38	P49167	78 aa	Known RBP	1.13	□□□□□ -2.23
VMA10	YHR039C-A	YPR010C-A	A5Z2X5	72 aa		1.12	□□□□□ -2.23
VMA10	YHR039C-A	YBR200W-A	Q3E755	54 aa		1.12	□□□□□ -2.23
VMA10	YHR039C-A	TOS6	P48560	102 aa		1.11	□□□□□ -2.23
VMA10	YHR039C-A	YOR011W-A	Q3E807	68 aa		1.11	□□□□□ -2.23
VMA10	YHR039C-A	RPC10	P40422	70 aa		1.1	□□□□□ -2.23
VMA10	YHR039C-A	YGR025W	P53216	100 aa		1.1	□□□□□ -2.23
VMA10	YHR039C-A	COA2	Q3E823	68 aa		1.1	□□□□□ -2.23
VMA10	YHR039C-A	YOR394C-A	Q8TGJ0	55 aa		1.1	□□□□□ -2.23
VMA10	YHR039C-A	RPS27A	P35997	82 aa	Known RBP	1.09	□□□□□ -2.23
VMA10	YHR039C-A	SEN1	Q00416	2231 aa	Known RBP	1.09	□□□□□ -2.24
VMA10	YHR039C-A	YFR009W-A	P0C5M9	85 aa		1.08	□□□□□ -2.24
VMA10	YHR039C-A	URA2	P07259	2214 aa	Known RBP	1.08	□□□□□ -2.24
VMA10	YHR039C-A	OLI1	P61829	76 aa		1.07	□□□□□ -2.24
VMA10	YHR039C-A	YBR072C-A	Q3E794	53 aa		1.07	□□□□□ -2.24
VMA10	YHR039C-A	COX9	P07255	59 aa		1.05	□□□□□ -2.24
VMA10	YHR039C-A	AUA1	P32450	94 aa		1.05	□□□□□ -2.24

Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms