RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C YIL163CP40448 117 aa2.49□□□□□ -2.01
PDX1YGR193C YNL042W-BQ3E7Z2 85 aa2.49□□□□□ -2.01
PDX1YGR193C NUP192P47054 1683 aa2.49□□□□□ -2.01
PDX1YGR193C YDL022C-AP0C5L6 82 aa2.48□□□□□ -2.01
PDX1YGR193C YBR219CP38317 127 aa2.48□□□□□ -2.01
PDX1YGR193C ATP17Q06405 101 aa2.48□□□□□ -2.01
PDX1YGR193C YOR034C-AQ3E735 80 aa2.48□□□□□ -2.01
PDX1YGR193C YOL166W-AQ8TGJ1 51 aa2.48□□□□□ -2.01
PDX1YGR193C STT4P37297 1900 aa2.48□□□□□ -2.01
PDX1YGR193C RPS11AP0CX47 156 aaKnown RBP2.47□□□□□ -2.01
PDX1YGR193C RPS11BP0CX48 156 aaKnown RBP2.47□□□□□ -2.01
PDX1YGR193C YCR001WP25347 104 aa2.47□□□□□ -2.01
PDX1YGR193C YNL190WP53872 204 aa2.47□□□□□ -2.01
PDX1YGR193C CCW12Q12127 133 aa2.47□□□□□ -2.01
PDX1YGR193C COX9P07255 59 aa2.46□□□□□ -2.02
PDX1YGR193C LCL2Q08045 131 aa2.46□□□□□ -2.02
PDX1YGR193C YGL041C-BQ3E750 60 aa2.46□□□□□ -2.02
PDX1YGR193C YHR007C-AQ07074 71 aa2.45□□□□□ -2.02
PDX1YGR193C RPL33AP05744 107 aaKnown RBP2.44□□□□□ -2.02
PDX1YGR193C YSF3P0C074 85 aaPredicted RBP2.44□□□□□ -2.02
PDX1YGR193C YJL144WP47009 104 aa2.44□□□□□ -2.02
PDX1YGR193C YNL122CP53921 115 aaPredicted RBP2.44□□□□□ -2.02
PDX1YGR193C SGF11Q03067 99 aa2.44□□□□□ -2.02
PDX1YGR193C COA2Q3E823 68 aa2.44□□□□□ -2.02
PDX1YGR193C YDR210WQ03482 75 aa2.43□□□□□ -2.02
PDX1YGR193C AQY2P0CD90 149 aa2.41□□□□□ -2.02
PDX1YGR193C SHU1P38751 150 aa2.41□□□□□ -2.02
PDX1YGR193C FAS1P07149 2051 aaKnown RBP2.41□□□□□ -2.02
PDX1YGR193C MRPS12P53732 153 aa2.4□□□□□ -2.03
PDX1YGR193C YMR007WQ03675 126 aa2.4□□□□□ -2.03
PDX1YGR193C YDR114CQ04597 100 aa2.4□□□□□ -2.03
PDX1YGR193C SDH6Q3E785 79 aa2.4□□□□□ -2.03
PDX1YGR193C TAR1Q8TGM6 124 aa2.4□□□□□ -2.03
PDX1YGR193C YLR157W-DP0CE99 70 aa2.39□□□□□ -2.03
PDX1YGR193C YJR107C-AP0CT86 78 aa2.39□□□□□ -2.03
PDX1YGR193C YER084WP40057 128 aa2.39□□□□□ -2.03
PDX1YGR193C VAM10Q08474 114 aa2.39□□□□□ -2.03
PDX1YGR193C YMR122W-AQ3E842 84 aa2.39□□□□□ -2.03
PDX1YGR193C YMR001C-AQ8TGS9 76 aa2.39□□□□□ -2.03
PDX1YGR193C BPH1P25356 2167 aa2.39□□□□□ -2.03
PDX1YGR193C YIL102CP40488 101 aa2.38□□□□□ -2.03
PDX1YGR193C RPL38P49167 78 aaKnown RBP2.38□□□□□ -2.03
PDX1YGR193C YOL097W-AQ3E7Y9 61 aa2.38□□□□□ -2.03
PDX1YGR193C YBR201C-AQ2V2Q3 67 aa2.37□□□□□ -2.03
PDX1YGR193C YGR240C-AQ3E786 66 aa2.37□□□□□ -2.03
PDX1YGR193C YJR146WP47174 117 aa2.36□□□□□ -2.03
PDX1YGR193C TOS6P48560 102 aa2.36□□□□□ -2.03
PDX1YGR193C ATP18P81450 59 aa2.36□□□□□ -2.03
PDX1YGR193C MGR2Q02889 113 aa2.36□□□□□ -2.03
PDX1YGR193C YMR141CP40211 102 aa2.35□□□□□ -2.03
PDX1YGR193C HKR1P41809 1802 aa2.35□□□□□ -2.03
PDX1YGR193C YLR255CO13574 117 aa2.34□□□□□ -2.03
PDX1YGR193C Q0032Q9ZZX7 96 aa2.34□□□□□ -2.03
PDX1YGR193C MVB12P42939 101 aa2.33□□□□□ -2.04
PDX1YGR193C CDC39P25655 2108 aaKnown RBP2.33□□□□□ -2.04
PDX1YGR193C FIG2P25653 1609 aa2.32□□□□□ -2.04
PDX1YGR193C YBL039W-BP0C268 59 aa2.32□□□□□ -2.04
PDX1YGR193C YPR010C-AA5Z2X5 72 aa2.31□□□□□ -2.04
PDX1YGR193C YIL086CP40503 102 aa2.31□□□□□ -2.04
PDX1YGR193C RDS3Q06835 107 aaPredicted RBP2.31□□□□□ -2.04
PDX1YGR193C YOR008C-AQ3E7B9 74 aa2.31□□□□□ -2.04
PDX1YGR193C YOL013W-AP0C272 63 aaPredicted RBP2.3□□□□□ -2.04
PDX1YGR193C YEL008WP40001 126 aa2.3□□□□□ -2.04
PDX1YGR193C HUA1P40325 198 aa2.29□□□□□ -2.04
PDX1YGR193C TOM7P53507 60 aa2.29□□□□□ -2.04
PDX1YGR193C YJL009WP47078 108 aa2.28□□□□□ -2.04
PDX1YGR193C YGR025WP53216 100 aa2.28□□□□□ -2.04
PDX1YGR193C YDL012CQ12489 107 aa2.28□□□□□ -2.04
PDX1YGR193C YPR108W-AQ3E7B3 70 aa2.28□□□□□ -2.04
PDX1YGR193C YOR011W-AQ3E807 68 aa2.28□□□□□ -2.04
PDX1YGR193C HUG1Q6Q5K6 68 aa2.28□□□□□ -2.04
PDX1YGR193C YFR009W-AP0C5M9 85 aa2.27□□□□□ -2.05
PDX1YGR193C COX7P10174 60 aa2.27□□□□□ -2.05
PDX1YGR193C YBR200W-AQ3E755 54 aa2.27□□□□□ -2.05
PDX1YGR193C BRR2P32639 2163 aaKnown RBP2.27□□□□□ -2.05
PDX1YGR193C LCL1Q02786 101 aa2.25□□□□□ -2.05
PDX1YGR193C YOR072WQ08486 104 aa2.25□□□□□ -2.05
PDX1YGR193C YCL042WP25572 119 aa2.23□□□□□ -2.05
PDX1YGR193C YNL146C-AQ3E7Z1 64 aa2.22□□□□□ -2.05
PDX1YGR193C YLR342W-AQ3E810 57 aa2.22□□□□□ -2.05
PDX1YGR193C YJR128WP47162 119 aa2.21□□□□□ -2.06
PDX1YGR193C YGL258W-AQ3E740 77 aa2.2□□□□□ -2.06
PDX1YGR193C YBR230W-AQ3E762 66 aa2.2□□□□□ -2.06
PDX1YGR193C YOR394C-AQ8TGJ0 55 aa2.2□□□□□ -2.06
PDX1YGR193C BLM10P43583 2143 aa2.2□□□□□ -2.06
PDX1YGR193C ACC1Q00955 2233 aaKnown RBP2.19□□□□□ -2.06
PDX1YGR193C SIP18P50263 79 aa2.18□□□□□ -2.06
PDX1YGR193C OLI1P61829 76 aa2.18□□□□□ -2.06
PDX1YGR193C AUA1P32450 94 aa2.17□□□□□ -2.06
PDX1YGR193C YHR213W-BQ8TGK1 99 aa2.17□□□□□ -2.06
PDX1YGR193C YLL006W-AQ3E814 58 aa2.16□□□□□ -2.06
PDX1YGR193C YJL133C-AQ3E7A3 74 aa2.15□□□□□ -2.07
PDX1YGR193C FLO1P32768 1537 aa2.14□□□□□ -2.07
PDX1YGR193C RPC10P40422 70 aa2.13□□□□□ -2.07
PDX1YGR193C YAR064WP39563 99 aa2.12□□□□□ -2.07
PDX1YGR193C YLR307C-AQ3E825 87 aa2.12□□□□□ -2.07
PDX1YGR193C RPS27AP35997 82 aaKnown RBP2.1□□□□□ -2.07
PDX1YGR193C RPL29P05747 59 aaPredicted RBP2.08□□□□□ -2.08
PDX1YGR193C HHY1P39982 102 aa2.08□□□□□ -2.08
PDX1YGR193C DDR2P89113 61 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms