RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C LCL2Q08045 131 aa1.91□□□□□ -2.1
MSM1YGR171C YKL018C-AQ3E7A7 99 aa1.91□□□□□ -2.1
MSM1YGR171C YOR032W-AQ8TGS1 66 aa1.91□□□□□ -2.1
MSM1YGR171C RPS11AP0CX47 156 aaKnown RBP1.9□□□□□ -2.11
MSM1YGR171C RPS11BP0CX48 156 aaKnown RBP1.9□□□□□ -2.11
MSM1YGR171C EDC1P53080 175 aaPredicted RBP1.9□□□□□ -2.11
MSM1YGR171C YNL122CP53921 115 aaPredicted RBP1.9□□□□□ -2.11
MSM1YGR171C ACC1Q00955 2233 aaKnown RBP1.9□□□□□ -2.11
MSM1YGR171C ATG2P53855 1592 aa1.9□□□□□ -2.11
MSM1YGR171C DNF2Q12675 1612 aa1.9□□□□□ -2.11
MSM1YGR171C CYR1P08678 2026 aaKnown RBP1.89□□□□□ -2.11
MSM1YGR171C MRPS12P53732 153 aa1.89□□□□□ -2.11
MSM1YGR171C CCW12Q12127 133 aa1.89□□□□□ -2.11
MSM1YGR171C YDR182W-AQ3E796 67 aa1.89□□□□□ -2.11
MSM1YGR171C YNL042W-BQ3E7Z2 85 aa1.89□□□□□ -2.11
MSM1YGR171C UBR2Q07963 1872 aa1.89□□□□□ -2.11
MSM1YGR171C YOR192C-CQ3E736 78 aa1.88□□□□□ -2.11
MSM1YGR171C YGR240C-AQ3E786 66 aa1.88□□□□□ -2.11
MSM1YGR171C GCN2P15442 1659 aa1.88□□□□□ -2.11
MSM1YGR171C RPS30AP0CX33 63 aaKnown RBP1.88□□□□□ -2.11
MSM1YGR171C RPS30BP0CX34 63 aaKnown RBP1.88□□□□□ -2.11
MSM1YGR171C YAR064WP39563 99 aa1.88□□□□□ -2.11
MSM1YGR171C YOR034C-AQ3E735 80 aa1.88□□□□□ -2.11
MSM1YGR171C BEM2P39960 2167 aaKnown RBP1.88□□□□□ -2.11
MSM1YGR171C YRF1-1P0CX20 1796 aa1.87□□□□□ -2.11
MSM1YGR171C YRF1-5P0CX21 1796 aa1.87□□□□□ -2.11
MSM1YGR171C YRF1-8P0CX22 1796 aa1.87□□□□□ -2.11
MSM1YGR171C ARO1P08566 1588 aaKnown RBP1.87□□□□□ -2.11
MSM1YGR171C YHR212W-AP0CX91 67 aa1.87□□□□□ -2.11
MSM1YGR171C MOT1P32333 1867 aa1.86□□□□□ -2.11
MSM1YGR171C YNL190WP53872 204 aa1.86□□□□□ -2.11
MSM1YGR171C ATP17Q06405 101 aa1.85□□□□□ -2.11
MSM1YGR171C YOL166W-AQ8TGJ1 51 aa1.85□□□□□ -2.11
MSM1YGR171C YIL102CP40488 101 aa1.84□□□□□ -2.11
MSM1YGR171C YLR146W-AQ2V2P1 62 aa1.84□□□□□ -2.11
MSM1YGR171C SNF2P22082 1703 aa1.84□□□□□ -2.12
MSM1YGR171C AQY2P0CD90 149 aa1.83□□□□□ -2.12
MSM1YGR171C YCR001WP25347 104 aa1.83□□□□□ -2.12
MSM1YGR171C SGF11Q03067 99 aa1.83□□□□□ -2.12
MSM1YGR171C YMR122W-AQ3E842 84 aa1.83□□□□□ -2.12
MSM1YGR171C YLR255CO13574 117 aa1.83□□□□□ -2.12
MSM1YGR171C HUB1Q6Q546 73 aa1.83□□□□□ -2.12
MSM1YGR171C MGR2Q02889 113 aa1.82□□□□□ -2.12
MSM1YGR171C DNF3Q12674 1656 aa1.82□□□□□ -2.12
MSM1YGR171C VMR1P38735 1592 aa1.81□□□□□ -2.12
MSM1YGR171C YMR007WQ03675 126 aa1.8□□□□□ -2.12
MSM1YGR171C YBR201C-AQ2V2Q3 67 aa1.8□□□□□ -2.12
MSM1YGR171C STT4P37297 1900 aa1.8□□□□□ -2.12
MSM1YGR171C NUP192P47054 1683 aa1.8□□□□□ -2.12
MSM1YGR171C SLH1P53327 1967 aaKnown RBP1.8□□□□□ -2.12
MSM1YGR171C BUD3P25558 1636 aa1.79□□□□□ -2.12
MSM1YGR171C Q0032Q9ZZX7 96 aa1.78□□□□□ -2.12
MSM1YGR171C YOL013W-AP0C272 63 aaPredicted RBP1.77□□□□□ -2.13
MSM1YGR171C YIL086CP40503 102 aa1.77□□□□□ -2.13
MSM1YGR171C MVB12P42939 101 aa1.77□□□□□ -2.13
MSM1YGR171C ATP18P81450 59 aa1.77□□□□□ -2.13
MSM1YGR171C HUG1Q6Q5K6 68 aa1.77□□□□□ -2.13
MSM1YGR171C SHU1P38751 150 aa1.76□□□□□ -2.13
MSM1YGR171C LCL1Q02786 101 aa1.76□□□□□ -2.13
MSM1YGR171C SDH6Q3E785 79 aa1.76□□□□□ -2.13
MSM1YGR171C YOL097W-AQ3E7Y9 61 aa1.76□□□□□ -2.13
MSM1YGR171C BPH1P25356 2167 aa1.75□□□□□ -2.13
MSM1YGR171C URB1P34241 1764 aaKnown RBP1.75□□□□□ -2.13
MSM1YGR171C YLR157W-DP0CE99 70 aa1.75□□□□□ -2.13
MSM1YGR171C YMR001C-AQ8TGS9 76 aa1.75□□□□□ -2.13
MSM1YGR171C HFA1P32874 2273 aa1.75□□□□□ -2.13
MSM1YGR171C BRR2P32639 2163 aaKnown RBP1.75□□□□□ -2.13
MSM1YGR171C YJR107C-AP0CT86 78 aa1.74□□□□□ -2.13
MSM1YGR171C YHR213W-BQ8TGK1 99 aa1.73□□□□□ -2.13
MSM1YGR171C YMR141CP40211 102 aa1.72□□□□□ -2.13
MSM1YGR171C YBL039W-BP0C268 59 aa1.71□□□□□ -2.13
MSM1YGR171C COX7P10174 60 aa1.71□□□□□ -2.13
MSM1YGR171C YJR128WP47162 119 aa1.71□□□□□ -2.13
MSM1YGR171C FIG2P25653 1609 aa1.71□□□□□ -2.14
MSM1YGR171C RPL38P49167 78 aaKnown RBP1.71□□□□□ -2.14
MSM1YGR171C YPR108W-AQ3E7B3 70 aa1.71□□□□□ -2.14
MSM1YGR171C COA2Q3E823 68 aa1.71□□□□□ -2.14
MSM1YGR171C HHY1P39982 102 aa1.69□□□□□ -2.14
MSM1YGR171C YBR200W-AQ3E755 54 aa1.69□□□□□ -2.14
MSM1YGR171C YPR010C-AA5Z2X5 72 aa1.68□□□□□ -2.14
MSM1YGR171C HUA1P40325 198 aa1.68□□□□□ -2.14
MSM1YGR171C TOS6P48560 102 aa1.68□□□□□ -2.14
MSM1YGR171C YOR011W-AQ3E807 68 aa1.67□□□□□ -2.14
MSM1YGR171C COX9P07255 59 aa1.65□□□□□ -2.15
MSM1YGR171C YGR025WP53216 100 aa1.64□□□□□ -2.15
MSM1YGR171C YBR072C-AQ3E794 53 aa1.64□□□□□ -2.15
MSM1YGR171C SEC16P48415 2195 aaKnown RBP1.63□□□□□ -2.15
MSM1YGR171C YFR009W-AP0C5M9 85 aa1.63□□□□□ -2.15
MSM1YGR171C RPC10P40422 70 aa1.63□□□□□ -2.15
MSM1YGR171C YOR394C-AQ8TGJ0 55 aa1.63□□□□□ -2.15
MSM1YGR171C BLM10P43583 2143 aa1.59□□□□□ -2.16
MSM1YGR171C AUA1P32450 94 aa1.58□□□□□ -2.16
MSM1YGR171C RPS27AP35997 82 aaKnown RBP1.58□□□□□ -2.16
MSM1YGR171C TOM7P53507 60 aa1.58□□□□□ -2.16
MSM1YGR171C OLI1P61829 76 aa1.58□□□□□ -2.16
MSM1YGR171C YBR230W-AQ3E762 66 aa1.58□□□□□ -2.16
MSM1YGR171C YOR008C-AQ3E7B9 74 aa1.58□□□□□ -2.16
MSM1YGR171C POL2P21951 2222 aaKnown RBP1.58□□□□□ -2.16
MSM1YGR171C YLR342W-AQ3E810 57 aa1.55□□□□□ -2.16
MSM1YGR171C RPL43AP0CX25 92 aaKnown RBP1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms