RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W YHR130CP38834 111 aa3.73□□□□□ -1.81
MSP1YGR028W BET1P22804 142 aa3.72□□□□□ -1.81
MSP1YGR028W ELC1Q03071 99 aa3.72□□□□□ -1.81
MSP1YGR028W FUN14P18411 198 aa3.71□□□□□ -1.82
MSP1YGR028W YHR139C-AO13536 103 aa3.7□□□□□ -1.82
MSP1YGR028W MPC3P53311 146 aa3.7□□□□□ -1.82
MSP1YGR028W PAU23Q07987 124 aa3.7□□□□□ -1.82
MSP1YGR028W RPL36BO14455 100 aaKnown RBP3.69□□□□□ -1.82
MSP1YGR028W GLC8P41818 229 aa3.69□□□□□ -1.82
MSP1YGR028W FYV7Q12247 151 aa3.69□□□□□ -1.82
MSP1YGR028W YAL063C-AQ3E791 96 aa3.68□□□□□ -1.82
MSP1YGR028W YNL184CP53876 108 aa3.67□□□□□ -1.82
MSP1YGR028W YHL018WP38744 120 aaPredicted RBP3.66□□□□□ -1.82
MSP1YGR028W SAE3P89114 91 aa3.66□□□□□ -1.82
MSP1YGR028W YDL012CQ12489 107 aa3.66□□□□□ -1.82
MSP1YGR028W MSA2P36157 363 aa3.65□□□□□ -1.83
MSP1YGR028W HUR1P45820 110 aa3.65□□□□□ -1.83
MSP1YGR028W CWC27Q02770 301 aa3.65□□□□□ -1.83
MSP1YGR028W NHP2P32495 156 aaPredicted RBP3.64□□□□□ -1.83
MSP1YGR028W YHL005CP38752 130 aa3.64□□□□□ -1.83
MSP1YGR028W YER181CP40097 107 aa3.64□□□□□ -1.83
MSP1YGR028W YIL002W-AQ3E7Z5 69 aa3.64□□□□□ -1.83
MSP1YGR028W RSM18P40033 138 aa3.62□□□□□ -1.83
MSP1YGR028W YLR363W-AQ3E747 85 aa3.62□□□□□ -1.83
MSP1YGR028W YDL085C-AQ3E7B7 68 aaKnown RBP3.62□□□□□ -1.83
MSP1YGR028W PAI3P01094 68 aa3.61□□□□□ -1.83
MSP1YGR028W SFT1P43682 97 aa3.61□□□□□ -1.83
MSP1YGR028W RPL37BP51402 88 aaKnown RBP3.61□□□□□ -1.83
MSP1YGR028W OST2P46964 130 aa3.6□□□□□ -1.83
MSP1YGR028W LSM6Q06406 86 aaKnown RBP3.6□□□□□ -1.83
MSP1YGR028W POP7P38291 140 aa3.58□□□□□ -1.84
MSP1YGR028W DSE2P38844 325 aa3.58□□□□□ -1.84
MSP1YGR028W YAR1P46683 200 aa3.57□□□□□ -1.84
MSP1YGR028W YNL122CP53921 115 aaPredicted RBP3.57□□□□□ -1.84
MSP1YGR028W YLR157W-DP0CE99 70 aa3.56□□□□□ -1.84
MSP1YGR028W COX7P10174 60 aa3.55□□□□□ -1.84
MSP1YGR028W TSC3Q3E790 80 aa3.55□□□□□ -1.84
MSP1YGR028W TDA8Q6B2U8 126 aa3.55□□□□□ -1.84
MSP1YGR028W YJR107C-AP0CT86 78 aa3.54□□□□□ -1.84
MSP1YGR028W YLR296WQ05898 108 aa3.54□□□□□ -1.84
MSP1YGR028W RSM19P53733 91 aaPredicted RBP3.53□□□□□ -1.84
MSP1YGR028W RUB1Q03919 77 aa3.53□□□□□ -1.84
MSP1YGR028W YOL097W-AQ3E7Y9 61 aa3.53□□□□□ -1.84
MSP1YGR028W YFR009W-AP0C5M9 85 aa3.52□□□□□ -1.85
MSP1YGR028W YHR213W-BQ8TGK1 99 aa3.52□□□□□ -1.85
MSP1YGR028W ATP18P81450 59 aa3.51□□□□□ -1.85
MSP1YGR028W YLR162WQ06235 118 aa3.51□□□□□ -1.85
MSP1YGR028W YJL133C-AQ3E7A3 74 aa3.5□□□□□ -1.85
MSP1YGR028W MIC10Q96VH5 97 aa3.5□□□□□ -1.85
MSP1YGR028W ECM19Q06011 112 aa3.49□□□□□ -1.85
MSP1YGR028W ICS3P47034 131 aa3.48□□□□□ -1.85
MSP1YGR028W YIL102C-AQ2V2P5 75 aa3.46□□□□□ -1.86
MSP1YGR028W YNL198CP40166 100 aa3.45□□□□□ -1.86
MSP1YGR028W SLO1Q3E784 85 aa3.45□□□□□ -1.86
MSP1YGR028W EDC1P53080 175 aaPredicted RBP3.43□□□□□ -1.86
MSP1YGR028W COF1Q03048 143 aaKnown RBP3.43□□□□□ -1.86
MSP1YGR028W SHH4Q06236 168 aa3.43□□□□□ -1.86
MSP1YGR028W YOL014WQ08110 124 aa3.43□□□□□ -1.86
MSP1YGR028W COX23P38824 151 aa3.42□□□□□ -1.86
MSP1YGR028W YPR170W-BP0C5R9 85 aa3.41□□□□□ -1.86
MSP1YGR028W YER187WP40102 141 aa3.41□□□□□ -1.86
MSP1YGR028W YDR381C-AQ3E6R5 114 aa3.41□□□□□ -1.86
MSP1YGR028W RPL38P49167 78 aaKnown RBP3.4□□□□□ -1.87
MSP1YGR028W YLR361C-AQ3E795 98 aa3.4□□□□□ -1.87
MSP1YGR028W ATX1P38636 73 aa3.38□□□□□ -1.87
MSP1YGR028W TDA2P40045 126 aa3.36□□□□□ -1.87
MSP1YGR028W YPL080CQ02826 108 aa3.36□□□□□ -1.87
MSP1YGR028W INO4P13902 151 aa3.35□□□□□ -1.87
MSP1YGR028W FYV12Q08559 129 aa3.35□□□□□ -1.87
MSP1YGR028W YHR073W-AP0C5N7 58 aa3.34□□□□□ -1.87
MSP1YGR028W PBI2P0CT04 75 aaKnown RBP3.34□□□□□ -1.87
MSP1YGR028W ISD11Q6Q560 94 aa3.34□□□□□ -1.87
MSP1YGR028W RPL36AP05745 100 aaPredicted RBP3.32□□□□□ -1.88
MSP1YGR028W RPA12P32529 125 aaKnown RBP3.32□□□□□ -1.88
MSP1YGR028W YHL042WP38729 150 aa3.32□□□□□ -1.88
MSP1YGR028W YAL067W-AQ8TGK6 75 aa3.32□□□□□ -1.88
MSP1YGR028W YOR304C-AO14468 76 aa3.31□□□□□ -1.88
MSP1YGR028W YAR064WP39563 99 aa3.31□□□□□ -1.88
MSP1YGR028W YJR128WP47162 119 aa3.31□□□□□ -1.88
MSP1YGR028W Q0017Q9ZZX8 53 aa3.31□□□□□ -1.88
MSP1YGR028W YPR153WQ06537 140 aa3.29□□□□□ -1.88
MSP1YGR028W YOR316C-AQ3E806 69 aa3.29□□□□□ -1.88
MSP1YGR028W YJL144WP47009 104 aa3.28□□□□□ -1.88
MSP1YGR028W YJL009WP47078 108 aa3.28□□□□□ -1.88
MSP1YGR028W ATP20Q12233 115 aa3.28□□□□□ -1.88
MSP1YGR028W RAD6P06104 172 aa3.27□□□□□ -1.89
MSP1YGR028W YCR085WP25650 117 aa3.27□□□□□ -1.89
MSP1YGR028W YFL065CP43539 102 aa3.27□□□□□ -1.89
MSP1YGR028W SKI6P46948 246 aaPredicted RBP3.27□□□□□ -1.89
MSP1YGR028W YPR203WQ08994 102 aa3.27□□□□□ -1.89
MSP1YGR028W YCR050CP25630 102 aa3.26□□□□□ -1.89
MSP1YGR028W YGR164WP53291 111 aa3.26□□□□□ -1.89
MSP1YGR028W YDR210WQ03482 75 aa3.24□□□□□ -1.89
MSP1YGR028W YGR039WP53225 103 aa3.23□□□□□ -1.89
MSP1YGR028W EMC6Q12431 108 aa3.21□□□□□ -1.9
MSP1YGR028W YFL041W-AQ3E817 63 aa3.2□□□□□ -1.9
MSP1YGR028W YKL183C-AQ3E765 70 aa3.19□□□□□ -1.9
MSP1YGR028W YBR121C-AP0C5L4 52 aa3.18□□□□□ -1.9
MSP1YGR028W YLR285C-AQ3E771 56 aa3.17□□□□□ -1.9
MSP1YGR028W YGL034CP53186 121 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms