RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W DDR2P89113 61 aa4.35□□□□□ -1.71
NUP49YGL172W YIL102C-AQ2V2P5 75 aa4.35□□□□□ -1.71
NUP49YGL172W YLR156WP0CE96 114 aa4.34□□□□□ -1.71
NUP49YGL172W YLR159WP0CE97 114 aa4.34□□□□□ -1.71
NUP49YGL172W YLR161WP0CE98 114 aa4.34□□□□□ -1.71
NUP49YGL172W FYV5P25585 152 aa4.34□□□□□ -1.71
NUP49YGL172W YIR021W-AQ3E739 70 aa4.34□□□□□ -1.71
NUP49YGL172W MPC3P53311 146 aa4.32□□□□□ -1.72
NUP49YGL172W YLR236CA0A023PZG4 107 aa4.31□□□□□ -1.72
NUP49YGL172W YPR170W-BP0C5R9 85 aa4.31□□□□□ -1.72
NUP49YGL172W YCR043CP25361 127 aa4.31□□□□□ -1.72
NUP49YGL172W YNL198CP40166 100 aa4.31□□□□□ -1.72
NUP49YGL172W YGL149WP53116 101 aa4.31□□□□□ -1.72
NUP49YGL172W MSA2P36157 363 aa4.3□□□□□ -1.72
NUP49YGL172W EDC2P40023 145 aaPredicted RBP4.3□□□□□ -1.72
NUP49YGL172W YJR085CP47131 105 aaKnown RBP4.29□□□□□ -1.72
NUP49YGL172W BSC4P53841 131 aa4.29□□□□□ -1.72
NUP49YGL172W YHR007C-AQ07074 71 aa4.29□□□□□ -1.72
NUP49YGL172W BET1P22804 142 aa4.28□□□□□ -1.72
NUP49YGL172W HYP2P23301 157 aaKnown RBP4.28□□□□□ -1.72
NUP49YGL172W YOR268CQ08734 132 aa4.28□□□□□ -1.72
NUP49YGL172W YGR121W-AQ3E816 71 aa4.28□□□□□ -1.72
NUP49YGL172W SPG1P50088 95 aa4.27□□□□□ -1.73
NUP49YGL172W YDR010CQ12426 110 aa4.27□□□□□ -1.73
NUP49YGL172W YOR072WQ08486 104 aa4.26□□□□□ -1.73
NUP49YGL172W HHF1P02309 103 aaKnown RBP4.25□□□□□ -1.73
NUP49YGL172W RPL36BO14455 100 aaKnown RBP4.24□□□□□ -1.73
NUP49YGL172W SFT1P43682 97 aa4.24□□□□□ -1.73
NUP49YGL172W YMR230W-AQ3E7B5 62 aa4.24□□□□□ -1.73
NUP49YGL172W YHR139C-AO13536 103 aa4.23□□□□□ -1.73
NUP49YGL172W DSE2P38844 325 aa4.23□□□□□ -1.73
NUP49YGL172W YER078W-AQ3E7A2 54 aa4.23□□□□□ -1.73
NUP49YGL172W YJR107C-AP0CT86 78 aa4.22□□□□□ -1.73
NUP49YGL172W PBI2P0CT04 75 aaKnown RBP4.21□□□□□ -1.73
NUP49YGL172W KRE1P17260 313 aa4.21□□□□□ -1.73
NUP49YGL172W YNL184CP53876 108 aa4.21□□□□□ -1.74
NUP49YGL172W TSC3Q3E790 80 aa4.21□□□□□ -1.74
NUP49YGL172W OST2P46964 130 aa4.2□□□□□ -1.74
NUP49YGL172W YBR027CP38220 110 aa4.19□□□□□ -1.74
NUP49YGL172W ATP18P81450 59 aa4.19□□□□□ -1.74
NUP49YGL172W KTI11Q3E840 82 aa4.19□□□□□ -1.74
NUP49YGL172W YFR009W-AP0C5M9 85 aa4.16□□□□□ -1.74
NUP49YGL172W RSM18P40033 138 aa4.16□□□□□ -1.74
NUP49YGL172W COF1Q03048 143 aaKnown RBP4.16□□□□□ -1.74
NUP49YGL172W KSH1Q8TGJ3 72 aa4.15□□□□□ -1.74
NUP49YGL172W RPA12P32529 125 aaKnown RBP4.14□□□□□ -1.75
NUP49YGL172W TDA8Q6B2U8 126 aa4.14□□□□□ -1.75
NUP49YGL172W YHR213W-BQ8TGK1 99 aa4.12□□□□□ -1.75
NUP49YGL172W ICS3P47034 131 aa4.12□□□□□ -1.75
NUP49YGL172W YJL197C-AP0C5P0 93 aa4.11□□□□□ -1.75
NUP49YGL172W YGR039WP53225 103 aa4.11□□□□□ -1.75
NUP49YGL172W RSM19P53733 91 aaPredicted RBP4.11□□□□□ -1.75
NUP49YGL172W SHH4Q06236 168 aa4.11□□□□□ -1.75
NUP49YGL172W YDR381C-AQ3E6R5 114 aa4.11□□□□□ -1.75
NUP49YGL172W YJL133C-AQ3E7A3 74 aa4.1□□□□□ -1.75
NUP49YGL172W EDC1P53080 175 aaPredicted RBP4.09□□□□□ -1.75
NUP49YGL172W YAL063C-AQ3E791 96 aa4.08□□□□□ -1.76
NUP49YGL172W YNL277W-AQ3E7Z0 62 aa4.08□□□□□ -1.76
NUP49YGL172W YLR157W-DP0CE99 70 aa4.07□□□□□ -1.76
NUP49YGL172W RPL38P49167 78 aaKnown RBP4.07□□□□□ -1.76
NUP49YGL172W ECM19Q06011 112 aa4.07□□□□□ -1.76
NUP49YGL172W YLR162WQ06235 118 aa4.07□□□□□ -1.76
NUP49YGL172W MIC10Q96VH5 97 aa4.07□□□□□ -1.76
NUP49YGL172W COX23P38824 151 aa4.06□□□□□ -1.76
NUP49YGL172W ATX1P38636 73 aa4.05□□□□□ -1.76
NUP49YGL172W YBL008W-AQ3E821 79 aa4.05□□□□□ -1.76
NUP49YGL172W YCR085WP25650 117 aa4.04□□□□□ -1.76
NUP49YGL172W YHL005CP38752 130 aa4.04□□□□□ -1.76
NUP49YGL172W TDA2P40045 126 aa4.04□□□□□ -1.76
NUP49YGL172W SBH1P52870 82 aa4.04□□□□□ -1.76
NUP49YGL172W YGL034CP53186 121 aa4.04□□□□□ -1.76
NUP49YGL172W YLR412C-AQ3E742 68 aa4.04□□□□□ -1.76
NUP49YGL172W YOL097W-AQ3E7Y9 61 aa4.04□□□□□ -1.76
NUP49YGL172W YEL045CP32616 141 aa4.04□□□□□ -1.76
NUP49YGL172W YHL018WP38744 120 aaPredicted RBP4.04□□□□□ -1.76
NUP49YGL172W YOL014WQ08110 124 aa4.04□□□□□ -1.76
NUP49YGL172W ISD11Q6Q560 94 aa4.04□□□□□ -1.76
NUP49YGL172W RAD6P06104 172 aa4.03□□□□□ -1.76
NUP49YGL172W INO4P13902 151 aa4.02□□□□□ -1.77
NUP49YGL172W SKI6P46948 246 aaPredicted RBP4.01□□□□□ -1.77
NUP49YGL172W CMC4Q3E7A9 73 aa4.01□□□□□ -1.77
NUP49YGL172W YHL042WP38729 150 aa3.99□□□□□ -1.77
NUP49YGL172W ATP20Q12233 115 aa3.97□□□□□ -1.77
NUP49YGL172W YAL067W-AQ8TGK6 75 aa3.97□□□□□ -1.77
NUP49YGL172W COX7P10174 60 aa3.96□□□□□ -1.77
NUP49YGL172W EMC6Q12431 108 aa3.95□□□□□ -1.78
NUP49YGL172W YCR050CP25630 102 aa3.95□□□□□ -1.78
NUP49YGL172W YGR164WP53291 111 aa3.95□□□□□ -1.78
NUP49YGL172W YLR285C-AQ3E771 56 aa3.94□□□□□ -1.78
NUP49YGL172W YNL122CP53921 115 aaPredicted RBP3.93□□□□□ -1.78
NUP49YGL172W RPL36AP05745 100 aaPredicted RBP3.91□□□□□ -1.78
NUP49YGL172W YAR064WP39563 99 aa3.91□□□□□ -1.78
NUP49YGL172W YFL041W-AQ3E817 63 aa3.89□□□□□ -1.79
NUP49YGL172W YSY6P38374 65 aa3.88□□□□□ -1.79
NUP49YGL172W YDL012CQ12489 107 aa3.88□□□□□ -1.79
NUP49YGL172W YFR032C-BQ8TGU2 87 aa3.88□□□□□ -1.79
NUP49YGL172W YER187WP40102 141 aa3.87□□□□□ -1.79
NUP49YGL172W YHR073W-AP0C5N7 58 aa3.87□□□□□ -1.79
NUP49YGL172W YFL065CP43539 102 aa3.87□□□□□ -1.79
NUP49YGL172W YPR203WQ08994 102 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 103.8 ms