RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W YLR412C-AQ3E742 68 aa3.05□□□□□ -1.92
LCP5YER127W YHL018WP38744 120 aaPredicted RBP3.04□□□□□ -1.92
LCP5YER127W NSE4P43124 402 aa3.04□□□□□ -1.92
LCP5YER127W YLR050CQ12155 161 aaKnown RBP3.04□□□□□ -1.92
LCP5YER127W YLL006W-AQ3E814 58 aa3.04□□□□□ -1.92
LCP5YER127W YNL042W-BQ3E7Z2 85 aa3.03□□□□□ -1.92
LCP5YER127W SCS22Q6Q595 175 aa3.03□□□□□ -1.92
LCP5YER127W COX8P04039 78 aa3.02□□□□□ -1.93
LCP5YER127W CNL1Q06333 122 aa3.02□□□□□ -1.93
LCP5YER127W HPA2Q06592 156 aa3.02□□□□□ -1.93
LCP5YER127W ATP5P09457 212 aa3.01□□□□□ -1.93
LCP5YER127W FYV4P38783 130 aaPredicted RBP3.01□□□□□ -1.93
LCP5YER127W PAU17Q12370 124 aa3.01□□□□□ -1.93
LCP5YER127W YKL044WP36092 106 aa2.99□□□□□ -1.93
LCP5YER127W MRPL11P36521 249 aaPredicted RBP2.99□□□□□ -1.93
LCP5YER127W UGX2P32772 223 aa2.97□□□□□ -1.93
LCP5YER127W MRPS12P53732 153 aa2.97□□□□□ -1.93
LCP5YER127W ARL3Q02804 198 aa2.97□□□□□ -1.93
LCP5YER127W ICY1Q04329 127 aa2.97□□□□□ -1.93
LCP5YER127W ATP20Q12233 115 aa2.97□□□□□ -1.93
LCP5YER127W YJL127C-BQ3E828 52 aa2.97□□□□□ -1.93
LCP5YER127W FYV5P25585 152 aa2.96□□□□□ -1.94
LCP5YER127W CWC27Q02770 301 aa2.96□□□□□ -1.94
LCP5YER127W SFT1P43682 97 aa2.95□□□□□ -1.94
LCP5YER127W YBR230W-AQ3E762 66 aa2.95□□□□□ -1.94
LCP5YER127W YDL022C-AP0C5L6 82 aa2.94□□□□□ -1.94
LCP5YER127W YEL067CP39978 195 aa2.94□□□□□ -1.94
LCP5YER127W BSC4P53841 131 aa2.94□□□□□ -1.94
LCP5YER127W IRC21Q04772 201 aa2.94□□□□□ -1.94
LCP5YER127W YOR072WQ08486 104 aa2.93□□□□□ -1.94
LCP5YER127W COA6Q3E846 104 aa2.93□□□□□ -1.94
LCP5YER127W COX7P10174 60 aa2.92□□□□□ -1.94
LCP5YER127W YHR130CP38834 111 aa2.92□□□□□ -1.94
LCP5YER127W PAU23Q07987 124 aa2.92□□□□□ -1.94
LCP5YER127W MRPL44P19956 98 aa2.91□□□□□ -1.94
LCP5YER127W YHL042WP38729 150 aa2.91□□□□□ -1.94
LCP5YER127W YHL005CP38752 130 aa2.91□□□□□ -1.94
LCP5YER127W RPL36BO14455 100 aaKnown RBP2.9□□□□□ -1.95
LCP5YER127W MSL1P40567 111 aaPredicted RBP2.9□□□□□ -1.95
LCP5YER127W SSS1P35179 80 aa2.89□□□□□ -1.95
LCP5YER127W YBR027CP38220 110 aa2.89□□□□□ -1.95
LCP5YER127W FYV7Q12247 151 aa2.89□□□□□ -1.95
LCP5YER127W NHP2P32495 156 aaPredicted RBP2.88□□□□□ -1.95
LCP5YER127W YGL230CP53074 147 aa2.87□□□□□ -1.95
LCP5YER127W YFL065CP43539 102 aa2.86□□□□□ -1.95
LCP5YER127W YNL122CP53921 115 aaPredicted RBP2.86□□□□□ -1.95
LCP5YER127W YDL157CQ12082 118 aa2.86□□□□□ -1.95
LCP5YER127W YIL134C-AQ45U18 67 aa2.86□□□□□ -1.95
LCP5YER127W YLR157W-DP0CE99 70 aa2.85□□□□□ -1.95
LCP5YER127W RPL37BP51402 88 aaKnown RBP2.85□□□□□ -1.95
LCP5YER127W ELC1Q03071 99 aa2.85□□□□□ -1.95
LCP5YER127W YOL097W-AQ3E7Y9 61 aa2.83□□□□□ -1.96
LCP5YER127W RAD6P06104 172 aa2.82□□□□□ -1.96
LCP5YER127W HUR1P45820 110 aa2.81□□□□□ -1.96
LCP5YER127W POP7P38291 140 aa2.8□□□□□ -1.96
LCP5YER127W YER181CP40097 107 aa2.8□□□□□ -1.96
LCP5YER127W FUN14P18411 198 aa2.79□□□□□ -1.96
LCP5YER127W RSM18P40033 138 aa2.79□□□□□ -1.96
LCP5YER127W NAT5Q08689 176 aa2.79□□□□□ -1.96
LCP5YER127W YOR034C-AQ3E735 80 aa2.79□□□□□ -1.96
LCP5YER127W SEN15Q04675 128 aa2.78□□□□□ -1.96
LCP5YER127W YOR381W-AQ3E804 55 aa2.78□□□□□ -1.96
LCP5YER127W Q0017Q9ZZX8 53 aa2.78□□□□□ -1.96
LCP5YER127W PAI3P01094 68 aa2.76□□□□□ -1.97
LCP5YER127W RSM19P53733 91 aaPredicted RBP2.76□□□□□ -1.97
LCP5YER127W LSM6Q06406 86 aaKnown RBP2.76□□□□□ -1.97
LCP5YER127W YLR363W-AQ3E747 85 aa2.75□□□□□ -1.97
LCP5YER127W YJR107C-AP0CT86 78 aa2.73□□□□□ -1.97
LCP5YER127W GLC8P41818 229 aa2.72□□□□□ -1.97
LCP5YER127W COF1Q03048 143 aaKnown RBP2.72□□□□□ -1.97
LCP5YER127W SAE3P89114 91 aa2.71□□□□□ -1.98
LCP5YER127W YHR213W-BQ8TGK1 99 aa2.71□□□□□ -1.98
LCP5YER127W YOR304C-AO14468 76 aa2.7□□□□□ -1.98
LCP5YER127W YLR296WQ05898 108 aa2.7□□□□□ -1.98
LCP5YER127W MIC10Q96VH5 97 aa2.7□□□□□ -1.98
LCP5YER127W YJL133C-AQ3E7A3 74 aa2.69□□□□□ -1.98
LCP5YER127W RPS28BP0C0X0 67 aaKnown RBP2.68□□□□□ -1.98
LCP5YER127W ATP18P81450 59 aa2.68□□□□□ -1.98
LCP5YER127W RPS28AQ3E7X9 67 aaPredicted RBP2.68□□□□□ -1.98
LCP5YER127W ICS3P47034 131 aa2.67□□□□□ -1.98
LCP5YER127W YFR009W-AP0C5M9 85 aa2.66□□□□□ -1.98
LCP5YER127W LSM8P47093 109 aaKnown RBP2.66□□□□□ -1.98
LCP5YER127W LIP1Q03579 150 aa2.66□□□□□ -1.98
LCP5YER127W YHR073W-AP0C5N7 58 aa2.65□□□□□ -1.99
LCP5YER127W COX23P38824 151 aa2.65□□□□□ -1.99
LCP5YER127W YER187WP40102 141 aa2.65□□□□□ -1.99
LCP5YER127W TDA2P40045 126 aa2.63□□□□□ -1.99
LCP5YER127W YIL102C-AQ2V2P5 75 aa2.62□□□□□ -1.99
LCP5YER127W YLR361C-AQ3E795 98 aa2.62□□□□□ -1.99
LCP5YER127W RPL36AP05745 100 aaPredicted RBP2.61□□□□□ -1.99
LCP5YER127W YDR210WQ03482 75 aa2.61□□□□□ -1.99
LCP5YER127W YCR050CP25630 102 aa2.6□□□□□ -1.99
LCP5YER127W YJR128WP47162 119 aa2.6□□□□□ -1.99
LCP5YER127W RPL37AP49166 88 aaKnown RBP2.6□□□□□ -1.99
LCP5YER127W YGR164WP53291 111 aa2.6□□□□□ -1.99
LCP5YER127W RPL38P49167 78 aaKnown RBP2.58□□□□□ -2
LCP5YER127W YDR381C-AQ3E6R5 114 aa2.58□□□□□ -2
LCP5YER127W YJL009WP47078 108 aa2.57□□□□□ -2
LCP5YER127W YPR203WQ08994 102 aa2.57□□□□□ -2
LCP5YER127W YAR064WP39563 99 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 86.3 ms