RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W YDR274CP87283 123 aa1.69□□□□□ -2.14
SNX41YDR425W YOR314WQ12506 109 aa1.69□□□□□ -2.14
SNX41YDR425W YGR121W-AQ3E816 71 aa1.69□□□□□ -2.14
SNX41YDR425W TDA2P40045 126 aa1.69□□□□□ -2.14
SNX41YDR425W YIR020CP40575 100 aa1.69□□□□□ -2.14
SNX41YDR425W MMS2P53152 137 aa1.69□□□□□ -2.14
SNX41YDR425W PMP3P87284 55 aa1.69□□□□□ -2.14
SNX41YDR425W YDR182W-AQ3E796 67 aa1.69□□□□□ -2.14
SNX41YDR425W RPS30AP0CX33 63 aaKnown RBP1.68□□□□□ -2.14
SNX41YDR425W RPS30BP0CX34 63 aaKnown RBP1.68□□□□□ -2.14
SNX41YDR425W YMR244WQ04018 355 aa1.68□□□□□ -2.14
SNX41YDR425W YOL014WQ08110 124 aa1.68□□□□□ -2.14
SNX41YDR425W YGR035W-AQ45U48 73 aa1.68□□□□□ -2.14
SNX41YDR425W RPB9P27999 122 aa1.67□□□□□ -2.14
SNX41YDR425W TOS8P53147 276 aa1.67□□□□□ -2.14
SNX41YDR425W YGL034CP53186 121 aa1.67□□□□□ -2.14
SNX41YDR425W SMD1Q02260 146 aaPredicted RBP1.67□□□□□ -2.14
SNX41YDR425W MRPS8Q03799 155 aa1.67□□□□□ -2.14
SNX41YDR425W YMR122CQ03879 124 aa1.67□□□□□ -2.14
SNX41YDR425W YPR195CQ06594 109 aa1.67□□□□□ -2.14
SNX41YDR425W TSC3Q3E790 80 aa1.67□□□□□ -2.14
SNX41YDR425W YOR376W-AQ3E805 51 aa1.67□□□□□ -2.14
SNX41YDR425W YMR122W-AQ3E842 84 aa1.67□□□□□ -2.14
SNX41YDR425W BPH1P25356 2167 aa1.67□□□□□ -2.14
SNX41YDR425W TAO3P40468 2376 aa1.67□□□□□ -2.14
SNX41YDR425W RPS11AP0CX47 156 aaKnown RBP1.67□□□□□ -2.14
SNX41YDR425W RPS11BP0CX48 156 aaKnown RBP1.67□□□□□ -2.14
SNX41YDR425W YDR034W-BQ6Q5X2 51 aa1.67□□□□□ -2.14
SNX41YDR425W YAL067W-AQ8TGK6 75 aa1.67□□□□□ -2.14
SNX41YDR425W SEN1Q00416 2231 aaKnown RBP1.66□□□□□ -2.14
SNX41YDR425W YER188C-AP0C0V2 99 aa1.66□□□□□ -2.14
SNX41YDR425W LIP1Q03579 150 aa1.66□□□□□ -2.14
SNX41YDR425W OST5Q92316 86 aa1.66□□□□□ -2.14
SNX41YDR425W RPL29P05747 59 aaPredicted RBP1.65□□□□□ -2.14
SNX41YDR425W YIL102CP40488 101 aa1.65□□□□□ -2.14
SNX41YDR425W MVB12P42939 101 aa1.65□□□□□ -2.14
SNX41YDR425W YPR153WQ06537 140 aa1.65□□□□□ -2.14
SNX41YDR425W YKL065W-AQ2V2P2 73 aa1.65□□□□□ -2.14
SNX41YDR425W YPR010C-AA5Z2X5 72 aa1.65□□□□□ -2.15
SNX41YDR425W COX23P38824 151 aa1.65□□□□□ -2.15
SNX41YDR425W TAR1Q8TGM6 124 aa1.65□□□□□ -2.15
SNX41YDR425W EDC2P40023 145 aaPredicted RBP1.64□□□□□ -2.15
SNX41YDR425W HOR7Q05827 59 aa1.64□□□□□ -2.15
SNX41YDR425W YHR213W-BQ8TGK1 99 aa1.64□□□□□ -2.15
SNX41YDR425W YDR010CQ12426 110 aa1.63□□□□□ -2.15
SNX41YDR425W YOL013W-AP0C272 63 aaPredicted RBP1.63□□□□□ -2.15
SNX41YDR425W AQY2P0CD90 149 aa1.63□□□□□ -2.15
SNX41YDR425W FYV5P25585 152 aa1.63□□□□□ -2.15
SNX41YDR425W SPC1P46965 94 aa1.63□□□□□ -2.15
SNX41YDR425W YDL241WQ07738 123 aa1.63□□□□□ -2.15
SNX41YDR425W YBR230W-AQ3E762 66 aa1.63□□□□□ -2.15
SNX41YDR425W YJL133C-AQ3E7A3 74 aa1.63□□□□□ -2.15
SNX41YDR425W YJL127C-BQ3E828 52 aa1.63□□□□□ -2.15
SNX41YDR425W YML100W-AQ8TGT0 57 aa1.63□□□□□ -2.15
SNX41YDR425W YAR023CD6VPM8 179 aa1.62□□□□□ -2.15
SNX41YDR425W HFA1P32874 2273 aa1.62□□□□□ -2.15
SNX41YDR425W CSF1Q12150 2958 aa1.61□□□□□ -2.15
SNX41YDR425W YBL039W-BP0C268 59 aa1.61□□□□□ -2.15
SNX41YDR425W YCR001WP25347 104 aa1.61□□□□□ -2.15
SNX41YDR425W RPC10P40422 70 aa1.61□□□□□ -2.15
SNX41YDR425W YLR157W-DP0CE99 70 aa1.6□□□□□ -2.15
SNX41YDR425W YAL064WP39711 94 aa1.6□□□□□ -2.15
SNX41YDR425W ECM19Q06011 112 aa1.6□□□□□ -2.15
SNX41YDR425W YJL144WP47009 104 aa1.6□□□□□ -2.15
SNX41YDR425W YIL156W-BQ2V2P4 73 aa1.6□□□□□ -2.15
SNX41YDR425W SDH6Q3E785 79 aa1.6□□□□□ -2.15
SNX41YDR425W YGR240C-AQ3E786 66 aa1.6□□□□□ -2.15
SNX41YDR425W YCR095W-AQ3E787 52 aa1.6□□□□□ -2.15
SNX41YDR425W HUB1Q6Q546 73 aa1.6□□□□□ -2.15
SNX41YDR425W YNL042W-BQ3E7Z2 85 aa1.59□□□□□ -2.15
SNX41YDR425W YLR307C-AQ3E825 87 aa1.59□□□□□ -2.15
SNX41YDR425W YMR001C-AQ8TGS9 76 aa1.59□□□□□ -2.15
SNX41YDR425W RDS3Q06835 107 aaPredicted RBP1.58□□□□□ -2.16
SNX41YDR425W IRA1P18963 3092 aa1.58□□□□□ -2.16
SNX41YDR425W YHR212W-AP0CX91 67 aa1.58□□□□□ -2.16
SNX41YDR425W YHR125WP38831 101 aa1.58□□□□□ -2.16
SNX41YDR425W YGL193CP53097 103 aa1.58□□□□□ -2.16
SNX41YDR425W YHR007C-AQ07074 71 aa1.58□□□□□ -2.16
SNX41YDR425W AUA1P32450 94 aa1.57□□□□□ -2.16
SNX41YDR425W YAR064WP39563 99 aa1.57□□□□□ -2.16
SNX41YDR425W BSC4P53841 131 aa1.57□□□□□ -2.16
SNX41YDR425W Q0032Q9ZZX7 96 aa1.57□□□□□ -2.16
SNX41YDR425W RPL33AP05744 107 aaKnown RBP1.56□□□□□ -2.16
SNX41YDR425W DDR48P18899 430 aaKnown RBP1.56□□□□□ -2.16
SNX41YDR425W YBR027CP38220 110 aa1.56□□□□□ -2.16
SNX41YDR425W RPL33BP41056 107 aaKnown RBP1.56□□□□□ -2.16
SNX41YDR425W SPG1P50088 95 aa1.56□□□□□ -2.16
SNX41YDR425W SPO24Q3E752 67 aa1.56□□□□□ -2.16
SNX41YDR425W TRA1P38811 3744 aa1.56□□□□□ -2.16
SNX41YDR425W URA2P07259 2214 aaKnown RBP1.56□□□□□ -2.16
SNX41YDR425W DDR2P89113 61 aa1.56□□□□□ -2.16
SNX41YDR425W LCL2Q08045 131 aa1.56□□□□□ -2.16
SNX41YDR425W YOR072WQ08486 104 aa1.56□□□□□ -2.16
SNX41YDR425W FMP27Q06179 2628 aa1.56□□□□□ -2.16
SNX41YDR425W YGL149WP53116 101 aa1.55□□□□□ -2.16
SNX41YDR425W YNL122CP53921 115 aaPredicted RBP1.55□□□□□ -2.16
SNX41YDR425W ATP17Q06405 101 aa1.55□□□□□ -2.16
SNX41YDR425W YJL197C-AP0C5P0 93 aa1.54□□□□□ -2.16
SNX41YDR425W YLL066W-BQ8TGJ7 56 aa1.54□□□□□ -2.16
SNX41YDR425W GCN1P33892 2672 aaKnown RBP1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms