RNA–Protein interactions for RNA: YDL113C

ATG20, Transcript of Sorting nexin family member, yeastyeast

Gene ATG20, Length 1,923 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG20YDL113C YFL065CP43539 102 aa3.52□□□□□ -1.85
ATG20YDL113C RPL26BP53221 127 aaKnown RBP3.52□□□□□ -1.85
ATG20YDL113C YPR203WQ08994 102 aa3.52□□□□□ -1.85
ATG20YDL113C YJL127C-BQ3E828 52 aa3.52□□□□□ -1.85
ATG20YDL113C YHR139C-AO13536 103 aa3.51□□□□□ -1.85
ATG20YDL113C YBR230W-AQ3E762 66 aa3.51□□□□□ -1.85
ATG20YDL113C YAL063C-AQ3E791 96 aa3.51□□□□□ -1.85
ATG20YDL113C SKI6P46948 246 aaPredicted RBP3.5□□□□□ -1.85
ATG20YDL113C YDR381C-AQ3E6R5 114 aa3.5□□□□□ -1.85
ATG20YDL113C ECM12O13529 151 aa3.5□□□□□ -1.85
ATG20YDL113C FYV5P25585 152 aa3.5□□□□□ -1.85
ATG20YDL113C YCR085WP25650 117 aa3.5□□□□□ -1.85
ATG20YDL113C EDC1P53080 175 aaPredicted RBP3.5□□□□□ -1.85
ATG20YDL113C YLR307C-AQ3E825 87 aa3.5□□□□□ -1.85
ATG20YDL113C RAD6P06104 172 aa3.49□□□□□ -1.85
ATG20YDL113C YLR156WP0CE96 114 aa3.49□□□□□ -1.85
ATG20YDL113C YLR159WP0CE97 114 aa3.49□□□□□ -1.85
ATG20YDL113C YLR161WP0CE98 114 aa3.49□□□□□ -1.85
ATG20YDL113C YGL041C-BQ3E750 60 aa3.49□□□□□ -1.85
ATG20YDL113C ATP18P81450 59 aa3.48□□□□□ -1.85
ATG20YDL113C BET1P22804 142 aa3.48□□□□□ -1.85
ATG20YDL113C YNL042W-BQ3E7Z2 85 aa3.48□□□□□ -1.85
ATG20YDL113C YFR009W-AP0C5M9 85 aa3.47□□□□□ -1.85
ATG20YDL113C RPL38P49167 78 aaKnown RBP3.46□□□□□ -1.85
ATG20YDL113C TSC3Q3E790 80 aa3.46□□□□□ -1.85
ATG20YDL113C YGL193CP53097 103 aa3.46□□□□□ -1.86
ATG20YDL113C BSC4P53841 131 aa3.46□□□□□ -1.86
ATG20YDL113C DDR2P89113 61 aa3.46□□□□□ -1.86
ATG20YDL113C LCL2Q08045 131 aa3.46□□□□□ -1.86
ATG20YDL113C YHR007C-AQ07074 71 aa3.45□□□□□ -1.86
ATG20YDL113C YFL041W-AQ3E817 63 aa3.45□□□□□ -1.86
ATG20YDL113C GIS2P53849 153 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
ATG20YDL113C KRE1P17260 313 aa3.44□□□□□ -1.86
ATG20YDL113C EDC2P40023 145 aaPredicted RBP3.43□□□□□ -1.86
ATG20YDL113C YNL184CP53876 108 aa3.43□□□□□ -1.86
ATG20YDL113C EMC6Q12431 108 aa3.43□□□□□ -1.86
ATG20YDL113C YBL008W-AQ3E821 79 aa3.43□□□□□ -1.86
ATG20YDL113C GAT4P40569 121 aa3.42□□□□□ -1.86
ATG20YDL113C ICS3P47034 131 aa3.42□□□□□ -1.86
ATG20YDL113C RPL36BO14455 100 aaKnown RBP3.42□□□□□ -1.86
ATG20YDL113C RPS28BP0C0X0 67 aaKnown RBP3.42□□□□□ -1.86
ATG20YDL113C YLR285C-AQ3E771 56 aa3.42□□□□□ -1.86
ATG20YDL113C YMR230W-AQ3E7B5 62 aa3.42□□□□□ -1.86
ATG20YDL113C RPS28AQ3E7X9 67 aaPredicted RBP3.42□□□□□ -1.86
ATG20YDL113C TDA2P40045 126 aa3.41□□□□□ -1.86
ATG20YDL113C SFT1P43682 97 aa3.41□□□□□ -1.86
ATG20YDL113C YGR039WP53225 103 aa3.41□□□□□ -1.86
ATG20YDL113C YOR072WQ08486 104 aa3.41□□□□□ -1.86
ATG20YDL113C YHR213W-BQ8TGK1 99 aa3.41□□□□□ -1.86
ATG20YDL113C ECM19Q06011 112 aa3.4□□□□□ -1.86
ATG20YDL113C YOL014WQ08110 124 aa3.4□□□□□ -1.86
ATG20YDL113C YBL112CQ3E7Y4 105 aa3.4□□□□□ -1.86
ATG20YDL113C YER039C-AP0CD97 72 aa3.39□□□□□ -1.87
ATG20YDL113C YHL042WP38729 150 aa3.39□□□□□ -1.87
ATG20YDL113C RSM19P53733 91 aaPredicted RBP3.39□□□□□ -1.87
ATG20YDL113C COF1Q03048 143 aaKnown RBP3.39□□□□□ -1.87
ATG20YDL113C RSM18P40033 138 aa3.38□□□□□ -1.87
ATG20YDL113C SHH4Q06236 168 aa3.38□□□□□ -1.87
ATG20YDL113C YJL133C-AQ3E7A3 74 aa3.38□□□□□ -1.87
ATG20YDL113C YDR119W-AQ2V2P9 66 aa3.38□□□□□ -1.87
ATG20YDL113C YHL018WP38744 120 aaPredicted RBP3.36□□□□□ -1.87
ATG20YDL113C COX23P38824 151 aa3.36□□□□□ -1.87
ATG20YDL113C MDN1Q12019 4910 aaKnown RBP3.36□□□□□ -1.87
ATG20YDL113C YSY6P38374 65 aa3.36□□□□□ -1.87
ATG20YDL113C LCL1Q02786 101 aa3.36□□□□□ -1.87
ATG20YDL113C ATP20Q12233 115 aa3.36□□□□□ -1.87
ATG20YDL113C YAL067W-AQ8TGK6 75 aa3.36□□□□□ -1.87
ATG20YDL113C YBR027CP38220 110 aa3.35□□□□□ -1.87
ATG20YDL113C TDA8Q6B2U8 126 aa3.35□□□□□ -1.87
ATG20YDL113C YGR121W-AQ3E816 71 aa3.34□□□□□ -1.88
ATG20YDL113C MIC10Q96VH5 97 aa3.34□□□□□ -1.88
ATG20YDL113C DDR48P18899 430 aaKnown RBP3.33□□□□□ -1.88
ATG20YDL113C YLR162WQ06235 118 aa3.33□□□□□ -1.88
ATG20YDL113C YEL045CP32616 141 aa3.32□□□□□ -1.88
ATG20YDL113C YFR032C-BQ8TGU2 87 aa3.32□□□□□ -1.88
ATG20YDL113C YGL149WP53116 101 aa3.31□□□□□ -1.88
ATG20YDL113C YJL197C-AP0C5P0 93 aa3.31□□□□□ -1.88
ATG20YDL113C SPG1P50088 95 aa3.31□□□□□ -1.88
ATG20YDL113C YOR268CQ08734 132 aa3.31□□□□□ -1.88
ATG20YDL113C YPL038W-AQ3E7B4 63 aa3.31□□□□□ -1.88
ATG20YDL113C YCR050CP25630 102 aa3.28□□□□□ -1.88
ATG20YDL113C NOP10Q6Q547 58 aaPredicted RBP3.28□□□□□ -1.88
ATG20YDL113C YDR246W-AQ3E763 66 aa3.27□□□□□ -1.89
ATG20YDL113C YOR304C-AO14468 76 aa3.26□□□□□ -1.89
ATG20YDL113C YER187WP40102 141 aa3.26□□□□□ -1.89
ATG20YDL113C YOR314WQ12506 109 aa3.26□□□□□ -1.89
ATG20YDL113C YIL102CP40488 101 aa3.25□□□□□ -1.89
ATG20YDL113C YLR361C-AQ3E795 98 aa3.25□□□□□ -1.89
ATG20YDL113C YLR157W-DP0CE99 70 aa3.25□□□□□ -1.89
ATG20YDL113C YAR064WP39563 99 aa3.24□□□□□ -1.89
ATG20YDL113C AIM4P38305 123 aaPredicted RBP3.23□□□□□ -1.89
ATG20YDL113C YOL097W-AQ3E7Y9 61 aa3.23□□□□□ -1.89
ATG20YDL113C TOM6P33448 61 aa3.22□□□□□ -1.89
ATG20YDL113C LIP1Q03579 150 aa3.22□□□□□ -1.89
ATG20YDL113C RPL36AP05745 100 aaPredicted RBP3.21□□□□□ -1.9
ATG20YDL113C KTI11Q3E840 82 aa3.21□□□□□ -1.9
ATG20YDL113C YOL013W-AP0C272 63 aaPredicted RBP3.19□□□□□ -1.9
ATG20YDL113C YHR125WP38831 101 aa3.19□□□□□ -1.9
ATG20YDL113C YDL012CQ12489 107 aa3.19□□□□□ -1.9
ATG20YDL113C YOL166W-AQ8TGJ1 51 aa3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms