RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W PAU14P0CE89 120 aa2.96□□□□□ -1.94
KIN28YDL108W YJR146WP47174 117 aa2.96□□□□□ -1.94
KIN28YDL108W YBR219CP38317 127 aa2.95□□□□□ -1.94
KIN28YDL108W PAU20Q08322 120 aa2.95□□□□□ -1.94
KIN28YDL108W YGL041C-BQ3E750 60 aa2.95□□□□□ -1.94
KIN28YDL108W LCL2Q08045 131 aa2.94□□□□□ -1.94
KIN28YDL108W VMR1P38735 1592 aa2.93□□□□□ -1.94
KIN28YDL108W YDL022C-AP0C5L6 82 aa2.93□□□□□ -1.94
KIN28YDL108W MRPS12P53732 153 aa2.93□□□□□ -1.94
KIN28YDL108W BRR2P32639 2163 aaKnown RBP2.93□□□□□ -1.94
KIN28YDL108W CCW12Q12127 133 aa2.92□□□□□ -1.94
KIN28YDL108W DSE2P38844 325 aa2.91□□□□□ -1.94
KIN28YDL108W YNL042W-BQ3E7Z2 85 aa2.91□□□□□ -1.94
KIN28YDL108W TAR1Q8TGM6 124 aa2.91□□□□□ -1.94
KIN28YDL108W NUP192P47054 1683 aa2.91□□□□□ -1.94
KIN28YDL108W DNF3Q12674 1656 aa2.91□□□□□ -1.94
KIN28YDL108W URB1P34241 1764 aaKnown RBP2.9□□□□□ -1.94
KIN28YDL108W YCR001WP25347 104 aa2.89□□□□□ -1.95
KIN28YDL108W YOL166W-AQ8TGJ1 51 aa2.89□□□□□ -1.95
KIN28YDL108W ATP17Q06405 101 aa2.88□□□□□ -1.95
KIN28YDL108W YGR240C-AQ3E786 66 aa2.87□□□□□ -1.95
KIN28YDL108W YOR032W-AQ8TGS1 66 aa2.87□□□□□ -1.95
KIN28YDL108W RPS30AP0CX33 63 aaKnown RBP2.86□□□□□ -1.95
KIN28YDL108W RPS30BP0CX34 63 aaKnown RBP2.86□□□□□ -1.95
KIN28YDL108W EDC1P53080 175 aaPredicted RBP2.86□□□□□ -1.95
KIN28YDL108W HUB1Q6Q546 73 aa2.86□□□□□ -1.95
KIN28YDL108W YEL008WP40001 126 aa2.85□□□□□ -1.95
KIN28YDL108W YKL018C-AQ3E7A7 99 aa2.85□□□□□ -1.95
KIN28YDL108W BUD3P25558 1636 aa2.84□□□□□ -1.95
KIN28YDL108W ACC1Q00955 2233 aaKnown RBP2.83□□□□□ -1.96
KIN28YDL108W YLR255CO13574 117 aa2.83□□□□□ -1.96
KIN28YDL108W YJL009WP47078 108 aa2.83□□□□□ -1.96
KIN28YDL108W YMR122W-AQ3E842 84 aa2.83□□□□□ -1.96
KIN28YDL108W AQY2P0CD90 149 aa2.82□□□□□ -1.96
KIN28YDL108W YOR192C-CQ3E736 78 aa2.82□□□□□ -1.96
KIN28YDL108W FAB1P34756 2278 aa2.81□□□□□ -1.96
KIN28YDL108W YCL042WP25572 119 aa2.81□□□□□ -1.96
KIN28YDL108W AGA2P32781 87 aa2.81□□□□□ -1.96
KIN28YDL108W YNL122CP53921 115 aaPredicted RBP2.81□□□□□ -1.96
KIN28YDL108W YOR034C-AQ3E735 80 aa2.8□□□□□ -1.96
KIN28YDL108W YOL097W-AQ3E7Y9 61 aa2.8□□□□□ -1.96
KIN28YDL108W YIL086CP40503 102 aa2.78□□□□□ -1.96
KIN28YDL108W YNL190WP53872 204 aa2.78□□□□□ -1.96
KIN28YDL108W MGR2Q02889 113 aa2.78□□□□□ -1.96
KIN28YDL108W YMR007WQ03675 126 aa2.77□□□□□ -1.97
KIN28YDL108W BLM10P43583 2143 aa2.76□□□□□ -1.97
KIN28YDL108W SGF11Q03067 99 aa2.76□□□□□ -1.97
KIN28YDL108W YBR201C-AQ2V2Q3 67 aa2.75□□□□□ -1.97
KIN28YDL108W YNL146C-AQ3E7Z1 64 aa2.75□□□□□ -1.97
KIN28YDL108W YLR146W-AQ2V2P1 62 aa2.74□□□□□ -1.97
KIN28YDL108W YPR096CO13587 100 aa2.73□□□□□ -1.97
KIN28YDL108W SHU1P38751 150 aa2.73□□□□□ -1.97
KIN28YDL108W ATP18P81450 59 aa2.73□□□□□ -1.97
KIN28YDL108W YMR141CP40211 102 aa2.71□□□□□ -1.98
KIN28YDL108W Q0032Q9ZZX7 96 aa2.71□□□□□ -1.98
KIN28YDL108W FIG2P25653 1609 aa2.71□□□□□ -1.98
KIN28YDL108W YJR107C-AP0CT86 78 aa2.7□□□□□ -1.98
KIN28YDL108W LCL1Q02786 101 aa2.7□□□□□ -1.98
KIN28YDL108W SDH6Q3E785 79 aa2.7□□□□□ -1.98
KIN28YDL108W YMR001C-AQ8TGS9 76 aa2.7□□□□□ -1.98
KIN28YDL108W MVB12P42939 101 aa2.68□□□□□ -1.98
KIN28YDL108W COX7P10174 60 aa2.67□□□□□ -1.98
KIN28YDL108W YOR072WQ08486 104 aa2.67□□□□□ -1.98
KIN28YDL108W BEM2P39960 2167 aaKnown RBP2.67□□□□□ -1.98
KIN28YDL108W YHR086W-AQ3E746 53 aa2.66□□□□□ -1.98
KIN28YDL108W POL2P21951 2222 aaKnown RBP2.65□□□□□ -1.99
KIN28YDL108W YLR157W-DP0CE99 70 aa2.64□□□□□ -1.99
KIN28YDL108W YBL039W-BP0C268 59 aa2.63□□□□□ -1.99
KIN28YDL108W YOR011W-AQ3E807 68 aa2.63□□□□□ -1.99
KIN28YDL108W SEC16P48415 2195 aaKnown RBP2.63□□□□□ -1.99
KIN28YDL108W TOS6P48560 102 aa2.61□□□□□ -1.99
KIN28YDL108W YBR200W-AQ3E755 54 aa2.61□□□□□ -1.99
KIN28YDL108W YAR064WP39563 99 aa2.6□□□□□ -1.99
KIN28YDL108W YPR108W-AQ3E7B3 70 aa2.6□□□□□ -1.99
KIN28YDL108W HUG1Q6Q5K6 68 aa2.6□□□□□ -1.99
KIN28YDL108W YJR128WP47162 119 aa2.59□□□□□ -1.99
KIN28YDL108W YHR212W-AP0CX91 67 aa2.57□□□□□ -2
KIN28YDL108W COA2Q3E823 68 aa2.56□□□□□ -2
KIN28YDL108W YPR010C-AA5Z2X5 72 aa2.55□□□□□ -2
KIN28YDL108W COX9P07255 59 aa2.55□□□□□ -2
KIN28YDL108W YOL013W-AP0C272 63 aaPredicted RBP2.55□□□□□ -2
KIN28YDL108W RPL38P49167 78 aaKnown RBP2.55□□□□□ -2
KIN28YDL108W HFA1P32874 2273 aa2.54□□□□□ -2
KIN28YDL108W YIL102CP40488 101 aa2.53□□□□□ -2
KIN28YDL108W YGR025WP53216 100 aa2.53□□□□□ -2
KIN28YDL108W HKR1P41809 1802 aa2.53□□□□□ -2
KIN28YDL108W YOR394C-AQ8TGJ0 55 aa2.52□□□□□ -2.01
KIN28YDL108W YFR009W-AP0C5M9 85 aa2.48□□□□□ -2.01
KIN28YDL108W YBR230W-AQ3E762 66 aa2.48□□□□□ -2.01
KIN28YDL108W YBR072C-AQ3E794 53 aa2.48□□□□□ -2.01
KIN28YDL108W HHY1P39982 102 aa2.47□□□□□ -2.01
KIN28YDL108W RPS27AP35997 82 aaKnown RBP2.46□□□□□ -2.02
KIN28YDL108W RPC10P40422 70 aa2.46□□□□□ -2.02
KIN28YDL108W OLI1P61829 76 aa2.42□□□□□ -2.02
KIN28YDL108W AUA1P32450 94 aa2.41□□□□□ -2.02
KIN28YDL108W SEN1Q00416 2231 aaKnown RBP2.38□□□□□ -2.03
KIN28YDL108W URA2P07259 2214 aaKnown RBP2.37□□□□□ -2.03
KIN28YDL108W YOR008C-AQ3E7B9 74 aa2.37□□□□□ -2.03
KIN28YDL108W YHR213W-BQ8TGK1 99 aa2.37□□□□□ -2.03
KIN28YDL108W YLR307C-AQ3E825 87 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 68 ms