RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C RPS30AP0CX33 63 aaKnown RBP0.78□□□□□ -2.28
VAM6YDL077C RPS30BP0CX34 63 aaKnown RBP0.78□□□□□ -2.28
VAM6YDL077C YIR020CP40575 100 aa0.78□□□□□ -2.28
VAM6YDL077C RPL15BP54780 204 aaPredicted RBP0.78□□□□□ -2.28
VAM6YDL077C PMP3P87284 55 aa0.78□□□□□ -2.28
VAM6YDL077C API2Q04413 109 aa0.78□□□□□ -2.28
VAM6YDL077C ECM19Q06011 112 aa0.78□□□□□ -2.28
VAM6YDL077C YPR153WQ06537 140 aa0.78□□□□□ -2.28
VAM6YDL077C YPR013CQ12145 317 aa0.78□□□□□ -2.28
VAM6YDL077C YBR230W-AQ3E762 66 aa0.78□□□□□ -2.28
VAM6YDL077C MRPL38P35996 138 aaPredicted RBP0.78□□□□□ -2.29
VAM6YDL077C RPS27AP35997 82 aaKnown RBP0.78□□□□□ -2.29
VAM6YDL077C RPS27BP38711 82 aa0.78□□□□□ -2.29
VAM6YDL077C EDC1P53080 175 aaPredicted RBP0.78□□□□□ -2.29
VAM6YDL077C YGR025WP53216 100 aa0.78□□□□□ -2.29
VAM6YDL077C DDR2P89113 61 aa0.78□□□□□ -2.29
VAM6YDL077C YGR240C-AQ3E786 66 aa0.78□□□□□ -2.29
VAM6YDL077C YLL006W-AQ3E814 58 aa0.78□□□□□ -2.29
VAM6YDL077C YMR122W-AQ3E842 84 aa0.78□□□□□ -2.29
VAM6YDL077C YCR041WP37265 110 aa0.77□□□□□ -2.29
VAM6YDL077C YBR219CP38317 127 aa0.77□□□□□ -2.29
VAM6YDL077C YPL278CQ08990 100 aa0.77□□□□□ -2.29
VAM6YDL077C YCR095W-AQ3E787 52 aa0.77□□□□□ -2.29
VAM6YDL077C YOR011W-AQ3E807 68 aa0.77□□□□□ -2.29
VAM6YDL077C RRT15Q3E811 62 aa0.77□□□□□ -2.29
VAM6YDL077C YMR001C-AQ8TGS9 76 aa0.77□□□□□ -2.29
VAM6YDL077C YFR032C-BQ8TGU2 87 aa0.77□□□□□ -2.29
VAM6YDL077C NUM1Q00402 2748 aa0.77□□□□□ -2.29
VAM6YDL077C YHR125WP38831 101 aa0.77□□□□□ -2.29
VAM6YDL077C KRE9P39005 276 aa0.77□□□□□ -2.29
VAM6YDL077C YAL064WP39711 94 aa0.77□□□□□ -2.29
VAM6YDL077C RPC10P40422 70 aa0.77□□□□□ -2.29
VAM6YDL077C SIP18P50263 79 aa0.77□□□□□ -2.29
VAM6YDL077C SNA2P56508 79 aa0.77□□□□□ -2.29
VAM6YDL077C VAM10Q08474 114 aa0.77□□□□□ -2.29
VAM6YDL077C YOR268CQ08734 132 aa0.77□□□□□ -2.29
VAM6YDL077C YER175W-AQ8TGU4 54 aa0.77□□□□□ -2.29
VAM6YDL077C YBL039W-BP0C268 59 aa0.76□□□□□ -2.29
VAM6YDL077C AQY2P0CD90 149 aa0.76□□□□□ -2.29
VAM6YDL077C DDR48P18899 430 aaKnown RBP0.76□□□□□ -2.29
VAM6YDL077C YBL081WP38180 368 aaKnown RBP0.76□□□□□ -2.29
VAM6YDL077C YBR027CP38220 110 aa0.76□□□□□ -2.29
VAM6YDL077C YER084WP40057 128 aa0.76□□□□□ -2.29
VAM6YDL077C WWM1P43582 211 aaKnown RBP0.76□□□□□ -2.29
VAM6YDL077C YDR114CQ04597 100 aa0.76□□□□□ -2.29
VAM6YDL077C SPC1P46965 94 aa0.76□□□□□ -2.29
VAM6YDL077C YNL122CP53921 115 aaPredicted RBP0.76□□□□□ -2.29
VAM6YDL077C YNL042W-BQ3E7Z2 85 aa0.76□□□□□ -2.29
VAM6YDL077C YNL208WP40159 199 aaKnown RBP0.75□□□□□ -2.29
VAM6YDL077C MVB12P42939 101 aa0.75□□□□□ -2.29
VAM6YDL077C LCL2Q08045 131 aa0.75□□□□□ -2.29
VAM6YDL077C YMR105W-AQ8TGS8 64 aa0.75□□□□□ -2.29
VAM6YDL077C RTC6O14464 93 aa0.75□□□□□ -2.29
VAM6YDL077C YDR524C-BQ3E6R4 66 aa0.75□□□□□ -2.29
VAM6YDL077C YHR213W-BQ8TGK1 99 aa0.75□□□□□ -2.29
VAM6YDL077C YLR157W-DP0CE99 70 aa0.75□□□□□ -2.29
VAM6YDL077C NCE102Q12207 173 aaRIP-Chip data0.75□□□□□ -2.29not detected
VAM6YDL077C YJL133C-AQ3E7A3 74 aa0.75□□□□□ -2.29
VAM6YDL077C YIL046W-AQ3E7Z4 54 aa0.75□□□□□ -2.29
VAM6YDL077C YOR376W-AQ3E805 51 aa0.75□□□□□ -2.29
VAM6YDL077C YJL127C-BQ3E828 52 aa0.75□□□□□ -2.29
VAM6YDL077C FYV12Q08559 129 aa0.74□□□□□ -2.29
VAM6YDL077C CDC39P25655 2108 aaKnown RBP0.74□□□□□ -2.29
VAM6YDL077C BEM2P39960 2167 aaKnown RBP0.74□□□□□ -2.29
VAM6YDL077C RPL38P49167 78 aaKnown RBP0.74□□□□□ -2.29
VAM6YDL077C YDR010CQ12426 110 aa0.74□□□□□ -2.29
VAM6YDL077C YER145C-AA0A023PYF4 145 aa0.73□□□□□ -2.29
VAM6YDL077C COX8P04039 78 aa0.73□□□□□ -2.29
VAM6YDL077C YGL014C-AP0C5N1 53 aa0.73□□□□□ -2.29
VAM6YDL077C YHR073W-AP0C5N7 58 aa0.73□□□□□ -2.29
VAM6YDL077C YAR064WP39563 99 aa0.73□□□□□ -2.29
VAM6YDL077C YDL012CQ12489 107 aa0.73□□□□□ -2.29
VAM6YDL077C YGL041C-BQ3E750 60 aa0.73□□□□□ -2.29
VAM6YDL077C AUA1P32450 94 aa0.73□□□□□ -2.29
VAM6YDL077C HUA1P40325 198 aa0.73□□□□□ -2.29
VAM6YDL077C YLR255CO13574 117 aa0.73□□□□□ -2.29
VAM6YDL077C RPL33AP05744 107 aaKnown RBP0.73□□□□□ -2.29
VAM6YDL077C RPL33BP41056 107 aaKnown RBP0.73□□□□□ -2.29
VAM6YDL077C YFL067WP43537 175 aa0.73□□□□□ -2.29
VAM6YDL077C YEL014CP39999 101 aa0.72□□□□□ -2.29
VAM6YDL077C YIL156W-BQ2V2P4 73 aa0.72□□□□□ -2.29
VAM6YDL077C YIL102CP40488 101 aa0.72□□□□□ -2.29
VAM6YDL077C YDR210WQ03482 75 aa0.72□□□□□ -2.29
VAM6YDL077C YOR034C-AQ3E735 80 aa0.72□□□□□ -2.29
VAM6YDL077C YGR146C-AQ8TGT9 53 aa0.72□□□□□ -2.29
VAM6YDL077C Q0032Q9ZZX7 96 aa0.72□□□□□ -2.29
VAM6YDL077C SEC16P48415 2195 aaKnown RBP0.72□□□□□ -2.29
VAM6YDL077C YJL009WP47078 108 aa0.71□□□□□ -2.3
VAM6YDL077C RPL37BP51402 88 aaKnown RBP0.71□□□□□ -2.3
VAM6YDL077C YOR072WQ08486 104 aa0.71□□□□□ -2.3
VAM6YDL077C YOR316C-AQ3E806 69 aa0.71□□□□□ -2.3
VAM6YDL077C RPL43AP0CX25 92 aaKnown RBP0.71□□□□□ -2.3
VAM6YDL077C RPL43BP0CX26 92 aa0.71□□□□□ -2.3
VAM6YDL077C BLM10P43583 2143 aa0.71□□□□□ -2.3
VAM6YDL077C RPL39P04650 51 aa0.71□□□□□ -2.3
VAM6YDL077C COX7P10174 60 aa0.71□□□□□ -2.3
VAM6YDL077C IGD1P43598 195 aa0.71□□□□□ -2.3
VAM6YDL077C OLI1P61829 76 aa0.7□□□□□ -2.3
VAM6YDL077C LCL1Q02786 101 aa0.7□□□□□ -2.3
VAM6YDL077C SGF11Q03067 99 aa0.7□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 123.7 ms