RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W YOR343CQ12484 108 aa0.05□□□□□ -2.4
UBC9YDL064W YOR011W-AQ3E807 68 aa0.05□□□□□ -2.4
UBC9YDL064W LHP1P33399 275 aaKnown RBP0.04□□□□□ -2.4
UBC9YDL064W MRPL38P35996 138 aaPredicted RBP0.03□□□□□ -2.4
UBC9YDL064W YGR164WP53291 111 aa0.03□□□□□ -2.4
UBC9YDL064W SGF11Q03067 99 aa0.03□□□□□ -2.4
UBC9YDL064W YLL066W-BQ8TGJ7 56 aa0.03□□□□□ -2.4
UBC9YDL064W UBC4P15731 148 aa0.02□□□□□ -2.41
UBC9YDL064W TIM12P32830 109 aa0.02□□□□□ -2.41
UBC9YDL064W VMA21P41806 77 aa0.02□□□□□ -2.41
UBC9YDL064W RPS12P48589 143 aaKnown RBP0.02□□□□□ -2.41
UBC9YDL064W YOR289WQ12012 251 aaPredicted RBP0.02□□□□□ -2.41
UBC9YDL064W YOR192C-CQ3E736 78 aa0.02□□□□□ -2.41
UBC9YDL064W YOS1Q3E834 85 aa0.02□□□□□ -2.41
UBC9YDL064W MIC10Q96VH5 97 aa0.02□□□□□ -2.41
UBC9YDL064W YOR304C-AO14468 76 aa0□□□□□ -2.41
UBC9YDL064W RGI1P40043 161 aaPredicted RBP0□□□□□ -2.41
UBC9YDL064W AIM19P40502 157 aa0□□□□□ -2.41
UBC9YDL064W SNA2P56508 79 aa-0.01□□□□□ -2.41
UBC9YDL064W YDR029WQ12111 104 aa-0.01□□□□□ -2.41
UBC9YDL064W YKL018C-AQ3E7A7 99 aa-0.01□□□□□ -2.41
UBC9YDL064W YOL131WQ08270 108 aa-0.02□□□□□ -2.41
UBC9YDL064W UBC5P15732 148 aa-0.03□□□□□ -2.41
UBC9YDL064W SPC1P46965 94 aa-0.03□□□□□ -2.41
UBC9YDL064W NHP10Q03435 203 aa-0.03□□□□□ -2.41
UBC9YDL064W SRB6P32570 121 aa-0.04□□□□□ -2.42
UBC9YDL064W PDX3P38075 228 aaKnown RBP-0.04□□□□□ -2.42
UBC9YDL064W KSH1Q8TGJ3 72 aa-0.04□□□□□ -2.42
UBC9YDL064W EMC5P40540 141 aa-0.05□□□□□ -2.42
UBC9YDL064W MRX7P53869 86 aa-0.05□□□□□ -2.42
UBC9YDL064W ICY1Q04329 127 aa-0.05□□□□□ -2.42
UBC9YDL064W YCR095W-AQ3E787 52 aa-0.05□□□□□ -2.42
UBC9YDL064W MHF2Q3E829 80 aa-0.05□□□□□ -2.42
UBC9YDL064W YCR075W-AQ3E830 75 aa-0.05□□□□□ -2.42
UBC9YDL064W ECM12O13529 151 aa-0.06□□□□□ -2.42
UBC9YDL064W PAU6P0CE90 120 aa-0.06□□□□□ -2.42
UBC9YDL064W PAU18P0CE91 120 aa-0.06□□□□□ -2.42
UBC9YDL064W CWP2P43497 92 aa-0.06□□□□□ -2.42
UBC9YDL064W PAU5P43575 122 aa-0.06□□□□□ -2.42
UBC9YDL064W RUB1Q03919 77 aa-0.06□□□□□ -2.42
UBC9YDL064W YMR103CQ04436 120 aa-0.06□□□□□ -2.42
UBC9YDL064W LSM2P38203 95 aaKnown RBP-0.07□□□□□ -2.42
UBC9YDL064W GNA1P43577 159 aaPredicted RBP-0.07□□□□□ -2.42
UBC9YDL064W POC4Q12245 148 aaPredicted RBP-0.07□□□□□ -2.42
UBC9YDL064W YHL005CP38752 130 aa-0.08□□□□□ -2.42
UBC9YDL064W SPI1P40092 148 aa-0.08□□□□□ -2.42
UBC9YDL064W RPC10P40422 70 aa-0.08□□□□□ -2.42
UBC9YDL064W Q0017Q9ZZX8 53 aa-0.08□□□□□ -2.42
UBC9YDL064W YBL071CP38185 102 aa-0.09□□□□□ -2.42
UBC9YDL064W YBR016WP38216 128 aa-0.09□□□□□ -2.42
UBC9YDL064W YMR082CQ04276 118 aa-0.09□□□□□ -2.42
UBC9YDL064W YNL042W-BQ3E7Z2 85 aa-0.09□□□□□ -2.42
UBC9YDL064W YNR034W-AQ3E841 98 aa-0.09□□□□□ -2.42
UBC9YDL064W Q0032Q9ZZX7 96 aa-0.09□□□□□ -2.42
UBC9YDL064W YNL198CP40166 100 aa-0.1□□□□□ -2.43
UBC9YDL064W YBR200W-AQ3E755 54 aa-0.1□□□□□ -2.43
UBC9YDL064W YPR108W-AQ3E7B3 70 aa-0.1□□□□□ -2.43
UBC9YDL064W YMR122W-AQ3E842 84 aa-0.1□□□□□ -2.43
UBC9YDL064W YHR073W-AP0C5N7 58 aa-0.11□□□□□ -2.43
UBC9YDL064W COX7P10174 60 aa-0.11□□□□□ -2.43
UBC9YDL064W YBR090CP38253 122 aa-0.11□□□□□ -2.43
UBC9YDL064W TOS6P48560 102 aa-0.11□□□□□ -2.43
UBC9YDL064W BSC4P53841 131 aa-0.11□□□□□ -2.43
UBC9YDL064W PMP3P87284 55 aa-0.11□□□□□ -2.43
UBC9YDL064W SCP1Q08873 200 aa-0.11□□□□□ -2.43
UBC9YDL064W YPR010C-AA5Z2X5 72 aa-0.12□□□□□ -2.43
UBC9YDL064W YBL044WP38194 122 aa-0.12□□□□□ -2.43
UBC9YDL064W ERI1P62651 68 aaKnown RBP-0.12□□□□□ -2.43
UBC9YDL064W DDR2P89113 61 aa-0.12□□□□□ -2.43
UBC9YDL064W YPR145C-AQ2V2P0 78 aa-0.12□□□□□ -2.43
UBC9YDL064W YGL258W-AQ3E740 77 aa-0.12□□□□□ -2.43
UBC9YDL064W YAL065CO13511 128 aa-0.13□□□□□ -2.43
UBC9YDL064W YFR009W-AP0C5M9 85 aa-0.13□□□□□ -2.43
UBC9YDL064W YBR032WP38223 100 aa-0.13□□□□□ -2.43
UBC9YDL064W RSM18P40033 138 aa-0.13□□□□□ -2.43
UBC9YDL064W SMX2P40204 77 aaKnown RBP-0.13□□□□□ -2.43
UBC9YDL064W EDC1P53080 175 aaPredicted RBP-0.13□□□□□ -2.43
UBC9YDL064W YDR042CQ03205 200 aa-0.13□□□□□ -2.43
UBC9YDL064W YGR121W-AQ3E816 71 aa-0.13□□□□□ -2.43
UBC9YDL064W YBR292CP38357 123 aa-0.14□□□□□ -2.43
UBC9YDL064W COA2Q3E823 68 aa-0.14□□□□□ -2.43
UBC9YDL064W YBL039W-BP0C268 59 aa-0.15□□□□□ -2.43
UBC9YDL064W ATX1P38636 73 aa-0.15□□□□□ -2.43
UBC9YDL064W YHR050W-AQ05451 56 aa-0.15□□□□□ -2.43
UBC9YDL064W PAU20Q08322 120 aa-0.15□□□□□ -2.43
UBC9YDL064W COX9P07255 59 aa-0.16□□□□□ -2.44
UBC9YDL064W MRP17P28778 131 aa-0.16□□□□□ -2.44
UBC9YDL064W YMR090WQ04304 227 aaKnown RBP-0.16□□□□□ -2.44
UBC9YDL064W YBR230W-AQ3E762 66 aa-0.16□□□□□ -2.44
UBC9YDL064W YMR175W-AQ3E766 64 aa-0.16□□□□□ -2.44
UBC9YDL064W RPS30AP0CX33 63 aaKnown RBP-0.17□□□□□ -2.44
UBC9YDL064W RPS30BP0CX34 63 aaKnown RBP-0.17□□□□□ -2.44
UBC9YDL064W SWM2P40342 146 aa-0.17□□□□□ -2.44
UBC9YDL064W YKL023C-AQ2V2P3 75 aa-0.17□□□□□ -2.44
UBC9YDL064W YOR316C-AQ3E806 69 aa-0.17□□□□□ -2.44
UBC9YDL064W YLR342W-AQ3E810 57 aa-0.17□□□□□ -2.44
UBC9YDL064W YLL006W-AQ3E814 58 aa-0.17□□□□□ -2.44
UBC9YDL064W YJL127C-BQ3E828 52 aa-0.17□□□□□ -2.44
UBC9YDL064W YLR157W-DP0CE99 70 aa-0.18□□□□□ -2.44
UBC9YDL064W FPR2P32472 135 aa-0.18□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 80.3 ms