RNA–Protein interactions for RNA: YCR081W

SRB8, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB8, Length 4,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB8YCR081W YLL006W-AQ3E814 58 aa1.92□□□□□ -2.1
SRB8YCR081W YOL013W-AP0C272 63 aaPredicted RBP1.92□□□□□ -2.1
SRB8YCR081W LEE1Q02799 301 aaKnown RBP1.92□□□□□ -2.1
SRB8YCR081W YPR010C-AA5Z2X5 72 aa1.91□□□□□ -2.1
SRB8YCR081W EDC2P40023 145 aaPredicted RBP1.91□□□□□ -2.1
SRB8YCR081W HUA1P40325 198 aa1.91□□□□□ -2.1
SRB8YCR081W YIL086CP40503 102 aa1.91□□□□□ -2.1
SRB8YCR081W YPL278CQ08990 100 aa1.91□□□□□ -2.1
SRB8YCR081W NCE102Q12207 173 aaRIP-Chip data1.91□□□□□ -2.1not detected
SRB8YCR081W YIL046W-AQ3E7Z4 54 aa1.91□□□□□ -2.1
SRB8YCR081W RTC6O14464 93 aa1.91□□□□□ -2.1
SRB8YCR081W YBR027CP38220 110 aa1.91□□□□□ -2.1
SRB8YCR081W POR2P40478 281 aa1.91□□□□□ -2.1
SRB8YCR081W YNL146C-AQ3E7Z1 64 aa1.91□□□□□ -2.1
SRB8YCR081W YNL042W-BQ3E7Z2 85 aa1.91□□□□□ -2.1
SRB8YCR081W YMR122W-AQ3E842 84 aa1.9□□□□□ -2.1
SRB8YCR081W RPS27AP35997 82 aaKnown RBP1.9□□□□□ -2.11
SRB8YCR081W RPS27BP38711 82 aa1.9□□□□□ -2.11
SRB8YCR081W DDR48P18899 430 aaKnown RBP1.9□□□□□ -2.11
SRB8YCR081W SIP18P50263 79 aa1.89□□□□□ -2.11
SRB8YCR081W HOR7Q05827 59 aa1.89□□□□□ -2.11
SRB8YCR081W MRP10O75012 95 aa1.89□□□□□ -2.11
SRB8YCR081W CDC39P25655 2108 aaKnown RBP1.89□□□□□ -2.11
SRB8YCR081W YHR125WP38831 101 aa1.89□□□□□ -2.11
SRB8YCR081W YER145C-AA0A023PYF4 145 aa1.88□□□□□ -2.11
SRB8YCR081W SDH6Q3E785 79 aa1.88□□□□□ -2.11
SRB8YCR081W VAM10Q08474 114 aa1.88□□□□□ -2.11
SRB8YCR081W YIL156W-BQ2V2P4 73 aa1.88□□□□□ -2.11
SRB8YCR081W YNL162W-AQ3E7A8 72 aa1.88□□□□□ -2.11
SRB8YCR081W ECM19Q06011 112 aa1.88□□□□□ -2.11
SRB8YCR081W YMR001C-AQ8TGS9 76 aa1.88□□□□□ -2.11
SRB8YCR081W YBR219CP38317 127 aa1.87□□□□□ -2.11
SRB8YCR081W YMR105W-AQ8TGS8 64 aa1.87□□□□□ -2.11
SRB8YCR081W YDR210WQ03482 75 aa1.87□□□□□ -2.11
SRB8YCR081W BLM10P43583 2143 aa1.86□□□□□ -2.11
SRB8YCR081W YER175W-AQ8TGU4 54 aa1.86□□□□□ -2.11
SRB8YCR081W AQY2P0CD90 149 aa1.86□□□□□ -2.11
SRB8YCR081W YDR114CQ04597 100 aa1.86□□□□□ -2.11
SRB8YCR081W YCR095W-AQ3E787 52 aa1.86□□□□□ -2.11
SRB8YCR081W YCR041WP37265 110 aa1.86□□□□□ -2.11
SRB8YCR081W YER084WP40057 128 aa1.86□□□□□ -2.11
SRB8YCR081W YDL012CQ12489 107 aa1.86□□□□□ -2.11
SRB8YCR081W YOL097W-AQ3E7Y9 61 aa1.86□□□□□ -2.11
SRB8YCR081W DDR2P89113 61 aa1.85□□□□□ -2.11
SRB8YCR081W YBR182C-AQ8TGU6 64 aa1.85□□□□□ -2.11
SRB8YCR081W YOR034C-AQ3E735 80 aa1.85□□□□□ -2.11
SRB8YCR081W YOR011W-AQ3E807 68 aa1.85□□□□□ -2.11
SRB8YCR081W YGR025WP53216 100 aa1.84□□□□□ -2.11
SRB8YCR081W YBR230W-AQ3E762 66 aa1.84□□□□□ -2.11
SRB8YCR081W BEM2P39960 2167 aaKnown RBP1.84□□□□□ -2.12
SRB8YCR081W YHR213W-BQ8TGK1 99 aa1.83□□□□□ -2.12
SRB8YCR081W YDR010CQ12426 110 aa1.83□□□□□ -2.12
SRB8YCR081W YLR157W-DP0CE99 70 aa1.83□□□□□ -2.12
SRB8YCR081W RPC10P40422 70 aa1.83□□□□□ -2.12
SRB8YCR081W YNL122CP53921 115 aaPredicted RBP1.83□□□□□ -2.12
SRB8YCR081W YDR034W-BQ6Q5X2 51 aa1.83□□□□□ -2.12
SRB8YCR081W YLR122CQ12312 125 aa1.82□□□□□ -2.12
SRB8YCR081W YJL133C-AQ3E7A3 74 aa1.82□□□□□ -2.12
SRB8YCR081W AUA1P32450 94 aa1.82□□□□□ -2.12
SRB8YCR081W PMP3P87284 55 aa1.82□□□□□ -2.12
SRB8YCR081W YDR461C-AQ2V2P7 80 aa1.81□□□□□ -2.12
SRB8YCR081W YGL014C-AP0C5N1 53 aa1.81□□□□□ -2.12
SRB8YCR081W SNA2P56508 79 aa1.81□□□□□ -2.12
SRB8YCR081W LCL2Q08045 131 aa1.81□□□□□ -2.12
SRB8YCR081W YBL039W-BP0C268 59 aa1.81□□□□□ -2.12
SRB8YCR081W YLR255CO13574 117 aa1.8□□□□□ -2.12
SRB8YCR081W YDR524C-BQ3E6R4 66 aa1.8□□□□□ -2.12
SRB8YCR081W MVB12P42939 101 aa1.8□□□□□ -2.12
SRB8YCR081W YGR240C-AQ3E786 66 aa1.8□□□□□ -2.12
SRB8YCR081W IGD1P43598 195 aa1.8□□□□□ -2.12
SRB8YCR081W RPL38P49167 78 aaKnown RBP1.79□□□□□ -2.12
SRB8YCR081W YJL127C-BQ3E828 52 aa1.79□□□□□ -2.12
SRB8YCR081W YOL085CQ99345 113 aa1.78□□□□□ -2.12
SRB8YCR081W COX8P04039 78 aa1.78□□□□□ -2.12
SRB8YCR081W YAR064WP39563 99 aa1.77□□□□□ -2.13
SRB8YCR081W SEC16P48415 2195 aaKnown RBP1.77□□□□□ -2.13
SRB8YCR081W SPC1P46965 94 aa1.77□□□□□ -2.13
SRB8YCR081W YHR073W-AP0C5N7 58 aa1.76□□□□□ -2.13
SRB8YCR081W YEL014CP39999 101 aa1.76□□□□□ -2.13
SRB8YCR081W RPL33AP05744 107 aaKnown RBP1.75□□□□□ -2.13
SRB8YCR081W RPL33BP41056 107 aaKnown RBP1.75□□□□□ -2.13
SRB8YCR081W RPL37BP51402 88 aaKnown RBP1.75□□□□□ -2.13
SRB8YCR081W YIL102CP40488 101 aa1.75□□□□□ -2.13
SRB8YCR081W TOM1Q03280 3268 aa1.75□□□□□ -2.13
SRB8YCR081W RPL39P04650 51 aa1.74□□□□□ -2.13
SRB8YCR081W YPR195CQ06594 109 aa1.74□□□□□ -2.13
SRB8YCR081W YDR115WQ04598 105 aa1.73□□□□□ -2.13
SRB8YCR081W YGR146C-AQ8TGT9 53 aa1.73□□□□□ -2.13
SRB8YCR081W GIS2P53849 153 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
SRB8YCR081W YHR032W-AP0C5N6 59 aa1.71□□□□□ -2.14
SRB8YCR081W YCL042WP25572 119 aa1.71□□□□□ -2.14
SRB8YCR081W YOR072WQ08486 104 aa1.71□□□□□ -2.14
SRB8YCR081W YOR394C-AQ8TGJ0 55 aa1.71□□□□□ -2.14
SRB8YCR081W YFL067WP43537 175 aa1.7□□□□□ -2.14
SRB8YCR081W TAR1Q8TGM6 124 aa1.7□□□□□ -2.14
SRB8YCR081W Q0032Q9ZZX7 96 aa1.69□□□□□ -2.14
SRB8YCR081W SGF11Q03067 99 aa1.69□□□□□ -2.14
SRB8YCR081W YGL041C-BQ3E750 60 aa1.68□□□□□ -2.14
SRB8YCR081W YER078W-AQ3E7A2 54 aa1.68□□□□□ -2.14
SRB8YCR081W CUP1-1P0CX80 61 aa1.67□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms